Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 9.9e-177 624.4 446 100.0
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 3.1e-170 602.8 450 97.6
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 1.2e-169 600.9 448 98.0
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 6.7e-157 558.5 451 91.6
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 5.6e-156 555.4 458 90.2
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 1.6e-150 537.3 448 90.4
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 5.3e-146 522.3 449 88.2
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 4.4e-124 449.5 430 82.8
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 2.9e-120 436.8 440 79.3
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.0e-116 424.1 415 82.9
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.0e-113 414.1 448 76.1
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.0e-113 414.1 448 76.1
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.5e-112 409.1 420 80.7
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 1.1e-111 408.3 432 76.6
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.9e-111 407.5 420 80.2
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 7.2e-111 405.6 433 77.1
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 3.0e-109 400.2 444 76.8
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 4.1e-106 389.8 432 73.8
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.0e-104 385.2 419 78.0
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 3.8e-104 383.3 433 75.1
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 5.5e-103 379.4 438 74.7
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 2.8e-102 377.1 435 74.3
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 2.3e-101 374.0 435 73.8
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 2.6e-100 370.5 433 74.4
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 5.9e-97 359.4 445 70.3
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 8.6e-96 355.5 440 70.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 7.3e-95 352.4 435 70.8
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.2e-94 351.7 435 70.6
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 1.6e-94 351.3 440 70.0
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 4.7e-94 349.7 434 70.0
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 1.8e-93 347.8 445 71.5
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.3e-93 347.4 465 67.7
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.2e-92 345.1 465 67.3
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.2e-92 345.1 457 68.1
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 1.5e-92 344.7 445 70.1
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 1.5e-92 344.7 457 68.9
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 3.4e-92 343.6 439 70.2
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 5.8e-92 342.8 434 68.9
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 7.5e-92 342.4 450 70.0
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 1.7e-91 341.3 433 70.9
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 2.9e-91 340.5 445 67.4
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.1e-90 338.6 434 68.9
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.6e-89 334.7 439 67.4
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 3.5e-89 333.6 432 69.4
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 4.6e-89 333.2 443 68.4
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.6e-89 333.2 439 71.1
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.0e-88 332.0 440 68.6
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 3.9e-88 330.1 407 73.5
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 3.9e-88 330.1 461 67.2
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 6.6e-88 329.3 439 70.4
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.9e-87 327.8 454 66.7
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 7.3e-87 325.9 434 69.1
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 9.5e-87 325.5 446 67.0
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.8e-86 323.9 426 71.1
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.6e-86 323.6 432 67.1
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 1.8e-85 321.2 439 67.2
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 8.9e-85 318.9 439 67.7
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 1.2e-84 318.5 408 62.0
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 5.8e-84 316.2 446 67.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 5.8e-84 316.2 407 72.0
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 7.5e-84 315.8 433 67.9
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 2.9e-83 313.9 442 67.4
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 3.7e-83 313.5 460 66.7
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 8.3e-83 312.4 441 68.3
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 8.3e-83 312.4 406 72.2
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.4e-82 311.6 433 67.7
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 4.1e-82 310.1 433 67.9
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 1.2e-81 308.5 433 67.0
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 6.0e-81 306.2 405 71.6
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.0e-80 305.4 433 66.7
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.0e-80 305.4 433 66.7
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 3.0e-80 303.9 409 68.9
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.5e-79 301.6 529 48.4
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.9e-79 301.2 422 68.7
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 7.3e-79 299.3 438 65.5
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 2.1e-78 297.7 226 67.3
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 2.1e-78 297.7 430 64.4
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 3.6e-78 297.0 440 65.2
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 5.2e-77 293.1 440 65.0
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 9.9e-76 288.9 408 68.4
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 4.9e-75 286.6 399 67.9
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 2.7e-73 280.8 437 64.1
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 1.3e-72 278.5 437 65.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 5.1e-72 276.6 415 46.3
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 6.6e-72 276.2 437 64.1
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 5.8e-68 263.1 435 63.7
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.4e-66 258.5 439 46.9
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 4.0e-61 240.4 226 55.8
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.4e-59 233.0 223 54.7
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.3e-51 208.8 374 66.6
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 5.8e-44 183.3 406 59.4
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 7.6e-44 183.0 133 66.2
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 4.6e-41 173.7 275 80.7
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.2e-36 159.1 140 57.1
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.0e-35 156.0 95 73.7
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 4.2e-34 150.6 95 71.6
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.6e-33 148.7 95 69.5
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 1.1e-31 142.5 95 69.5
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 2.4e-29 134.8 95 67.4
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 2.6e-28 131.3 95 63.2
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 6.5e-27 126.7 71 81.7
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.7e-25 121.3 69 78.3
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.7e-24 116.7 66 78.8
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 7.4e-23 113.2 398 54.8
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 9.4e-18 96.3 62 64.5
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 2.6e-07 61.6 208 25.0
SMO364G0905 Selaginella moellendorffii HOM05D031156 ORTHO05D000355 2.2e-06 58.5 227 25.1
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 3.7e-06 57.8 147 28.6
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 3.7e-06 57.8 180 25.6


User provided reference genes

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