Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 8.6e-218 760.0 373 100.0
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 6.2e-216 753.8 373 99.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 3.1e-215 751.5 373 98.9
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 5.1e-202 707.6 373 93.0
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.7e-197 692.6 384 88.8
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.9e-196 689.1 373 90.6
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 2.4e-196 688.7 373 90.1
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.6e-192 676.0 373 87.1
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.1e-191 673.3 373 87.9
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 5.4e-188 661.0 375 85.9
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 7.1e-188 660.6 375 85.9
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.2e-187 659.8 373 86.1
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.2e-187 659.8 374 84.5
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.6e-187 659.4 373 85.3
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.0e-186 656.8 373 85.3
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.0e-186 656.8 373 85.3
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 1.8e-186 656.0 373 84.7
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 5.1e-186 654.4 373 85.5
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.7e-186 653.7 373 85.5
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.9e-185 652.5 373 85.0
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 7.4e-185 650.6 373 84.5
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.3e-184 649.8 373 84.2
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.6e-184 649.4 373 84.7
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.8e-184 648.7 374 85.8
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 6.2e-184 647.5 373 85.0
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 8.1e-184 647.1 373 83.9
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 8.1e-184 647.1 373 84.7
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.8e-183 646.0 373 84.2
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 3.1e-183 645.2 373 84.2
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 4.0e-183 644.8 373 84.5
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.0e-183 644.8 373 84.5
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 5.3e-183 644.4 373 83.6
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 6.9e-183 644.0 373 83.6
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 9.0e-183 643.7 370 84.6
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.5e-182 642.9 371 82.2
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 2.6e-182 642.1 374 83.2
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 7.6e-182 640.6 374 82.9
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.6e-182 640.6 373 83.1
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.7e-181 639.4 374 82.9
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.7e-181 639.4 373 82.6
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 2.2e-181 639.0 387 81.4
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.9e-181 638.6 373 83.6
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 4.9e-181 637.9 373 83.6
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.4e-181 637.5 371 83.8
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.1e-180 636.7 377 82.0
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.9e-180 636.0 373 82.8
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 4.2e-180 634.8 373 83.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 4.2e-180 634.8 373 83.4
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 4.2e-180 634.8 373 83.1
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.5e-180 634.4 374 82.9
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 7.1e-180 634.0 373 83.1
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 82.8
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-179 632.9 373 81.8
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-179 632.9 373 81.8
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 2.1e-179 632.5 368 83.7
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.1e-179 632.5 374 81.8
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.1e-179 632.5 373 83.4
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.7e-179 632.1 373 81.8
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 2.7e-179 632.1 373 81.8
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 4.6e-179 631.3 380 82.4
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.0e-179 630.9 373 82.8
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 6.0e-179 630.9 373 82.3
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 6.0e-179 630.9 373 81.5
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.0e-178 630.2 373 82.8
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.3e-178 629.8 371 83.3
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.3e-178 629.0 374 81.8
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.3e-178 629.0 373 82.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.3e-178 629.0 373 82.6
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 2.3e-178 629.0 373 81.0
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.3e-178 629.0 400 77.2
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-178 628.2 373 80.4
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-177 626.7 412 76.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 1.9e-177 625.9 371 81.9
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.9e-177 625.9 373 81.5
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 3.3e-177 625.2 373 82.0
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 4.3e-177 624.8 373 81.5
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 4.3e-177 624.8 373 82.3
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 5.6e-177 624.4 373 82.3
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 7.4e-177 624.0 354 85.0
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 7.4e-177 624.0 373 82.0
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 9.6e-177 623.6 366 82.8
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.6e-176 622.9 373 82.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 2.8e-176 622.1 364 83.2
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 3.7e-176 621.7 373 81.2
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.7e-176 621.7 371 81.1
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 4.8e-176 621.3 366 81.4
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 6.2e-176 620.9 366 80.9
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 1.1e-175 620.2 373 80.7
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.1e-175 620.2 374 81.0
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.4e-175 619.0 373 80.7
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.5e-174 616.3 373 80.7
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 2.0e-174 615.9 373 80.4
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.4e-174 615.1 373 80.7
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 5.8e-174 614.4 436 72.7
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 7.6e-174 614.0 373 81.5
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 1.3e-173 613.2 366 81.1
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 2.9e-173 612.1 373 77.7
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 4.9e-173 611.3 373 80.4
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 6.5e-173 610.9 364 80.5
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.9e-172 609.4 373 79.9
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 3.2e-172 608.6 364 79.9
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 3.2e-172 608.6 364 79.9
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 3.2e-172 608.6 364 79.9
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 3.2e-172 608.6 364 79.9
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 3.2e-172 608.6 364 79.9
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 3.2e-172 608.6 373 80.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 5.5e-172 607.8 373 81.5
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 9.3e-172 607.1 371 80.9
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-171 606.3 404 75.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.6e-171 606.3 373 79.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.1e-171 605.9 367 79.6
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.5e-171 605.1 373 79.6
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 4.6e-171 604.7 362 81.2
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 7.9e-171 604.0 359 81.3
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 8.7e-170 600.5 375 80.5
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.5e-169 599.7 353 83.0
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 2.5e-169 599.0 371 79.8
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 5.7e-169 597.8 361 82.0
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 8.2e-168 594.0 373 78.6
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 1.8e-167 592.8 372 78.8
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 7.6e-166 587.4 353 81.6
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 3.8e-165 585.1 371 75.2
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 8.5e-165 583.9 371 75.2
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.2e-163 580.1 373 76.9
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.1e-163 577.8 354 79.9
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.3e-162 576.6 373 77.7
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.9e-162 575.1 377 74.8
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.5e-161 572.4 357 77.9
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 8.2e-160 567.4 354 78.8
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 7.7e-158 560.8 368 74.5
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.2e-157 559.3 368 73.9
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 3.8e-157 558.5 363 75.2
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 4.2e-156 555.1 361 75.6
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 7.2e-156 554.3 369 72.6
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 7.9e-155 550.8 370 73.5
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.9e-151 537.7 365 72.3
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.2e-149 532.7 373 66.8
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 6.5e-149 531.2 372 68.0
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.1e-148 530.4 373 67.3
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 5.5e-148 528.1 397 69.5
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 9.4e-148 527.3 374 68.2
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.2e-147 526.9 364 70.3
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 8.8e-146 520.8 372 66.4
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.5e-145 520.0 291 86.6
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 7.4e-145 517.7 374 67.1
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 2.9e-141 505.8 365 67.1
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 6.7e-138 494.6 286 83.6
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 4.4e-137 491.9 279 84.2
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.4e-137 491.9 328 73.2
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 1.3e-136 490.3 375 66.9
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.7e-136 490.0 369 64.0
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 3.1e-135 485.7 361 67.0
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 2.0e-134 483.0 278 84.2
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.7e-134 482.6 349 71.3
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.1e-132 477.2 331 72.8
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.2e-131 473.8 280 81.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 1.2e-129 467.2 279 81.4
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.5e-129 466.8 281 80.8
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.5e-124 449.5 389 57.8
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.2e-121 440.7 242 86.8
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.9e-116 423.3 370 55.7
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 9.5e-116 421.0 372 55.6
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 2.1e-115 419.9 276 75.4
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 4.0e-114 415.6 402 52.2
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 4.4e-113 412.1 273 72.2
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 7.0e-111 404.8 285 68.8
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.8e-91 339.7 276 63.8
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.1e-90 336.3 197 79.7
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 4.0e-90 335.9 225 74.2
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.9e-90 334.7 198 82.8
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.7e-85 320.5 180 85.6
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.3e-68 263.1 171 77.8
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 5.3e-58 229.2 268 51.9
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 5.9e-49 199.1 368 33.4
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 2.2e-43 180.6 120 72.5
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 4.8e-43 179.5 452 29.4
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.1e-42 178.3 148 64.2
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.4e-42 177.9 402 29.1
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 5.3e-42 176.0 113 75.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 5.3e-42 176.0 120 70.8
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 2.6e-36 157.1 115 66.1
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 5.3e-34 149.4 297 31.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 7.4e-28 129.0 84 72.6
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 5.9e-09 66.2 49 67.3
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 5.0e-08 63.2 68 48.5


User provided reference genes

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