Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014306 Solanum tuberosum HOM05D000068 ORTHO05D008004 4.6e-112 407.9 206 100.0
Sopen03g005200 Solanum pennellii HOM05D000068 ORTHO05D008004 6.6e-103 377.5 206 94.2
Solyc03g026310.4 Solanum lycopersicum HOM05D000068 ORTHO05D008004 1.3e-101 373.2 206 93.2
Nitab4.5_0000832g0200 Nicotiana tabacum HOM05D000068 ORTHO05D008004 5.1e-79 298.1 206 75.2
Peaxi162Scf00648g00223 Petunia axillaris HOM05D000068 ORTHO05D008004 7.9e-72 274.2 206 68.9
Nitab4.5_0008764g0030 Nicotiana tabacum HOM05D000068 ORTHO05D008004 1.6e-69 266.5 205 68.3
CAN.G548.19 Capsicum annuum HOM05D000068 ORTHO05D008004 9.7e-54 214.2 140 80.0
Dinv35171 Davidia involucrata HOM05D000068 ORTHO05D008004 1.4e-52 210.3 205 52.7
Migut.F00384 Erythranthe guttata HOM05D000068 ORTHO05D008004 9.1e-52 207.6 210 54.3
MSTRG.27140 Avicennia marina HOM05D000068 ORTHO05D008004 1.2e-51 207.2 202 55.0
MD07G1262600 Malus domestica HOM05D000068 ORTHO05D008004 2.2e-50 203.0 202 54.5
Haze_13771 Corylus avellana HOM05D000068 ORTHO05D008004 3.8e-50 202.2 199 53.3
Lsat_1_v5_gn_9_53861 Lactuca sativa HOM05D000068 ORTHO05D008004 8.5e-50 201.1 202 54.5
HanXRQChr15g0486321 Helianthus annuus HOM05D000068 ORTHO05D008004 2.5e-49 199.5 209 52.6
Nn1g01334 Nelumbo nucifera HOM05D000068 ORTHO05D008004 6.1e-48 194.9 174 55.7
Cc02_g03450 Coffea canephora HOM05D000068 ORTHO05D008004 1.0e-47 194.1 154 60.4
Hma1.2p1_0270F.1_g108530 Hydrangea macrophylla HOM05D000068 ORTHO05D008004 1.0e-47 194.1 145 64.8
Potri.015G136700 Populus trichocarpa HOM05D000068 ORTHO05D008004 2.3e-47 193.0 209 50.2
FvH4_7g28920 Fragaria vesca HOM05D000068 ORTHO05D008004 4.0e-47 192.2 203 51.2
FAN01G0643 Fragaria x ananassa HOM05D000068 ORTHO05D008004 4.0e-47 192.2 202 52.5
FAN06G1335 Fragaria x ananassa HOM05D000068 ORTHO05D008004 4.0e-47 192.2 203 51.2
Oeu047984.1 Olea europaea HOM05D000068 ORTHO05D008004 6.7e-47 191.4 207 52.7
FAN03G2985 Fragaria x ananassa HOM05D000068 ORTHO05D008004 8.8e-47 191.0 203 51.2
QL09p015467 Quercus lobata HOM05D000068 ORTHO05D008004 8.8e-47 191.0 184 56.0
SGA_v2.0_scaffold2G01086 Striga asiatica HOM05D000068 ORTHO05D008004 8.8e-47 191.0 149 61.7
FAN06G0981 Fragaria x ananassa HOM05D000068 ORTHO05D008004 1.2e-46 190.7 203 51.2
Lj1A990G57 Lonicera japonica HOM05D000068 ORTHO05D008004 1.5e-46 190.3 211 52.6
RcHm_v2.0_Chr1g0376591 Rosa chinensis HOM05D000068 ORTHO05D008004 2.6e-46 189.5 171 55.0
Atru.chr1.535 Acer truncatum HOM05D000068 ORTHO05D008004 5.7e-46 188.3 206 50.0
Sabra15G0148400 Salix brachista HOM05D000068 ORTHO05D008004 7.5e-46 188.0 175 52.0
SalBow4G2416 Salvia bowleyana HOM05D000068 ORTHO05D008004 7.5e-46 188.0 141 65.2
Manes.06G142900 Manihot esculenta HOM05D000068 ORTHO05D008004 6.3e-45 184.9 202 52.0
ECA232G0015 Erigeron canadensis HOM05D000068 ORTHO05D008004 1.1e-44 184.1 151 60.3
Ciclev10004389m.g Citrus clementina HOM05D000068 ORTHO05D008004 1.4e-44 183.7 206 51.0
Duzib084G1174 Durio zibethinus HOM05D000068 ORTHO05D008004 2.4e-44 183.0 196 50.5
ClCG01G005380 Citrullus lanatus HOM05D000068 ORTHO05D008004 4.1e-44 182.2 211 49.3
CiPaw.04G068300 Carya illinoinensis HOM05D000068 ORTHO05D008004 7.0e-44 181.4 187 49.7
CSS0031874 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 1.2e-43 180.6 206 50.0
GSVIVG01010634001 Vitis vinifera HOM05D000068 ORTHO05D008004 1.2e-43 180.6 170 55.9
Aqoxy7G00466 Aquilegia oxysepala HOM05D000068 ORTHO05D008004 2.0e-43 179.9 203 47.8
CSS0037171 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 1.0e-42 177.6 163 55.2
arahy.Tifrunner.gnm1.ann1.4DG32P Arachis hypogaea HOM05D000068 ORTHO05D008004 1.3e-42 177.2 209 45.0
Cpa.g.sc107.1 Carica papaya HOM05D000068 ORTHO05D008004 1.7e-42 176.8 208 45.7
TWI23G1186 Tripterygium wilfordii HOM05D000068 ORTHO05D008004 2.2e-42 176.4 167 53.3
CsaV3_5G005630 Cucumis sativus L. HOM05D000068 ORTHO05D008004 5.0e-42 175.3 204 51.5
Thecc.03G169600 Theobroma cacao HOM05D000068 ORTHO05D008004 6.5e-42 174.9 187 52.9
arahy.Tifrunner.gnm1.ann1.9PJ8QM Arachis hypogaea HOM05D000068 ORTHO05D008004 8.5e-42 174.5 209 45.0
BcaB03g12468 Brassica carinata HOM05D000068 ORTHO05D008004 8.5e-42 174.5 190 50.0
THA.LOC104798735 Tarenaya hassleriana HOM05D000068 ORTHO05D008004 1.5e-41 173.7 196 48.0
Prupe.2G289200 Prunus persica HOM05D000068 ORTHO05D008004 2.5e-41 172.9 175 53.7
Sp7g23500 Schrenkiella parvula HOM05D000068 ORTHO05D008004 3.2e-41 172.6 190 48.4
Gohir.D08G104800 Gossypium hirsutum HOM05D000068 ORTHO05D008004 5.5e-41 171.8 203 48.3
Gorai.004G111900 Gossypium raimondii HOM05D000068 ORTHO05D008004 5.5e-41 171.8 203 48.3
PGR042G3668 Punica granatum HOM05D000068 ORTHO05D008004 5.5e-41 171.8 146 56.8
BcaC07g38190 Brassica carinata HOM05D000068 ORTHO05D008004 7.2e-41 171.4 153 54.9
A08p21170 Brassica napus HOM05D000068 ORTHO05D008004 7.2e-41 171.4 153 54.9
BolC8t48610H Brassica oleracea HOM05D000068 ORTHO05D008004 7.2e-41 171.4 153 54.9
BraA08t34066Z Brassica rapa HOM05D000068 ORTHO05D008004 7.2e-41 171.4 153 54.9
Carub.0007s1553 Capsella rubella HOM05D000068 ORTHO05D008004 7.2e-41 171.4 199 49.7
PSO478G3760 Papaver somniferum HOM05D000068 ORTHO05D008004 7.2e-41 171.4 174 51.1
COL.COLO4_14251 Corchorus olitorius HOM05D000068 ORTHO05D008004 1.2e-40 170.6 213 46.0
Actinidia34073 Actinidia chinensis HOM05D000068 ORTHO05D008004 1.6e-40 170.2 188 48.9
AL7G27640 Arabidopsis lyrata HOM05D000068 ORTHO05D008004 2.1e-40 169.9 167 53.3
Gohir.A08G094300 Gossypium hirsutum HOM05D000068 ORTHO05D008004 2.1e-40 169.9 211 47.9
Sed0012146 Sechium edule HOM05D000068 ORTHO05D008004 2.7e-40 169.5 208 47.1
AT4G25450 Arabidopsis thaliana HOM05D000068 ORTHO05D008004 4.7e-40 168.7 195 49.7
Aa31sc521G30 Aethionema arabicum HOM05D000068 ORTHO05D008004 6.1e-40 168.3 147 55.8
CARHR232880 Cardamine hirsuta HOM05D000068 ORTHO05D008004 6.1e-40 168.3 198 48.5
Thhalv10024541m.g Eutrema salsugineum HOM05D000068 ORTHO05D008004 1.0e-39 167.5 189 46.0
Actinidia32904 Actinidia chinensis HOM05D000068 ORTHO05D008004 1.4e-39 167.2 206 47.6
CSS0023345 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 1.4e-39 167.2 168 52.4
CSS0038988 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 1.4e-39 167.2 168 52.4
Sed0022360 Sechium edule HOM05D000068 ORTHO05D008004 5.2e-39 165.2 206 44.2
vmacro06750 Vaccinium macrocarpon HOM05D000068 ORTHO05D008004 6.8e-39 164.9 221 43.9
Rhsim03G0176200 Rhododendron simsii HOM05D000068 ORTHO05D008004 8.8e-39 164.5 214 44.9
DCAR_018154 Daucus carota HOM05D000068 ORTHO05D008004 1.2e-38 164.1 183 49.7
Lj2g0015007 Lotus japonicus HOM05D000068 ORTHO05D008004 1.5e-38 163.7 187 47.6
Lalb_Chr03g0034221 Lupinus albus HOM05D000068 ORTHO05D008004 3.4e-38 162.5 205 45.9
CANSAT21G0450 Cannabis sativa HOM05D000068 ORTHO05D008004 9.8e-38 161.0 198 46.0
Ca_26265_v3 Cicer arietinum L. HOM05D000068 ORTHO05D008004 2.2e-37 159.8 144 54.9
Psat1g105160 Pisum sativum HOM05D000068 ORTHO05D008004 2.8e-37 159.5 146 55.5
Glyma.09G147400 Glycine max HOM05D000068 ORTHO05D008004 3.7e-37 159.1 144 55.6
Medtr6g465300 Medicago truncatula HOM05D000068 ORTHO05D008004 3.7e-37 159.1 195 46.7
HPP92_026378 Vanilla planifolia HOM05D000068 ORTHO05D008004 8.3e-37 157.9 201 43.8
Dinv28495 Davidia involucrata HOM05D000068 ORTHO05D008004 2.4e-36 156.4 155 49.7
Sc13g0008410 Simmondsia chinensis HOM05D000068 ORTHO05D008004 4.1e-36 155.6 187 46.0
PSO782G0014 Papaver somniferum HOM05D000068 ORTHO05D008004 7.0e-36 154.8 174 46.6
Eucgr.A02836 Eucalyptus grandis HOM05D000068 ORTHO05D008004 3.5e-35 152.5 115 61.7
VMungo0464G1471 Vigna mungo HOM05D000068 ORTHO05D008004 3.5e-35 152.5 149 52.3
EL10Ac3g05681 Beta vulgaris HOM05D000068 ORTHO05D008004 1.7e-34 150.2 172 47.1
Phvul.004G122300 Phaseolus vulgaris HOM05D000068 ORTHO05D008004 2.3e-34 149.8 144 52.8
Zm00001eb306760 Zea mays HOM05D000068 ORTHO05D008004 2.9e-34 149.4 147 51.0
Os07g0464600 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D008004 2.8e-32 142.9 146 50.0
ATR0757G104 Amborella trichopoda HOM05D000068 ORTHO05D008004 1.4e-31 140.6 147 49.7
FAN03G0508 Fragaria x ananassa HOM05D000068 ORTHO05D008004 1.5e-30 137.1 203 44.3
AUR62021245 Chenopodium quinoa HOM05D000068 ORTHO05D008004 7.5e-30 134.8 166 45.2
CDE11G1240 Ceratophyllum demersum HOM05D000068 ORTHO05D008004 9.8e-30 134.4 110 54.5
SEGI_37609 Sequoiadendron giganteum HOM05D000068 ORTHO05D008004 9.8e-30 134.4 163 43.6
Pp3c16_7170 Physcomitrium patens HOM05D000068 ORTHO05D008004 1.3e-29 134.0 156 41.0
MBI04_g45297_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D008004 6.3e-29 131.7 100 56.0
Mapoly0091s0010 Marchantia polymorpha HOM05D000068 ORTHO05D008004 5.0e-26 122.1 165 43.0
TAR375G1046 Trochodendron aralioides HOM05D000068 ORTHO05D008004 1.2e-22 110.9 71 71.8
SMO137G0363 Selaginella moellendorffii HOM05D000068 ORTHO05D008004 2.6e-22 109.8 107 45.8
TPR.G9189 Trifolium pratense HOM05D000068 ORTHO05D008004 2.2e-21 106.7 90 58.9
Ah.13g067960 Amaranthus hybridus HOM05D001521 ORTHO05D001342 6.4e-21 105.1 175 37.1
SalBow8G3732 Salvia bowleyana HOM05D000068 ORTHO05D008004 5.4e-20 102.1 65 75.4
CBR_g55235 Chara braunii HOM05D000068 ORTHO05D008004 1.6e-19 100.5 147 37.4
AagrBONN_evm.TU.Sc2ySwM_369.367 Anthoceros agrestis HOM05D000068 ORTHO05D008004 2.0e-19 100.1 73 58.9
CDE02G3487 Ceratophyllum demersum HOM05D000068 ORTHO05D008004 3.5e-19 99.4 69 63.8
Hund04697 Selenicereus undatus HOM05D000068 ORTHO05D008004 1.1e-17 94.4 107 48.6
Peaxi162Scf00038g00112 Petunia axillaris HOM05D014612 ORTHO05D008004 3.4e-14 82.8 95 49.5
MCO12G148 Micromonas commoda HOM05D000068 ORTHO05D008004 2.9e-13 79.7 102 39.2
TPR.G20926 Trifolium pratense HOM05D000068 ORTHO05D008004 1.6e-08 63.9 138 34.8


User provided reference genes

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