Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 3.8e-216 754.6 392 100.0
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 1.8e-112 410.2 405 56.8
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 2.6e-108 396.4 405 55.1
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 3.8e-107 392.5 401 55.9
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 1.3e-104 384.0 405 53.6
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 2.3e-104 383.3 399 53.9
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 5.1e-104 382.1 397 55.7
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 6.7e-104 381.7 406 53.7
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 1.1e-103 380.9 399 53.9
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 1.5e-103 380.6 405 53.8
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 1.1e-98 364.4 397 53.1
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 3.2e-98 362.8 397 53.1
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 5.5e-98 362.1 392 54.3
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.6e-97 360.5 402 51.7
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 2.7e-97 359.8 395 53.7
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.0e-96 357.8 398 52.0
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 2.6e-95 353.2 407 51.1
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 3.3e-95 352.8 401 51.6
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 4.4e-95 352.4 414 50.2
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 1.7e-94 350.5 405 49.6
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 6.3e-94 348.6 402 53.0
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 8.2e-94 348.2 397 51.4
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 5.3e-93 345.5 391 52.2
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 4.5e-92 342.4 399 50.1
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.3e-91 340.9 404 50.7
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 1.3e-91 340.9 413 49.9
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.7e-91 340.5 443 47.2
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 5.5e-90 335.5 406 48.3
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 5.5e-90 335.5 398 48.7
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 7.2e-90 335.1 410 48.5
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 3.6e-89 332.8 410 48.8
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 4.7e-89 332.4 396 50.5
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 1.8e-88 330.5 386 49.5
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 1.8e-88 330.5 391 48.8
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 3.9e-88 329.3 325 57.5
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 8.8e-88 328.2 394 47.7
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 1.1e-87 327.8 391 50.6
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 4.4e-87 325.9 408 49.8
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 5.7e-87 325.5 363 52.1
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 1.3e-86 324.3 348 53.7
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.3e-86 324.3 392 50.5
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.8e-85 320.5 362 52.8
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 2.4e-85 320.1 392 47.7
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 3.1e-85 319.7 401 48.4
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 1.6e-84 317.4 396 47.2
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 1.6e-84 317.4 365 51.8
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 2.0e-84 317.0 404 48.0
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 3.5e-84 316.2 365 51.8
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.3e-83 314.3 394 49.0
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 6.5e-83 312.0 392 48.0
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 8.5e-83 311.6 375 50.9
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 2.5e-82 310.1 397 47.9
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 3.2e-82 309.7 382 48.2
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 7.2e-82 308.5 321 53.3
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.2e-81 307.8 397 46.3
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 1.2e-81 307.8 386 46.4
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.6e-81 307.4 343 53.9
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 2.7e-81 306.6 381 45.9
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 4.7e-81 305.8 352 49.4
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 6.1e-81 305.4 393 47.1
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 6.1e-81 305.4 393 47.1
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 6.1e-81 305.4 396 46.7
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 1.0e-80 304.7 396 46.2
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 1.4e-80 304.3 386 47.4
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.8e-80 303.9 358 48.6
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 6.7e-80 302.0 386 45.9
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 2.6e-79 300.1 404 44.8
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 3.3e-79 299.7 391 46.0
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 3.3e-79 299.7 408 43.9
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 5.7e-79 298.9 386 46.9
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 1.3e-78 297.7 399 46.1
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.3e-78 297.7 392 46.4
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 1.7e-78 297.4 363 47.9
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 2.8e-78 296.6 400 45.0
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 4.1e-77 292.7 392 44.4
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 5.3e-77 292.4 362 48.1
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 1.2e-76 291.2 328 51.5
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 1.6e-76 290.8 346 46.5
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 4.5e-76 289.3 410 43.9
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 8.5e-75 285.0 323 51.1
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 2.5e-74 283.5 388 43.0
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 5.5e-74 282.3 397 44.8
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 9.4e-74 281.6 399 44.1
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 4.7e-73 279.3 398 44.5
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 6.1e-73 278.9 395 45.8
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 8.0e-73 278.5 327 48.9
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 3.0e-72 276.6 385 42.3
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 1.2e-71 274.6 387 43.7
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 1.5e-71 274.2 340 49.1
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 4.8e-70 269.2 396 43.7
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 4.8e-70 269.2 326 49.1
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 1.8e-69 267.3 393 43.0
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 5.4e-69 265.8 393 42.5
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 1.2e-68 264.6 393 42.5
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 2.7e-68 263.5 387 42.1
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 3.8e-67 259.6 396 40.4
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 5.0e-67 259.2 390 42.3
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 4.2e-66 256.1 392 42.1
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 9.8e-63 245.0 331 45.0
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 1.4e-61 241.1 336 44.0
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.5e-58 231.1 395 39.7
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 1.0e-56 224.9 291 45.4
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 2.3e-56 223.8 174 61.5
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 5.9e-52 209.1 301 40.9
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 2.3e-51 207.2 216 47.7
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 4.3e-50 203.0 247 46.6
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 3.7e-46 189.9 441 32.4
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 1.6e-44 184.5 205 45.9
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.8e-40 171.0 226 48.2
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 3.5e-36 156.8 150 50.7
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 3.1e-32 143.7 424 28.5
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 8.6e-27 125.6 423 27.0
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 4.7e-25 119.8 185 45.9
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 1.1e-21 108.6 194 38.7
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 4.6e-20 103.2 271 32.5
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 4.6e-20 103.2 92 51.1
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 9.0e-16 89.0 83 57.8
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 9.9e-15 85.5 102 50.0
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 7.9e-12 75.9 152 36.2
CBR_g23342 Chara braunii HOM05D005759 ORTHO05D002561 3.7e-09 67.0 454 24.0
FAN01G1973 Fragaria x ananassa HOM05D005759 ORTHO05D007172 2.4e-08 64.3 321 29.0
Ca_11766_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 7.6e-07 59.3 37 70.3
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 2.9e-06 57.4 108 39.8
AUR62018607 Chenopodium quinoa HOM05D000032 ORTHO05D007444 6.4e-06 56.2 207 26.6
Hma1.2p1_0803F.1_g220720 Hydrangea macrophylla HOM05D000032 ORTHO05D007444 6.4e-06 56.2 236 24.6


User provided reference genes

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