Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001259 Solanum tuberosum HOM05D063890 ORTHO05D012657 1.1e-134 483.4 252 100.0
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 3.5e-13 79.7 54 68.5
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 3.5e-13 79.7 54 68.5
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 1.3e-12 77.8 54 66.7
Peaxi162Scf00164g00093 Petunia axillaris HOM05D011468 ORTHO05D012657 1.2e-10 71.2 123 44.7
PGSC0003DMG400032834 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.2e-10 71.2 128 44.5
CAN.G135.45 Capsicum annuum HOM05D063890 ORTHO05D012657 6.2e-10 68.9 146 37.0
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 8.1e-10 68.6 49 63.3
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.1e-09 68.2 122 41.8
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 3.1e-09 66.6 60 51.7
Dinv43216 Davidia involucrata HOM05D003779 ORTHO05D002678 3.1e-09 66.6 60 51.7
Nitab4.5_0009783g0050 Nicotiana tabacum HOM05D000621 ORTHO05D012657 3.1e-09 66.6 89 48.3
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 4.0e-09 66.2 54 59.3
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 4.0e-09 66.2 54 59.3
Nitab4.5_0012301g0020 Nicotiana tabacum HOM05D000621 ORTHO05D012657 6.8e-09 65.5 252 29.0
EL10Ac8g18849 Beta vulgaris HOM05D003779 ORTHO05D002678 5.8e-08 62.4 52 51.9
PGSC0003DMG400020675 Solanum tuberosum HOM05D011468 ORTHO05D012657 7.6e-08 62.0 103 43.7
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 2.9e-07 60.1 56 53.6
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 2.9e-07 60.1 47 55.3
Oeu050477.1 Olea europaea HOM05D003779 ORTHO05D002678 3.7e-07 59.7 50 54.0
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 3.7e-07 59.7 58 48.3
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 3.7e-07 59.7 47 59.6
AUR62039744 Chenopodium quinoa HOM05D003779 ORTHO05D002678 8.3e-07 58.5 52 50.0
Lj9C714G7 Lonicera japonica HOM05D003779 ORTHO05D002678 8.3e-07 58.5 50 52.0
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 1.1e-06 58.2 65 50.8
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 1.4e-06 57.8 51 52.9
Oeu026546.1 Olea europaea HOM05D003779 ORTHO05D002678 1.4e-06 57.8 50 52.0
Oeu026547.1 Olea europaea HOM05D003779 ORTHO05D002678 1.4e-06 57.8 50 52.0
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 1.4e-06 57.8 57 45.6
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 1.9e-06 57.4 46 54.3
CSS0005827 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 2.4e-06 57.0 57 49.1
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 2.4e-06 57.0 59 49.2
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 2.4e-06 57.0 50 50.0
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 3.2e-06 56.6 46 58.7
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 4.1e-06 56.2 68 41.2
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 4.1e-06 56.2 50 50.0
PGSC0003DMG400003502 Solanum tuberosum HOM05D011468 ORTHO05D012657 4.1e-06 56.2 72 55.6
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 5.4e-06 55.8 48 56.2
A10p16130 Brassica napus HOM05D003779 ORTHO05D002678 5.4e-06 55.8 52 50.0
BraA10t43616Z Brassica rapa HOM05D003779 ORTHO05D002678 5.4e-06 55.8 52 50.0
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 5.4e-06 55.8 47 55.3
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 5.4e-06 55.8 59 49.2
PGSC0003DMG401019602 Solanum tuberosum HOM05D011468 ORTHO05D012657 7.1e-06 55.5 50 62.0
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 9.2e-06 55.1 52 50.0
Solyc09g015135.1 Solanum lycopersicum HOM05D011468 ORTHO05D012657 9.2e-06 55.1 70 52.9


User provided reference genes

Program Settings