Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.3e-82 309.7 158 100.0
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 2.4e-76 288.9 158 93.7
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 3.1e-76 288.5 158 93.7
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 2.2e-69 265.8 159 86.2
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 2.8e-69 265.4 159 85.5
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 4.8e-69 264.6 159 86.8
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 1.4e-60 236.5 159 79.9
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.3e-29 133.7 160 44.4
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 4.9e-29 131.7 151 48.3
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 6.4e-29 131.3 155 49.0
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.7e-26 123.2 151 45.0
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 6.6e-26 121.3 149 44.3
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 1.5e-25 120.2 149 45.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 1.5e-25 120.2 149 47.0
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 9.5e-25 117.5 160 45.6
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 9.5e-25 117.5 157 45.2
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 6.2e-24 114.8 161 43.5
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 1.0e-23 114.0 162 43.2
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 1.4e-23 113.6 158 42.4
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 1.4e-23 113.6 153 43.1
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.3e-23 112.8 152 43.4
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 5.2e-23 111.7 159 41.5
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 5.2e-23 111.7 155 41.9
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 8.9e-23 110.9 155 41.9
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 1.2e-22 110.5 153 41.8
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 1.5e-22 110.2 155 44.5
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 2.6e-22 109.4 160 41.9
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 2.6e-22 109.4 160 41.9
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 3.4e-22 109.0 150 43.3
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 5.8e-22 108.2 155 41.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 5.8e-22 108.2 154 42.2
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 7.5e-22 107.8 149 43.6
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 7.5e-22 107.8 160 40.0
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 9.8e-22 107.5 163 45.4
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 1.3e-21 107.1 157 41.4
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 2.2e-21 106.3 157 43.3
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 2.2e-21 106.3 155 45.8
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 6.4e-21 104.8 152 43.4
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 1.4e-20 103.6 161 41.6
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 1.4e-20 103.6 160 40.0
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 4.1e-20 102.1 161 41.6
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 5.4e-20 101.7 153 41.8
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 5.4e-20 101.7 157 40.1
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.2e-19 100.5 149 43.0
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.0e-19 99.8 156 39.1
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.7e-19 99.4 150 40.7
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 2.7e-19 99.4 160 39.4
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 7.8e-19 97.8 155 39.4
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 1.3e-18 97.1 152 46.7
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 6.6e-18 94.7 154 39.0
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 8.6e-18 94.4 149 42.3
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 1.1e-17 94.0 159 40.3
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 2.5e-17 92.8 149 39.6
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 3.3e-17 92.4 148 41.2
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 3.3e-17 92.4 149 41.6
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 3.3e-17 92.4 149 41.6
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 3.3e-17 92.4 149 41.6
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 7.3e-17 91.3 154 39.0
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 1.2e-16 90.5 154 39.0
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 4.7e-16 88.6 152 39.5
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 4.7e-16 88.6 161 37.9
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 4.7e-16 88.6 156 39.1
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 1.4e-15 87.0 155 36.1
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 4.0e-15 85.5 151 38.4
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 5.2e-15 85.1 156 37.2
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 8.9e-15 84.3 154 37.7
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 1.5e-14 83.6 88 46.6
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.4e-14 82.0 104 47.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 2.2e-13 79.7 143 37.1
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 2.9e-13 79.3 147 36.7
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 4.9e-13 78.6 154 35.1
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 6.4e-13 78.2 156 37.2
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 6.4e-13 78.2 78 48.7
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 8.3e-13 77.8 143 35.7
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 1.9e-12 76.6 153 32.7
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 2.4e-12 76.3 148 35.8
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.9e-09 66.6 113 41.6
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 7.6e-06 54.7 64 45.3


User provided reference genes

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