Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 0.0e+00 1119.8 558 100.0
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 0.0e+00 1080.1 558 96.4
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 0.0e+00 1075.1 561 95.7
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 6.1e-260 900.6 554 82.1
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.8e-248 862.4 474 90.3
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 2.2e-201 706.1 569 67.1
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 2.1e-180 636.3 567 60.0
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.1e-176 621.3 535 60.2
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 7.4e-173 611.3 533 59.8
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 4.8e-172 608.6 546 59.9
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 8.2e-172 607.8 564 57.3
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.8e-171 606.7 562 57.3
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 5.3e-171 605.1 555 57.1
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.5e-170 603.6 559 58.7
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.0e-170 603.2 616 54.4
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.2e-169 599.7 563 57.4
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 5.0e-169 598.6 557 58.7
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 6.5e-169 598.2 574 56.6
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 6.5e-169 598.2 540 58.5
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 4.2e-168 595.5 537 58.1
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 4.6e-167 592.0 565 57.7
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.8e-166 590.1 542 57.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 8.8e-166 587.8 621 53.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 2.0e-165 586.6 540 57.8
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 3.3e-165 585.9 566 56.0
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 4.8e-164 582.0 541 56.4
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 6.9e-163 578.2 546 56.6
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.2e-162 577.4 526 56.3
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.5e-162 577.0 563 55.6
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 4.5e-162 575.5 574 55.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 8.5e-161 571.2 551 55.2
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.4e-160 570.5 547 57.0
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.6e-159 567.0 536 56.0
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 3.0e-158 562.8 532 56.6
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 3.9e-158 562.4 546 55.1
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 5.1e-158 562.0 539 55.7
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 6.7e-158 561.6 583 53.3
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.1e-157 560.8 541 54.5
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 4.4e-157 558.9 526 55.7
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 3.7e-156 555.8 568 54.2
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.4e-155 553.9 543 54.1
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.4e-155 553.1 540 54.3
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 5.3e-155 552.0 544 56.1
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 9.1e-155 551.2 534 54.9
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.5e-154 550.4 525 57.1
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 3.5e-154 549.3 533 56.1
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 4.5e-154 548.9 526 54.8
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 4.5e-154 548.9 529 54.6
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 1.0e-153 547.7 550 53.6
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.3e-153 547.4 542 55.9
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.2e-151 540.8 556 54.7
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 5.2e-150 535.4 465 61.3
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 6.7e-150 535.0 570 51.6
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.1e-149 534.3 524 56.1
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.0e-149 533.5 524 55.5
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.1e-147 527.7 540 55.2
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 2.6e-146 523.1 528 54.4
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.0e-145 521.2 527 53.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 8.5e-145 518.1 536 51.7
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 8.5e-145 518.1 422 62.6
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-144 517.3 536 51.7
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.9e-144 516.9 571 50.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 5.5e-144 515.4 505 56.8
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 7.2e-144 515.0 520 53.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.1e-143 513.5 530 51.3
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 3.6e-143 512.7 533 51.6
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.4e-142 510.8 536 51.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.3e-142 510.0 600 48.7
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 3.0e-142 509.6 526 51.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 1.5e-141 507.3 536 50.2
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 2.0e-141 506.9 528 52.1
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 2.0e-141 506.9 530 51.1
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 2.0e-141 506.9 530 51.1
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 2.6e-141 506.5 537 51.6
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 4.4e-141 505.8 530 50.9
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 4.4e-141 505.8 531 51.6
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 4.4e-141 505.8 539 51.6
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 7.5e-141 505.0 524 51.5
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 2.2e-140 503.4 580 50.2
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.8e-140 503.1 527 51.4
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.5e-136 490.7 544 48.5
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 4.2e-136 489.2 531 49.9
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.2e-135 487.6 536 49.1
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 6.1e-135 485.3 538 50.9
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 2.6e-133 479.9 549 49.4
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 8.3e-132 474.9 530 49.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.1e-131 474.6 560 48.8
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 7.0e-131 471.9 441 57.4
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.3e-129 467.6 385 62.9
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 3.3e-128 463.0 496 50.2
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 9.5e-128 461.5 484 53.5
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.2e-126 455.7 521 50.9
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.6e-125 453.4 557 46.7
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.6e-117 426.8 385 56.6
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 7.5e-117 425.2 337 65.6
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 6.4e-116 422.2 557 42.5
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.0e-115 418.7 254 76.8
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 8.1e-111 405.2 550 42.5
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.5e-104 384.4 536 39.2
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-104 384.0 253 70.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 8.1e-95 352.1 450 46.4
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 5.6e-88 329.3 416 47.6
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 2.8e-87 327.0 211 72.0
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 4.8e-87 326.2 291 59.8
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 6.4e-84 315.8 253 58.5
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.4e-83 313.9 212 70.8
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 2.0e-77 294.3 460 38.5
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 8.4e-68 262.3 246 56.5
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 2.2e-55 221.1 503 30.0
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.3e-54 216.5 247 44.1
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 8.2e-47 192.6 178 56.7
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.3e-44 185.3 258 44.2
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 3.6e-34 150.6 231 41.1
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 3.0e-33 147.5 214 40.7
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.3e-32 144.1 149 50.3
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.5e-32 142.9 291 33.0
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 5.9e-29 133.3 123 53.7
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 2.9e-28 131.0 106 65.1
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 2.3e-25 121.3 317 29.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.3e-23 115.5 257 35.4
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 2.2e-23 114.8 210 36.2
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.0e-20 103.6 158 41.8
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 8.5e-20 102.8 136 42.6
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.0e-16 91.7 140 38.6
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 7.5e-16 89.7 44 90.9
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.2e-15 88.2 170 35.9
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.3e-15 86.7 101 43.6
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.7e-12 78.6 162 37.0
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 6.6e-12 76.6 65 58.5
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 8.6e-12 76.3 66 53.0
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 9.8e-08 62.8 39 71.8
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-06 58.5 111 33.3


User provided reference genes

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