Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.4e-153 546.2 265 100.0
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 5.0e-87 325.1 255 62.0
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 6.6e-87 324.7 255 61.2
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.5e-86 323.6 262 59.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 1.6e-85 320.1 261 59.4
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 2.1e-85 319.7 267 61.8
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.7e-85 318.5 258 61.2
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.4e-84 317.0 259 58.7
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 2.3e-84 316.2 255 61.2
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.2e-83 313.9 262 59.5
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 5.8e-83 311.6 259 61.4
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 7.5e-83 311.2 259 58.3
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 9.8e-83 310.8 258 60.1
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.9e-82 309.3 259 60.6
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 2.4e-81 306.2 259 59.8
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 2.4e-81 306.2 265 58.9
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 9.2e-81 304.3 257 59.9
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 9.2e-81 304.3 263 55.9
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.2e-80 303.9 257 59.9
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.7e-80 302.8 265 54.7
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 7.8e-80 301.2 262 55.7
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 6.6e-79 298.1 258 59.3
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 8.6e-79 297.7 265 54.3
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 1.5e-78 297.0 263 57.0
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 2.5e-78 296.2 257 58.8
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 2.5e-78 296.2 265 54.0
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 2.5e-78 296.2 263 57.0
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 3.3e-78 295.8 264 55.7
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 4.3e-78 295.4 256 56.2
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 5.6e-78 295.0 262 57.3
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.6e-78 295.0 262 57.6
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 5.6e-78 295.0 255 56.9
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 7.3e-78 294.7 261 56.3
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.2e-77 293.9 264 54.9
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 1.6e-77 293.5 257 56.8
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.6e-77 293.5 257 56.8
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 2.1e-77 293.1 263 53.6
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.1e-77 293.1 257 56.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 2.1e-77 293.1 257 56.4
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 2.8e-77 292.7 254 58.3
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.6e-77 292.4 257 56.4
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 4.7e-77 292.0 262 56.9
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 6.2e-77 291.6 259 56.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 8.0e-77 291.2 257 56.4
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 8.0e-77 291.2 257 56.4
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 8.0e-77 291.2 256 56.2
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 3.1e-76 289.3 261 54.4
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 4.0e-76 288.9 266 57.1
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.0e-76 288.9 257 56.0
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 6.8e-76 288.1 263 56.7
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 8.9e-76 287.7 266 54.9
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 8.9e-76 287.7 255 55.3
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 8.9e-76 287.7 254 57.9
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 8.9e-76 287.7 265 56.6
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 2.6e-75 286.2 269 55.4
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 5.8e-75 285.0 255 54.9
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 1.3e-74 283.9 266 57.1
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 1.3e-74 283.9 266 57.1
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 1.3e-74 283.9 266 57.1
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.3e-74 283.9 262 53.1
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 1.7e-74 283.5 262 54.6
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 2.2e-74 283.1 259 54.8
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.2e-74 283.1 257 54.5
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 2.9e-74 282.7 259 54.8
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 3.7e-74 282.3 266 54.5
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 3.7e-74 282.3 268 55.2
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 3.7e-74 282.3 266 52.3
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 6.4e-74 281.6 257 53.3
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.1e-73 280.8 258 55.8
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 1.1e-73 280.8 267 54.7
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.4e-73 280.4 323 48.0
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 1.9e-73 280.0 269 55.4
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.9e-73 280.0 256 52.7
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 7.0e-73 278.1 224 59.8
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 2.1e-72 276.6 256 52.7
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 4.6e-72 275.4 256 52.3
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 3.9e-71 272.3 259 51.7
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.1e-70 270.8 261 53.6
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 1.5e-70 270.4 256 51.6
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 1.5e-70 270.4 259 51.0
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 2.5e-70 269.6 263 51.3
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 4.3e-70 268.9 270 51.9
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 4.3e-70 268.9 262 50.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 4.7e-69 265.4 257 53.3
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.5e-67 260.4 267 51.3
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 8.3e-66 254.6 228 57.5
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 2.4e-65 253.1 214 57.5
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 2.7e-64 249.6 227 56.4
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 1.3e-63 247.3 234 53.8
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.5e-62 243.8 235 52.3
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.9e-62 243.4 239 52.3
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 4.3e-62 242.3 261 46.0
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 7.3e-62 241.5 228 54.8
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 4.2e-57 225.7 254 45.3
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 6.0e-56 221.9 254 44.1
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 5.1e-55 218.8 230 49.6
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.4e-52 210.7 266 42.5
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 4.9e-50 202.2 164 58.5
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 1.9e-49 200.3 165 56.4
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.9e-49 200.3 237 44.3
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.5e-40 169.5 153 54.2
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 1.0e-39 167.9 185 48.1
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-39 167.2 157 50.3
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-39 167.2 157 50.3
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-39 167.2 157 50.3
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.3e-39 166.8 155 52.3
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 4.8e-37 159.1 282 33.7
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 3.1e-36 156.4 252 34.9
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 2.6e-35 153.3 152 50.0
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.9e-34 149.8 154 50.6
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 1.0e-31 141.4 234 35.9
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 3.0e-31 139.8 121 49.6
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 5.7e-30 135.6 110 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 7.4e-30 135.2 252 31.7
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 8.2e-29 131.7 172 44.8
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 4.0e-28 129.4 109 53.2
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 7.1e-25 118.6 105 55.2
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 3.0e-23 113.2 119 50.4
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.6e-21 107.5 162 43.8
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 5.3e-20 102.4 80 60.0
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 9.0e-20 101.7 82 53.7
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 7.7e-19 98.6 84 59.5
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.4e-17 94.4 95 48.4
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 2.5e-17 93.6 78 61.5
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 3.3e-14 83.2 166 33.7
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.3e-13 81.3 97 47.4
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 4.8e-13 79.3 67 52.2
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 5.3e-12 75.9 164 32.3
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 1.1e-09 68.2 48 60.4
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 1.8e-07 60.8 59 54.2
HanXRQChr12g0360941 Helianthus annuus HOM05D005673 ORTHO05D007081 5.7e-06 55.8 44 54.5


User provided reference genes

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