Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007128 Solanum tuberosum HOM05D004585 ORTHO05D005640 2.8e-120 435.3 218 100.0
Sopen06g031130 Solanum pennellii HOM05D004585 ORTHO05D005640 7.7e-118 427.2 218 98.2
Solyc06g074720.4 Solanum lycopersicum HOM05D004585 ORTHO05D005640 3.8e-109 398.3 202 98.5
PGSC0003DMG400000462 Solanum tuberosum HOM05D004585 ORTHO05D005640 2.6e-105 385.6 214 87.9
Sopen11g026360 Solanum pennellii HOM05D004585 ORTHO05D005640 7.5e-105 384.0 214 87.9
Peaxi162Scf00150g00411 Petunia axillaris HOM05D004585 ORTHO05D005640 4.1e-103 378.3 214 86.0
Nitab4.5_0000442g0080 Nicotiana tabacum HOM05D004585 ORTHO05D005640 3.5e-102 375.2 213 86.9
Nitab4.5_0003470g0110 Nicotiana tabacum HOM05D004585 ORTHO05D005640 1.2e-99 366.7 202 90.1
Cc02_g10240 Coffea canephora HOM05D004585 ORTHO05D005640 2.4e-95 352.4 220 79.5
Actinidia18578 Actinidia chinensis HOM05D004585 ORTHO05D005640 3.9e-93 345.1 218 78.0
Dinv20840 Davidia involucrata HOM05D004585 ORTHO05D005640 1.5e-92 343.2 213 80.3
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 3.3e-92 342.0 218 78.4
Actinidia06707 Actinidia chinensis HOM05D004585 ORTHO05D005640 5.2e-90 334.7 218 76.1
Rhsim03G0106100 Rhododendron simsii HOM05D004585 ORTHO05D005640 1.2e-89 333.6 218 74.3
Oeu027977.1 Olea europaea HOM05D004585 ORTHO05D005640 1.5e-89 333.2 218 75.7
SGA_v2.0_scaffold113G31721 Striga asiatica HOM05D004585 ORTHO05D005640 2.0e-89 332.8 218 74.3
vmacro21510 Vaccinium macrocarpon HOM05D004585 ORTHO05D005640 3.4e-89 332.0 218 76.1
CSS0035600 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 5.8e-89 331.3 218 75.2
MSTRG.412 Avicennia marina HOM05D004585 ORTHO05D005640 6.4e-88 327.8 215 73.5
Lsat_1_v5_gn_2_86220 Lactuca sativa HOM05D004585 ORTHO05D005640 8.3e-88 327.4 215 74.4
SGA_v2.0_scaffold10G05319 Striga asiatica HOM05D004585 ORTHO05D005640 1.1e-87 327.0 218 75.7
HanXRQChr14g0456901 Helianthus annuus HOM05D004585 ORTHO05D005640 5.4e-87 324.7 204 76.0
Hma1.2p1_0026F.1_g016750 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 9.2e-87 323.9 218 76.1
ECA238G4124 Erigeron canadensis HOM05D004585 ORTHO05D005640 2.1e-86 322.8 215 73.5
PGR142G4346 Punica granatum HOM05D004585 ORTHO05D005640 7.8e-86 320.9 215 73.5
TAR633G2635 Trochodendron aralioides HOM05D004585 ORTHO05D005640 6.6e-85 317.8 217 73.3
HanXRQChr10g0319081 Helianthus annuus HOM05D004585 ORTHO05D005640 1.9e-84 316.2 205 74.1
GSVIVG01021851001 Vitis vinifera HOM05D004585 ORTHO05D005640 3.3e-84 315.5 218 74.3
TAR633G1318 Trochodendron aralioides HOM05D004585 ORTHO05D005640 4.3e-84 315.1 219 72.6
SGA_v2.0_scaffold154G37190 Striga asiatica HOM05D004585 ORTHO05D005640 5.6e-84 314.7 217 71.9
Lj3A931T47 Lonicera japonica HOM05D004585 ORTHO05D005640 7.3e-84 314.3 201 79.1
Thecc.10G109700 Theobroma cacao HOM05D004585 ORTHO05D005640 7.3e-84 314.3 218 72.9
Thecc.K0008500 Theobroma cacao HOM05D004585 ORTHO05D005640 7.3e-84 314.3 218 72.9
Cfa011225 Carpinus fangiana HOM05D004585 ORTHO05D005640 6.2e-83 311.2 218 72.5
Eucgr.G02711 Eucalyptus grandis HOM05D004585 ORTHO05D005640 8.1e-83 310.8 219 71.7
Nn3g20167 Nelumbo nucifera HOM05D004585 ORTHO05D005640 3.1e-82 308.9 220 70.5
Cfa013557 Carpinus fangiana HOM05D004585 ORTHO05D005640 5.2e-82 308.1 218 72.5
Haze_02611 Corylus avellana HOM05D004585 ORTHO05D005640 6.8e-82 307.8 218 72.0
Phvul.005G089300 Phaseolus vulgaris HOM05D004585 ORTHO05D005640 1.5e-81 306.6 215 70.7
Gorai.013G013300 Gossypium raimondii HOM05D004585 ORTHO05D005640 4.4e-81 305.1 218 71.1
SalBow6G2458 Salvia bowleyana HOM05D004585 ORTHO05D005640 5.8e-81 304.7 248 64.1
THA.LOC104816458 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 9.9e-81 303.9 218 71.6
Prupe.1G580700 Prunus persica HOM05D004585 ORTHO05D005640 1.3e-80 303.5 219 72.6
Dinv30656 Davidia involucrata HOM05D004585 ORTHO05D005640 1.7e-80 303.1 218 72.0
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea HOM05D004585 ORTHO05D005640 2.2e-80 302.8 216 71.3
CiPaw.01G204400 Carya illinoinensis HOM05D004585 ORTHO05D005640 3.8e-80 302.0 218 71.6
Gohir.D13G012100 Gossypium hirsutum HOM05D004585 ORTHO05D005640 3.8e-80 302.0 218 70.6
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea HOM05D004585 ORTHO05D005640 4.9e-80 301.6 216 71.3
Duzib128G1105 Durio zibethinus HOM05D004585 ORTHO05D005640 4.9e-80 301.6 223 70.0
Migut.F01706 Erythranthe guttata HOM05D004585 ORTHO05D005640 6.4e-80 301.2 220 69.1
Lalb_Chr14g0365991 Lupinus albus HOM05D004585 ORTHO05D005640 1.1e-79 300.4 216 71.3
Atru.chr12.969 Acer truncatum HOM05D004585 ORTHO05D005640 1.4e-79 300.1 218 70.2
ClCG08G008100 Citrullus lanatus HOM05D004585 ORTHO05D005640 1.9e-79 299.7 218 67.9
TWI38G0710 Tripterygium wilfordii HOM05D004585 ORTHO05D005640 2.4e-79 299.3 218 68.8
Manes.05G202500 Manihot esculenta HOM05D004585 ORTHO05D005640 3.2e-79 298.9 219 68.9
Glyma.09G111400 Glycine max HOM05D004585 ORTHO05D005640 4.1e-79 298.5 219 69.9
Gohir.A13G011400 Gossypium hirsutum HOM05D004585 ORTHO05D005640 4.1e-79 298.5 218 69.3
Sed0016970 Sechium edule HOM05D004585 ORTHO05D005640 7.1e-79 297.7 218 68.8
MELO3C019883.2 Cucumis melo HOM05D004585 ORTHO05D005640 1.6e-78 296.6 218 67.4
Sed0007729 Sechium edule HOM05D004585 ORTHO05D005640 1.6e-78 296.6 218 67.0
CANSAT56G4487 Cannabis sativa HOM05D004585 ORTHO05D005640 2.1e-78 296.2 215 69.3
Glyma.02G173000 Glycine max HOM05D004585 ORTHO05D005640 2.7e-78 295.8 208 70.2
Medtr1g108290 Medicago truncatula HOM05D004585 ORTHO05D005640 4.6e-78 295.0 215 67.9
PSO675G5749 Papaver somniferum HOM05D004585 ORTHO05D005640 4.6e-78 295.0 226 66.8
PSO717G0039 Papaver somniferum HOM05D004585 ORTHO05D005640 6.0e-78 294.7 228 66.2
TPR.G4853 Trifolium pratense HOM05D004585 ORTHO05D005640 6.0e-78 294.7 215 68.8
VMungo1080G1669 Vigna mungo HOM05D004585 ORTHO05D005640 7.8e-78 294.3 215 67.4
CsaV3_6G004080 Cucumis sativus L. HOM05D004585 ORTHO05D005640 1.3e-77 293.5 218 66.5
Ca_04982_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 1.7e-77 293.1 215 67.4
Ca_11096_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 1.7e-77 293.1 215 67.4
Lj6g0005217 Lotus japonicus HOM05D004585 ORTHO05D005640 2.3e-77 292.7 215 67.0
Lalb_Chr22g0354511 Lupinus albus HOM05D004585 ORTHO05D005640 3.0e-77 292.4 216 69.0
THA.LOC104823192 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 3.0e-77 292.4 223 68.6
Psat6g221600 Pisum sativum HOM05D004585 ORTHO05D005640 3.9e-77 292.0 215 67.9
Sc09g0005570 Simmondsia chinensis HOM05D004585 ORTHO05D005640 3.9e-77 292.0 205 69.3
PSO173G0033 Papaver somniferum HOM05D004585 ORTHO05D005640 1.1e-76 290.4 228 65.4
Aa31LG3G3420 Aethionema arabicum HOM05D004585 ORTHO05D005640 1.2e-75 287.0 221 64.7
Potri.010G234800 Populus trichocarpa HOM05D004585 ORTHO05D005640 1.2e-75 287.0 219 65.8
Thhalv10014607m.g Eutrema salsugineum HOM05D004585 ORTHO05D005640 4.7e-75 285.0 227 62.1
Sp6g38180 Schrenkiella parvula HOM05D004585 ORTHO05D005640 4.7e-75 285.0 224 61.6
QL04p041242 Quercus lobata HOM05D004585 ORTHO05D005640 6.2e-75 284.6 216 68.5
Ciclev10013752m.g Citrus clementina HOM05D004585 ORTHO05D005640 1.8e-74 283.1 215 68.4
Ah.16g102420 Amaranthus hybridus HOM05D004585 ORTHO05D005640 4.0e-74 282.0 185 74.1
BcaC06g32168 Brassica carinata HOM05D004585 ORTHO05D005640 4.0e-74 282.0 225 61.3
A10p31500 Brassica napus HOM05D004585 ORTHO05D005640 5.2e-74 281.6 225 61.3
BraA10t45196Z Brassica rapa HOM05D004585 ORTHO05D005640 5.2e-74 281.6 225 61.3
CARHR208690 Cardamine hirsuta HOM05D004585 ORTHO05D005640 5.2e-74 281.6 224 61.2
C09p72190 Brassica napus HOM05D004585 ORTHO05D005640 6.9e-74 281.2 225 61.3
BolC9t59963H Brassica oleracea HOM05D004585 ORTHO05D005640 6.9e-74 281.2 225 61.3
Cpa.g.sc128.48 Carica papaya HOM05D004585 ORTHO05D005640 8.9e-74 280.8 201 70.6
Hund06922 Selenicereus undatus HOM05D004585 ORTHO05D005640 8.9e-74 280.8 207 67.6
Ah.03g136890 Amaranthus hybridus HOM05D004585 ORTHO05D005640 1.2e-73 280.4 184 72.8
C02p02000 Brassica napus HOM05D004585 ORTHO05D005640 2.0e-73 279.6 225 60.9
BraA02t04819Z Brassica rapa HOM05D004585 ORTHO05D005640 2.6e-73 279.3 221 61.5
MD08G1243300 Malus domestica HOM05D004585 ORTHO05D005640 2.6e-73 279.3 212 66.0
BcaC03g12939 Brassica carinata HOM05D004585 ORTHO05D005640 4.4e-73 278.5 225 60.4
Hund13887 Selenicereus undatus HOM05D004585 ORTHO05D005640 9.9e-73 277.3 209 64.6
RcHm_v2.0_Chr4g0433501 Rosa chinensis HOM05D004585 ORTHO05D005640 1.3e-72 276.9 213 68.1
Sabra10G0182000 Salix brachista HOM05D004585 ORTHO05D005640 2.9e-72 275.8 219 63.5
Carub.0006s0352 Capsella rubella HOM05D004585 ORTHO05D005640 1.1e-71 273.9 226 61.1
CSS0012030 Camellia sinensis var. sinensis HOM05D004585 ORTHO05D005640 4.2e-71 271.9 222 64.9
EL10Ac2g03709 Beta vulgaris HOM05D004585 ORTHO05D005640 5.4e-71 271.6 182 70.3
Atru.chr10.1244 Acer truncatum HOM05D004585 ORTHO05D005640 7.1e-71 271.2 184 73.4
COL.COLO4_33895 Corchorus olitorius HOM05D004585 ORTHO05D005640 1.2e-70 270.4 170 75.9
PSO210G0756 Papaver somniferum HOM05D004585 ORTHO05D005640 1.2e-70 270.4 195 69.2
FvH4_5g27351 Fragaria vesca HOM05D004585 ORTHO05D005640 3.5e-70 268.9 222 64.9
AL6G14230 Arabidopsis lyrata HOM05D004585 ORTHO05D005640 4.6e-70 268.5 223 60.1
AUR62003699 Chenopodium quinoa HOM05D004585 ORTHO05D005640 1.7e-69 266.5 202 65.3
CDE04G0123 Ceratophyllum demersum HOM05D004585 ORTHO05D005640 2.3e-69 266.2 216 62.5
FAN26G1691 Fragaria x ananassa HOM05D004585 ORTHO05D005640 5.1e-69 265.0 222 64.0
CDE02G2408 Ceratophyllum demersum HOM05D000251 ORTHO05D002506 1.9e-68 263.1 218 62.8
AT5G04600 Arabidopsis thaliana HOM05D004585 ORTHO05D005640 4.3e-68 261.9 222 58.6
ATR0068G115 Amborella trichopoda HOM05D004585 ORTHO05D005640 2.1e-67 259.6 210 59.0
EL10Ac4g08678 Beta vulgaris HOM05D004585 ORTHO05D005640 6.2e-67 258.1 170 71.2
Haze_22178 Corylus avellana HOM05D004585 ORTHO05D005640 8.1e-67 257.7 219 66.2
Os08g0412200 Oryza sativa ssp. japonica HOM05D004585 ORTHO05D005640 3.1e-66 255.8 218 56.4
EL10Ac4g08675 Beta vulgaris HOM05D004585 ORTHO05D005640 5.3e-66 255.0 173 69.9
FAN13G1680 Fragaria x ananassa HOM05D005925 ORTHO05D007270 4.5e-65 251.9 255 56.5
FAN18G1621 Fragaria x ananassa HOM05D005925 ORTHO05D007270 4.5e-65 251.9 255 56.5
HPP92_008213 Vanilla planifolia HOM05D004585 ORTHO05D005640 7.6e-65 251.1 214 58.9
COL.COLO4_27310 Corchorus olitorius HOM05D004585 ORTHO05D005640 1.6e-59 233.4 146 77.4
Medtr4g127330 Medicago truncatula HOM05D004585 ORTHO05D005640 1.6e-59 233.4 184 64.7
DCAR_012470 Daucus carota HOM05D004585 ORTHO05D005640 1.4e-58 230.3 143 76.9
Zm00001eb178930 Zea mays HOM05D004585 ORTHO05D005640 5.8e-57 224.9 195 59.5
Ciclev10033004m.g Citrus clementina HOM05D004585 ORTHO05D005640 3.8e-56 222.2 144 72.9
Oeu046197.1 Olea europaea HOM05D004585 ORTHO05D005640 6.2e-51 204.9 142 69.0
Lj9A82T44 Lonicera japonica HOM05D004585 ORTHO05D005640 5.8e-49 198.4 152 71.1
Pp3c8_3240 Physcomitrium patens HOM05D004585 ORTHO05D005640 7.6e-49 198.0 162 54.3
BolC2t06157H Brassica oleracea HOM05D004585 ORTHO05D005640 3.8e-48 195.7 159 59.1
DCAR_001331 Daucus carota HOM05D004585 ORTHO05D005640 1.9e-47 193.4 143 67.8
TPR.G31410 Trifolium pratense HOM05D004585 ORTHO05D005640 1.2e-46 190.7 139 68.3
Mapoly0059s0023 Marchantia polymorpha HOM05D004585 ORTHO05D005640 3.5e-46 189.1 184 50.5
Pp3c3_32540 Physcomitrium patens HOM05D004585 ORTHO05D005640 4.6e-46 188.7 213 45.1
AUR62018007 Chenopodium quinoa HOM05D004585 ORTHO05D005640 1.4e-42 177.2 124 69.4
AagrBONN_evm.TU.Sc2ySwM_228.827 Anthoceros agrestis HOM05D004585 ORTHO05D005640 2.2e-40 169.9 142 56.3
SMO117G0347 Selaginella moellendorffii HOM05D004585 ORTHO05D005640 3.2e-39 166.0 194 42.8
MCO05G308 Micromonas commoda HOM05D004585 ORTHO05D005640 5.5e-39 165.2 149 48.3
Lj6g0027575 Lotus japonicus HOM05D004585 ORTHO05D005640 1.2e-38 164.1 123 67.5
Aqoxy1G00240 Aquilegia oxysepala HOM05D004585 ORTHO05D005640 3.3e-36 156.0 107 69.2
Cre08.g368500 Chlamydomonas reinhardtii HOM05D004585 ORTHO05D005640 2.2e-35 153.3 178 43.3
unitig_26.g9455 Utricularia gibba HOM05D004585 ORTHO05D005640 4.8e-35 152.1 215 45.1
PRCOL_00003387 Prasinoderma coloniale HOM05D004585 ORTHO05D005640 1.1e-34 151.0 155 43.9
CBR_g11154 Chara braunii HOM05D004585 ORTHO05D005640 1.5e-33 147.1 215 38.6
Cfa021710 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.9e-31 140.2 177 39.5
Oeu060262.1 Olea europaea HOM05D004585 ORTHO05D005640 8.8e-29 131.3 92 71.7
BcaC06g32170 Brassica carinata HOM05D004585 ORTHO05D005640 2.1e-22 110.2 77 62.3
TPR.G32073 Trifolium pratense HOM05D004585 ORTHO05D005640 2.1e-22 110.2 74 64.9
Haze_26093 Corylus avellana HOM05D004585 ORTHO05D005640 9.7e-20 101.3 159 35.2
MD15G1436900 Malus domestica HOM05D004585 ORTHO05D005640 1.7e-16 90.5 75 58.7
Oeu053518.1 Olea europaea HOM05D004585 ORTHO05D005640 2.2e-16 90.1 49 83.7
COL.COLO4_14104 Corchorus olitorius HOM05D004585 ORTHO05D005736 2.7e-14 83.2 64 64.1
EL10Ac7g17659 Beta vulgaris HOM05D004585 ORTHO05D005640 2.3e-13 80.1 70 52.9
BcaB01g05909 Brassica carinata HOM05D004585 ORTHO05D005640 2.3e-13 80.1 58 58.6
COL.COLO4_17533 Corchorus olitorius HOM05D001240 ORTHO05D002450 5.2e-13 79.0 48 75.0
MD15G1437000 Malus domestica HOM05D004585 ORTHO05D005640 5.2e-13 79.0 49 75.5
MD15G1437100 Malus domestica HOM05D004585 ORTHO05D005640 2.6e-12 76.6 76 55.3
SalBow3G2087 Salvia bowleyana HOM05D004585 ORTHO05D005640 1.3e-11 74.3 43 76.7
Glyma.09G232800 Glycine max HOM05D004585 ORTHO05D005640 1.2e-09 67.8 63 52.4
CAN.G530.9 Capsicum annuum HOM05D000115 ORTHO05D000645 1.0e-08 64.7 38 78.9
DCAR_009360 Daucus carota HOM05D003145 ORTHO05D003586 1.5e-07 60.8 81 34.6
EL10Ac2g02998 Beta vulgaris HOM05D000461 ORTHO05D005640 3.2e-07 59.7 55 56.4
Gohir.A12G080400 Gossypium hirsutum HOM05D000285 ORTHO05D000241 7.2e-07 58.5 99 32.3
Prupe.6G216700 Prunus persica HOM05D000285 ORTHO05D000241 9.4e-07 58.2 108 33.3
EL10Ac4g07530 Beta vulgaris HOM05D000285 ORTHO05D000241 1.2e-06 57.8 98 35.7
vmacro02513 Vaccinium macrocarpon HOM05D001495 ORTHO05D001391 1.2e-06 57.8 76 38.2
Aa31LG9G1110 Aethionema arabicum HOM05D000285 ORTHO05D000241 3.6e-06 56.2 96 31.2
PSO063G7338 Papaver somniferum HOM05D004585 ORTHO05D302184 3.6e-06 56.2 127 33.9
Prupe.7G108900 Prunus persica HOM05D001873 ORTHO05D001976 3.6e-06 56.2 106 28.3
unitig_61.g26147 Utricularia gibba HOM05D001495 ORTHO05D001391 3.6e-06 56.2 74 37.8
Lj1P996T49 Lonicera japonica HOM05D003145 ORTHO05D003586 6.1e-06 55.5 97 32.0


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