Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014494 Solanum tuberosum HOM05D003889 ORTHO05D004407 1.0e-82 310.1 161 100.0
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 1.5e-73 279.6 158 93.0
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 1.9e-73 279.3 159 92.5
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 1.2e-72 276.6 158 91.8
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 3.1e-71 271.9 158 90.5
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 3.1e-71 271.9 158 91.1
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 6.4e-69 264.2 158 88.6
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 4.6e-67 258.1 158 84.2
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 6.0e-67 257.7 158 82.3
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.0e-66 256.9 158 84.2
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 7.3e-65 250.8 158 82.3
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 9.6e-65 250.4 158 82.3
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 1.2e-64 250.0 158 82.9
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 1.6e-64 249.6 158 79.7
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 2.1e-64 249.2 158 81.6
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 2.1e-64 249.2 158 81.6
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 2.1e-64 249.2 158 81.6
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 3.6e-64 248.4 158 82.9
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 3.6e-64 248.4 158 82.9
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 3.6e-64 248.4 158 79.7
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 4.7e-64 248.1 159 81.8
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 6.2e-64 247.7 158 80.4
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 8.1e-64 247.3 158 81.0
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 1.1e-63 246.9 158 81.0
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 1.1e-63 246.9 158 81.6
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 1.1e-63 246.9 158 80.4
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 1.1e-63 246.9 158 82.3
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 1.4e-63 246.5 158 79.7
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 1.4e-63 246.5 158 80.4
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 1.8e-63 246.1 158 80.4
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 1.8e-63 246.1 158 80.4
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 1.8e-63 246.1 158 80.4
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 2.4e-63 245.7 156 80.8
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 2.4e-63 245.7 156 80.8
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 3.1e-63 245.4 158 80.4
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 6.9e-63 244.2 160 80.6
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 9.0e-63 243.8 158 80.4
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 9.0e-63 243.8 158 79.7
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 1.2e-62 243.4 160 78.8
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 2.6e-62 242.3 183 73.2
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 2.6e-62 242.3 158 79.1
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 3.4e-62 241.9 158 79.1
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 4.4e-62 241.5 158 79.1
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 5.8e-62 241.1 158 78.5
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 5.8e-62 241.1 158 78.5
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 5.8e-62 241.1 158 77.2
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 7.6e-62 240.7 158 79.1
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 7.6e-62 240.7 158 79.1
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 9.9e-62 240.4 158 79.7
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 1.3e-61 240.0 158 77.8
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.3e-61 240.0 158 77.8
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.3e-61 240.0 158 77.8
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 1.7e-61 239.6 158 78.5
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 2.2e-61 239.2 158 79.1
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 2.2e-61 239.2 158 79.7
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 2.9e-61 238.8 158 78.5
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 2.9e-61 238.8 158 77.2
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 3.8e-61 238.4 158 77.2
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 3.8e-61 238.4 158 79.7
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 3.8e-61 238.4 158 79.1
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 4.9e-61 238.0 158 78.5
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 8.4e-61 237.3 159 77.4
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 1.1e-60 236.9 158 78.5
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 3.2e-60 235.3 158 75.9
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 4.2e-60 235.0 158 78.5
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 7.1e-60 234.2 158 77.2
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 9.3e-60 233.8 158 77.2
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 2.1e-59 232.6 158 77.2
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 2.7e-59 232.3 156 77.6
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 3.5e-59 231.9 158 77.2
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 6.0e-59 231.1 157 76.4
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 6.0e-59 231.1 158 77.2
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 1.0e-58 230.3 158 74.7
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 1.0e-58 230.3 137 83.2
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 1.3e-58 229.9 157 75.8
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 1.3e-58 229.9 158 77.2
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.3e-58 229.2 158 77.2
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 2.3e-58 229.2 158 76.6
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 3.9e-58 228.4 158 76.6
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 5.1e-58 228.0 158 76.6
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 6.6e-58 227.6 157 75.2
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 6.6e-58 227.6 158 74.7
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 8.7e-58 227.3 157 75.8
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 1.1e-57 226.9 158 75.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.5e-57 226.5 158 75.9
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.5e-57 226.5 158 75.9
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 1.9e-57 226.1 157 75.8
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 2.5e-57 225.7 135 83.0
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 3.3e-57 225.3 158 75.3
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 3.3e-57 225.3 160 75.0
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 3.3e-57 225.3 160 75.0
SHI18632 Sapria himalayana HOM05D003889 ORTHO05D004407 3.3e-57 225.3 158 74.1
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 4.3e-57 224.9 158 74.7
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 9.6e-57 223.8 158 74.7
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 4.8e-56 221.5 158 74.7
CSS0036613 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.1e-55 220.3 170 74.1
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 1.1e-55 220.3 157 73.9
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 1.8e-55 219.5 165 71.5
CSS0044117 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.2e-54 216.9 179 70.4
CSS0042394 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 7.6e-54 214.2 180 69.4
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 3.5e-51 205.3 158 69.6
Pp3c1_24760 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.5e-46 189.9 156 62.8
SEGI_30069 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 7.6e-46 187.6 132 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 1.1e-44 183.7 159 62.9
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 1.3e-42 176.8 165 58.8
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.6e-40 169.9 159 60.4
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 4.1e-31 138.7 127 60.6
Lsat_1_v5_gn_4_66900 Lactuca sativa HOM05D003889 ORTHO05D004407 2.6e-30 136.0 95 73.7
CSS0033543 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 4.5e-30 135.2 87 80.5
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 7.6e-30 134.4 95 72.6
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 1.2e-27 127.1 174 44.3
CBR_g998 Chara braunii HOM05D003889 ORTHO05D004407 3.0e-26 122.5 89 66.3
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 3.1e-23 112.5 197 39.1
Aqoxy520s001 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 2.6e-22 109.4 70 80.0
Cre08.g384390 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 2.9e-21 105.9 116 54.3
Actinidia24572 Actinidia chinensis HOM05D003889 ORTHO05D004407 1.6e-19 100.1 64 79.7
PRCOL_00006968 Prasinoderma coloniale HOM05D003889 ORTHO05D004407 8.8e-18 94.4 182 36.8
SEGI_15374 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 2.6e-17 92.8 67 70.1
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 6.9e-15 84.7 100 52.0
Lsat_1_v5_gn_6_75601 Lactuca sativa HOM05D003889 ORTHO05D004407 2.9e-13 79.3 49 75.5
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 8.8e-10 67.8 121 39.7


User provided reference genes

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