Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006032 Solanum tuberosum HOM05D003562 ORTHO05D004074 1.6e-91 339.3 163 100.0
Nitab4.5_0004377g0020 Nicotiana tabacum HOM05D003562 ORTHO05D004074 1.8e-71 272.7 163 78.5
Nitab4.5_0002396g0040 Nicotiana tabacum HOM05D003562 ORTHO05D004074 9.1e-63 243.8 150 74.7
Peaxi162Scf00025g02824 Petunia axillaris HOM05D003562 ORTHO05D004074 1.2e-59 233.4 158 69.6
Nitab4.5_0004377g0030 Nicotiana tabacum HOM05D003562 ORTHO05D004074 8.8e-58 227.3 157 67.5
Peaxi162Scf00125g00231 Petunia axillaris HOM05D003562 ORTHO05D004074 3.7e-56 221.9 149 70.5
PGSC0003DMG400039163 Solanum tuberosum HOM05D003562 ORTHO05D004074 8.2e-56 220.7 155 67.1
Nitab4.5_0002396g0020 Nicotiana tabacum HOM05D003562 ORTHO05D004074 1.7e-53 213.0 163 66.3
PGSC0003DMG400042505 Solanum tuberosum HOM05D003562 ORTHO05D004074 2.9e-53 212.2 163 62.0
CAN.G557.9 Capsicum annuum HOM05D003562 ORTHO05D004074 5.0e-53 211.5 158 64.6
PGSC0003DMG400006063 Solanum tuberosum HOM05D003562 ORTHO05D004074 6.5e-53 211.1 164 63.4
PGSC0003DMG400006062 Solanum tuberosum HOM05D003562 ORTHO05D004074 9.4e-52 207.2 163 61.3
Solyc11g005240.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 4.7e-51 204.9 157 63.1
Sopen11g001250 Solanum pennellii HOM05D003562 ORTHO05D004074 1.0e-50 203.8 157 63.1
CAN.G557.10 Capsicum annuum HOM05D003562 ORTHO05D004074 5.2e-50 201.4 162 59.9
Solyc11g005230.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 6.7e-50 201.1 159 60.4
Sopen11g001240 Solanum pennellii HOM05D003562 ORTHO05D004074 6.7e-50 201.1 159 60.4
Nitab4.5_0002396g0050 Nicotiana tabacum HOM05D003562 ORTHO05D004074 2.9e-37 159.1 116 64.7
CAN.G341.6 Capsicum annuum HOM05D003562 ORTHO05D002248 1.8e-34 149.8 160 53.1
Solyc06g005930.3 Solanum lycopersicum HOM05D003562 ORTHO05D004074 1.7e-32 143.3 142 52.8
Sopen11g001180 Solanum pennellii HOM05D003562 ORTHO05D004074 2.7e-30 136.0 154 44.8
Solyc11g005180.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 6.6e-29 131.3 154 43.5
Rhsim08G0039700 Rhododendron simsii HOM05D000884 ORTHO05D002127 1.3e-24 117.1 147 45.6
vmacro18374 Vaccinium macrocarpon HOM05D000884 ORTHO05D002127 6.3e-24 114.8 150 42.7
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 2.3e-21 106.3 145 42.1
MBI18_g45417_MAGBIO Magnolia biondii HOM05D003562 ORTHO05D004074 1.5e-17 93.6 143 35.7
QL06p011807 Quercus lobata HOM05D003562 ORTHO05D004074 5.8e-17 91.7 151 35.8
PGSC0003DMG400016924 Solanum tuberosum HOM05D003562 ORTHO05D051166 7.5e-17 91.3 71 62.0
Solyc03g071623.1 Solanum lycopersicum HOM05D003562 ORTHO05D051166 1.9e-15 86.7 62 67.7
MBI18_g13610_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-12 76.6 132 34.1
Dinv02658 Davidia involucrata HOM05D003562 ORTHO05D004074 2.3e-10 69.7 88 44.3
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 4.0e-10 68.9 143 32.9
MBI15_g26816_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-10 68.6 129 28.7
MBI11_g29029_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.4e-09 65.5 129 31.8
MBI07_g41529_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.5e-09 64.7 128 27.3
MBI17_g12074_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.2e-08 63.2 149 27.5
MBI06_g08197_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-08 62.0 125 27.2
MBI07_g23924_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-08 62.0 133 26.3
MBI14_g13525_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-08 62.0 128 29.7
MBI17_g43446_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.4e-08 61.6 128 28.1
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 6.4e-08 61.6 134 26.9
MBI18_g16547_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.3e-08 61.2 128 30.5
MBI06_g05819_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-07 60.8 130 31.5
MBI14_g01722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 60.1 129 25.6
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 1.9e-07 60.1 134 29.9
MBI14_g30670_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-07 59.7 117 32.5
MBI18_g23712_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-07 59.7 139 28.1
Lj2P493T14 Lonicera japonica HOM05D000155 ORTHO05D000022 3.2e-07 59.3 130 27.7
MBI06_g39080_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.4e-07 58.5 141 33.3
MBI15_g39379_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.4e-07 58.5 123 30.1
PGSC0003DMG400006031 Solanum tuberosum HOM05D003562 ORTHO05D395926 7.1e-07 58.2 78 38.5
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 9.2e-07 57.8 164 26.8
MBI10_g30427_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.4 136 28.7
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.4 132 29.5
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 1.2e-06 57.4 140 22.9
MBI03_g05800_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.0 125 28.8
MBI19_g10810_MAGBIO Magnolia biondii HOM05D001269 ORTHO05D001083 1.6e-06 57.0 156 26.3
Dinv33286 Davidia involucrata HOM05D003562 ORTHO05D004074 2.1e-06 56.6 107 32.7
MBI09_g40762_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.2 90 40.0
MBI18_g33395_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-06 55.5 148 25.7
MBI05_g34248_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-06 55.1 123 32.5
PSO566G0030 Papaver somniferum HOM05D000155 ORTHO05D000022 6.0e-06 55.1 133 31.6


User provided reference genes

Program Settings