Gene: COL.COLO4_14251
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_14251
- Transcript Identifier COL.rna13037
- Gene Type Coding gene
- Location AWUE01015402.1 : 21389-26529 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D008004
- #Genes/#Species 124/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna13037
- GenBank OMO97932.1
- id gene14223
- gene_name COLO4_14251
- uniprot A0A1R3JSQ4
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | GOA Database | ABC-type transporter activity | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G25450 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT4G25450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR039421 | Type 1 protein exporter |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 24.1.3.1.1 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter |