Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 2.7e-114 415.2 197 100.0
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 1.8e-110 402.5 197 96.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 1.8e-110 402.5 197 96.4
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.4e-102 374.4 195 88.2
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.2e-101 373.2 195 87.2
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.6e-101 372.9 195 87.2
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.5e-99 365.5 187 89.3
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 6.4e-87 324.3 187 77.5
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.7e-84 316.2 191 72.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.3e-84 315.8 186 78.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 5.1e-84 314.7 191 73.8
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 5.6e-83 311.2 187 75.4
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 8.1e-82 307.4 183 77.0
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.4e-81 306.6 195 73.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.8e-81 306.2 186 73.7
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.3e-81 305.8 186 76.3
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.1e-81 305.4 187 75.9
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 4.0e-81 305.1 187 73.3
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 5.2e-81 304.7 187 72.7
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.9e-81 303.9 187 73.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-80 303.5 187 72.7
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.5e-80 303.1 190 73.2
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.5e-80 303.1 187 74.9
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.5e-80 303.1 185 76.2
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 3.4e-80 302.0 187 74.9
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 3.4e-80 302.0 187 72.7
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.5e-80 300.8 187 73.3
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.5e-80 300.8 187 73.3
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 9.9e-80 300.4 189 73.5
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.3e-79 300.1 188 72.3
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.2e-79 299.3 192 72.9
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 2.2e-79 299.3 187 73.3
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.9e-79 298.9 188 71.8
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 4.9e-79 298.1 187 72.7
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 4.9e-79 298.1 189 70.4
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.4e-78 296.6 187 71.7
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.9e-78 296.2 188 70.2
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 4.1e-78 295.0 187 73.3
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.6e-77 293.1 187 71.1
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.1e-77 292.7 187 71.7
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 2.1e-77 292.7 183 71.0
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 2.7e-77 292.4 187 71.1
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 3.5e-77 292.0 187 71.7
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 6.0e-77 291.2 187 72.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 6.0e-77 291.2 187 71.1
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 7.8e-77 290.8 187 72.2
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.0e-76 290.4 188 70.2
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.7e-76 289.7 202 68.8
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 8.6e-76 287.3 188 68.6
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 8.6e-76 287.3 188 68.6
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 3.3e-75 285.4 186 69.9
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.2e-74 283.5 226 59.3
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.8e-74 282.3 187 69.5
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 6.2e-74 281.2 184 69.0
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.2e-74 281.2 184 69.0
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 6.2e-74 281.2 185 69.7
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 8.1e-74 280.8 187 70.1
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.4e-73 280.0 187 71.7
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.8e-73 279.6 187 67.9
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.4e-73 279.3 188 67.0
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 4.0e-73 278.5 187 67.4
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 4.0e-73 278.5 187 69.0
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 5.2e-73 278.1 188 69.7
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 6.8e-73 277.7 183 71.6
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 6.8e-73 277.7 187 69.5
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 8.9e-73 277.3 185 68.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.5e-72 276.6 186 68.3
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.5e-72 276.6 186 68.3
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.5e-72 276.6 186 68.3
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 3.4e-72 275.4 186 67.2
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.8e-72 274.6 187 66.8
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.7e-71 273.1 183 69.4
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.8e-71 271.9 187 67.9
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 3.8e-71 271.9 186 65.6
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 6.4e-71 271.2 186 66.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 8.4e-71 270.8 188 68.6
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.1e-70 270.4 186 65.1
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.1e-70 270.4 186 65.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.9e-70 269.6 190 65.8
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.9e-70 269.6 188 67.6
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 2.4e-70 269.2 186 64.5
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 3.2e-70 268.9 186 64.5
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 5.4e-70 268.1 217 61.8
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 2.7e-69 265.8 189 64.6
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.5e-69 265.4 186 66.1
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.6e-69 265.0 187 64.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 4.6e-69 265.0 189 65.1
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 5.1e-68 261.5 188 64.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.5e-67 259.2 187 64.2
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 3.3e-67 258.8 190 64.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 4.3e-67 258.5 186 64.5
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.6e-67 258.1 192 63.0
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.3e-66 256.9 192 63.5
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.8e-66 255.8 182 65.9
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.1e-65 253.8 189 64.6
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.5e-64 250.0 185 62.7
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 4.4e-64 248.4 194 60.8
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 5.8e-64 248.1 185 62.7
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.7e-63 246.5 186 62.9
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 4.9e-63 245.0 192 61.5
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.4e-62 242.7 187 62.6
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.8e-61 237.7 148 72.3
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.7e-60 236.5 148 71.6
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 5.1e-60 235.0 187 61.0
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 2.5e-59 232.6 175 64.6
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 9.6e-59 230.7 189 59.8
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 2.1e-58 229.6 189 58.7
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.8e-58 229.2 189 60.3
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.5e-56 223.4 179 62.0
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.5e-56 221.9 187 58.3
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 4.9e-55 218.4 187 55.6
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.4e-54 216.9 190 55.3
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 3.2e-54 215.7 175 58.3
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 7.1e-54 214.5 198 56.6
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.8e-52 209.9 189 57.1
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.8e-52 209.9 172 59.3
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.9e-51 206.5 183 54.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 2.4e-49 199.5 185 51.4
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-48 197.2 135 65.2
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 6.9e-41 171.4 110 68.2
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.7e-31 140.2 85 71.8
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.9e-30 136.7 110 60.0
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 4.6e-29 132.1 79 77.2
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.7e-26 123.6 98 61.2
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 7.4e-19 98.2 120 47.5
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.0e-16 90.1 94 47.9
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.4e-09 67.4 76 44.7


User provided reference genes

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