Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 6.3e-227 790.4 398 100.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.6e-148 529.3 409 66.7
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.9e-147 525.8 394 70.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.5e-146 522.7 411 67.2
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.5e-146 522.7 406 65.3
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.6e-145 518.8 409 64.5
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 7.9e-145 517.7 390 66.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.5e-143 513.5 409 64.1
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 4.4e-143 511.9 419 65.6
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.3e-142 510.4 411 63.3
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.1e-141 507.3 412 64.8
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.8e-141 506.5 394 64.5
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 5.3e-141 505.0 407 65.1
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 3.5e-140 502.3 393 66.9
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.0e-139 500.7 402 65.9
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.3e-139 500.4 397 65.0
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.7e-139 500.0 404 66.1
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.2e-139 499.6 416 63.0
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.9e-139 499.2 399 66.2
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 5.0e-139 498.4 399 65.9
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 8.5e-139 497.7 416 62.7
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 8.5e-139 497.7 399 65.9
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.5e-138 496.9 411 63.3
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 4.2e-138 495.4 388 64.7
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 5.5e-138 495.0 394 65.0
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 5.5e-138 495.0 410 62.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 7.2e-138 494.6 413 65.9
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.2e-137 493.8 404 65.8
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 3.6e-137 492.3 404 62.9
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 4.7e-137 491.9 413 64.9
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 8.0e-137 491.1 407 63.1
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.8e-136 490.0 411 62.3
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.3e-136 489.6 393 62.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.0e-136 489.2 400 63.5
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 5.2e-136 488.4 411 62.0
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 6.7e-136 488.0 393 62.6
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.1e-135 487.3 418 62.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.5e-135 486.9 412 61.2
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.5e-135 486.9 412 61.2
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.5e-135 486.9 393 62.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 9.7e-135 484.2 410 61.7
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 4.8e-134 481.9 405 60.5
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 8.2e-134 481.1 406 61.1
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.1e-133 479.2 420 61.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 7.0e-133 478.0 405 63.5
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 7.0e-133 478.0 369 65.6
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 3.5e-132 475.7 388 62.6
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.1e-130 470.7 399 64.4
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.2e-129 467.2 412 62.1
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 3.0e-128 462.6 412 62.4
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 4.0e-128 462.2 412 60.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.4e-127 459.1 363 66.9
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 5.7e-127 458.4 404 62.1
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 1.1e-125 454.1 391 61.9
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.8e-125 453.4 390 62.8
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 2.4e-125 453.0 408 62.0
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 3.1e-125 452.6 404 60.6
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.1e-125 452.6 432 57.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 9.1e-125 451.1 404 60.4
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 2.2e-123 446.4 423 56.3
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 8.5e-123 444.5 410 59.3
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.9e-122 443.4 406 61.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 3.2e-122 442.6 395 60.5
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.2e-122 442.6 395 60.8
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 4.2e-122 442.2 381 60.9
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.0e-120 437.6 413 60.3
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 5.2e-120 435.3 392 58.4
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 2.8e-118 429.5 344 63.4
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 2.8e-118 429.5 410 57.8
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.8e-118 428.7 333 64.9
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 6.3e-118 428.3 398 58.8
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 6.3e-118 428.3 384 57.6
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.4e-117 427.2 411 57.7
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 3.1e-117 426.0 412 57.0
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.2e-116 424.1 363 62.8
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.6e-116 423.7 407 55.5
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.6e-116 423.7 395 57.2
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 3.5e-116 422.5 402 57.0
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.6e-115 417.9 408 56.9
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.5e-114 416.4 455 51.4
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 8.3e-110 401.4 310 66.5
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.3e-110 401.4 394 55.3
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.0e-108 396.7 392 53.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.7e-108 396.4 426 52.3
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.9e-106 390.2 393 55.5
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.6e-103 379.8 351 54.1
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 3.5e-100 369.4 355 57.2
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.0e-99 367.9 349 56.4
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.2e-97 360.9 407 51.6
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 6.4e-94 348.6 462 45.5
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 3.2e-93 346.3 322 54.7
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.1e-92 343.6 398 46.5
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.1e-91 339.0 358 55.0
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-90 337.8 327 56.6
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 3.6e-89 332.8 420 45.7
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-89 332.4 334 55.1
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.1e-89 331.6 336 54.8
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.9e-86 323.2 294 58.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-86 322.4 294 58.5
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-86 322.4 294 58.5
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-86 322.4 294 58.5
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 4.0e-80 302.8 294 54.1
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.9e-78 296.6 219 69.4
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.0e-71 273.9 278 54.0
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.9e-67 259.6 243 55.6
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.5e-66 257.7 212 64.2
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 9.0e-64 248.4 223 59.6
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.7e-52 210.3 601 29.6
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.9e-31 139.4 176 43.8
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 7.7e-31 139.0 88 77.3
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.6e-28 131.3 133 53.4
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.1e-24 117.1 210 38.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.0e-22 109.8 171 39.8
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-20 105.1 120 46.7
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-12 76.3 75 68.0
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-12 76.3 75 68.0
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-12 76.3 75 68.0
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 2.0e-10 71.2 55 74.5
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 2.8e-09 67.4 47 66.0
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.3e-09 65.9 59 54.2


User provided reference genes

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