Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0868 Punica granatum HOM05D009820 ORTHO05D011171 4.5e-95 351.3 184 100.0
Atru.chr12.1461 Acer truncatum HOM05D009820 ORTHO05D011171 6.7e-22 108.2 139 46.0
Atru.chr12.1466 Acer truncatum HOM05D009820 ORTHO05D011171 1.1e-21 107.5 139 45.3
TAR374G1519 Trochodendron aralioides HOM05D009820 ORTHO05D011171 7.4e-21 104.8 136 45.6
Thecc.02G188800 Theobroma cacao HOM05D009820 ORTHO05D011171 9.7e-21 104.4 134 48.5
Sabra01G0049200 Salix brachista HOM05D009820 ORTHO05D011171 4.8e-20 102.1 80 61.2
Eucgr.J01652 Eucalyptus grandis HOM05D009820 ORTHO05D011171 2.0e-18 96.7 97 51.5
Potri.001G070200 Populus trichocarpa HOM05D009820 ORTHO05D011171 1.3e-17 94.0 190 35.8
Dinv14392 Davidia involucrata HOM05D009820 ORTHO05D011171 1.7e-17 93.6 191 32.5
Gohir.D02G176500 Gossypium hirsutum HOM05D009820 ORTHO05D011171 3.8e-17 92.4 171 39.8
Nn3g16210 Nelumbo nucifera HOM05D000742 ORTHO05D011171 8.5e-17 91.3 133 40.6
Gorai.005G198200 Gossypium raimondii HOM05D009820 ORTHO05D011171 1.4e-16 90.5 175 39.4
RcHm_v2.0_Chr4g0428451 Rosa chinensis HOM05D009820 ORTHO05D011171 5.5e-16 88.6 78 52.6
Aqoxy271s004 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 9.4e-16 87.8 92 46.7
Aqoxy5G02999 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 9.4e-16 87.8 92 46.7
Nn3g16209 Nelumbo nucifera HOM05D000742 ORTHO05D011171 9.4e-16 87.8 97 50.5
Gohir.A03G153600 Gossypium hirsutum HOM05D009820 ORTHO05D011171 1.2e-15 87.4 175 38.3
FAN07G1429 Fragaria x ananassa HOM05D009820 ORTHO05D011171 2.1e-15 86.7 78 51.3
Manes.08G099600 Manihot esculenta HOM05D009820 ORTHO05D011171 2.1e-15 86.7 179 34.1
GSVIVG01001118001 Vitis vinifera HOM05D004039 ORTHO05D011171 2.1e-15 86.7 136 36.8
CDE06G0636 Ceratophyllum demersum HOM05D009820 ORTHO05D011171 4.7e-15 85.5 95 44.2
Prupe.1G211900 Prunus persica HOM05D009820 ORTHO05D011171 1.0e-14 84.3 180 34.4
FAN17G1765 Fragaria x ananassa HOM05D009820 ORTHO05D011171 1.8e-14 83.6 180 34.4
CDE02G3752 Ceratophyllum demersum HOM05D000742 ORTHO05D011171 6.7e-14 81.6 100 43.0
FvH4_4g22220 Fragaria vesca HOM05D009820 ORTHO05D011171 4.4e-13 79.0 168 36.9
FAN12G0969 Fragaria x ananassa HOM05D009820 ORTHO05D011171 9.7e-13 77.8 167 35.9
FAN12G3761 Fragaria x ananassa HOM05D009820 ORTHO05D011171 9.7e-13 77.8 167 35.9
PSO832G1700 Papaver somniferum HOM05D009820 ORTHO05D011171 4.8e-12 75.5 86 41.9
PSO591G0105 Papaver somniferum HOM05D009820 ORTHO05D011171 8.2e-12 74.7 86 41.9
HPP92_023044 Vanilla planifolia HOM05D043096 ORTHO05D011171 1.4e-11 73.9 159 34.6
MBI07_g42008_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D011171 3.1e-11 72.8 82 42.7
CANSAT25G0662 Cannabis sativa HOM05D009820 ORTHO05D011171 2.6e-10 69.7 67 55.2
Pp3c19_9760 Physcomitrium patens HOM05D000742 ORTHO05D000924 1.7e-09 67.0 110 37.3
Pp3c23_20750 Physcomitrium patens HOM05D000742 ORTHO05D000924 2.9e-09 66.2 143 35.0
SEGI_34196 Sequoiadendron giganteum HOM05D000742 ORTHO05D003741 5.0e-09 65.5 82 40.2
Pp3c22_22390 Physcomitrium patens HOM05D000742 ORTHO05D000924 8.5e-09 64.7 120 33.3
ATR0564G409 Amborella trichopoda HOM05D000742 ORTHO05D003741 1.9e-08 63.5 73 41.1
Migut.L01317 Erythranthe guttata HOM05D000742 ORTHO05D003741 1.9e-08 63.5 77 36.4
Cpa.g.sc14.16 Carica papaya HOM05D000742 ORTHO05D003741 9.4e-08 61.2 67 37.3
Pp3c18_3230 Physcomitrium patens HOM05D000742 ORTHO05D000924 9.4e-08 61.2 110 33.6
Ca_02742_v3 Cicer arietinum L. HOM05D000742 ORTHO05D003741 1.2e-07 60.8 69 39.1
Medtr7g010100 Medicago truncatula HOM05D000742 ORTHO05D003741 1.2e-07 60.8 157 28.7
Os04g0641400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D003741 1.6e-07 60.5 73 38.4
VMungo1383G2053 Vigna mungo HOM05D000742 ORTHO05D003741 1.6e-07 60.5 67 40.3
Psat3g196400 Pisum sativum HOM05D000742 ORTHO05D003741 4.7e-07 58.9 154 29.2
SEGI_14673 Sequoiadendron giganteum HOM05D000742 ORTHO05D003741 4.7e-07 58.9 94 34.0
Aqoxy3G00703 Aquilegia oxysepala HOM05D000742 ORTHO05D003741 6.1e-07 58.5 71 38.0
ClCG09G016890 Citrullus lanatus HOM05D000742 ORTHO05D000924 6.1e-07 58.5 74 35.1
Oeu020208.2 Olea europaea HOM05D000742 ORTHO05D000924 6.1e-07 58.5 82 31.7
MBI02_g33380_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D003741 8.0e-07 58.2 73 37.0
Phvul.008G041900 Phaseolus vulgaris HOM05D000742 ORTHO05D003741 8.0e-07 58.2 67 40.3
SalBow8G1497 Salvia bowleyana HOM05D000742 ORTHO05D003741 8.0e-07 58.2 111 29.7
Sed0019813 Sechium edule HOM05D000742 ORTHO05D000924 8.0e-07 58.2 151 28.5
Zm00001eb068910 Zea mays HOM05D000742 ORTHO05D003741 8.0e-07 58.2 73 39.7
Sabra13G0049600 Salix brachista HOM05D004225 ORTHO05D004728 1.0e-06 57.8 74 37.8
Potri.013G055100 Populus trichocarpa HOM05D000742 ORTHO05D000924 1.4e-06 57.4 74 37.8
Sed0007997 Sechium edule HOM05D000742 ORTHO05D000924 1.4e-06 57.4 74 36.5
vmacro05717 Vaccinium macrocarpon HOM05D000742 ORTHO05D003741 1.4e-06 57.4 67 37.3
VMungo1215G1061 Vigna mungo HOM05D000742 ORTHO05D000924 1.4e-06 57.4 74 33.8
Actinidia38431 Actinidia chinensis HOM05D000742 ORTHO05D000924 2.3e-06 56.6 143 30.1
Aa31LG5G12400 Aethionema arabicum HOM05D000742 ORTHO05D003741 2.3e-06 56.6 66 40.9
Cpa.g.sc161.3 Carica papaya HOM05D000742 ORTHO05D000924 2.3e-06 56.6 74 35.1
Eucgr.A02974 Eucalyptus grandis HOM05D000742 ORTHO05D000924 2.3e-06 56.6 145 28.3
Hund13224 Selenicereus undatus HOM05D000742 ORTHO05D003741 2.3e-06 56.6 90 33.3
SGA_v2.0_scaffold302G47837 Striga asiatica HOM05D000742 ORTHO05D003741 2.3e-06 56.6 73 35.6
THA.LOC104825573 Tarenaya hassleriana HOM05D000742 ORTHO05D000924 2.3e-06 56.6 74 33.8
TWI60G1363 Tripterygium wilfordii HOM05D000742 ORTHO05D003741 2.3e-06 56.6 67 38.8
ATR0021G009 Amborella trichopoda HOM05D000742 ORTHO05D000924 3.0e-06 56.2 74 35.1
CsaV3_4G012160 Cucumis sativus L. HOM05D000742 ORTHO05D000924 3.0e-06 56.2 80 33.8
ECA246G4740 Erigeron canadensis HOM05D000742 ORTHO05D003741 3.0e-06 56.2 83 33.7
Glyma.09G239200 Glycine max HOM05D000742 ORTHO05D003741 3.0e-06 56.2 157 28.0
Nitab4.5_0001108g0060 Nicotiana tabacum HOM05D000742 ORTHO05D000924 3.0e-06 56.2 69 40.6
Sabra19G0048900 Salix brachista HOM05D000742 ORTHO05D000924 3.0e-06 56.2 74 36.5
Atru.chr8.129 Acer truncatum HOM05D000742 ORTHO05D003741 4.0e-06 55.8 67 35.8
Aqoxy3G04060 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 4.0e-06 55.8 139 28.1
Cfa026230 Carpinus fangiana HOM05D000742 ORTHO05D126223 4.0e-06 55.8 103 34.0
MELO3C021980.2 Cucumis melo HOM05D000742 ORTHO05D003741 4.0e-06 55.8 99 35.4
CsaV3_5G037940 Cucumis sativus L. HOM05D000742 ORTHO05D003741 4.0e-06 55.8 91 36.3
PSO717G0142 Papaver somniferum HOM05D000742 ORTHO05D000924 4.0e-06 55.8 143 28.0
Pp3c20_4940 Physcomitrium patens HOM05D000742 ORTHO05D000924 4.0e-06 55.8 143 32.9
Haze_20471 Corylus avellana HOM05D000742 ORTHO05D000924 5.2e-06 55.5 74 35.1
Dinv25098 Davidia involucrata HOM05D000742 ORTHO05D000924 5.2e-06 55.5 74 35.1
Glyma.18G258600 Glycine max HOM05D000742 ORTHO05D003741 5.2e-06 55.5 157 28.0
Medtr8g105910 Medicago truncatula HOM05D000742 ORTHO05D000924 5.2e-06 55.5 143 28.7
Nitab4.5_0000274g0110 Nicotiana tabacum HOM05D000742 ORTHO05D003741 5.2e-06 55.5 77 35.1
Potri.019G037600 Populus trichocarpa HOM05D000742 ORTHO05D000924 5.2e-06 55.5 74 36.5
PGSC0003DMG402007209 Solanum tuberosum HOM05D000742 ORTHO05D000924 5.2e-06 55.5 126 29.4
Zm00001eb431910 Zea mays HOM05D000742 ORTHO05D003741 5.2e-06 55.5 73 37.0
Aqoxy6G02089 Aquilegia oxysepala HOM05D000742 ORTHO05D003741 6.7e-06 55.1 70 32.9
CSS0000597 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D003741 6.7e-06 55.1 67 38.8
PGR142G2551 Punica granatum HOM05D000742 ORTHO05D000924 6.7e-06 55.1 70 35.7
Rhsim10G0041000 Rhododendron simsii HOM05D000742 ORTHO05D003741 6.7e-06 55.1 67 34.3
Sopen10g028580 Solanum pennellii HOM05D000742 ORTHO05D000924 6.7e-06 55.1 126 28.6
SGA_v2.0_scaffold44G16899 Striga asiatica HOM05D000742 ORTHO05D000924 6.7e-06 55.1 146 28.1
ATR0697G118 Amborella trichopoda HOM05D000742 ORTHO05D000924 8.8e-06 54.7 76 36.8
CSS0034082 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 8.8e-06 54.7 145 26.2
FvH4_4g31610 Fragaria vesca HOM05D000742 ORTHO05D003741 8.8e-06 54.7 73 35.6
FAN12G2841 Fragaria x ananassa HOM05D000742 ORTHO05D003741 8.8e-06 54.7 73 35.6
FAN22G1453 Fragaria x ananassa HOM05D000742 ORTHO05D003741 8.8e-06 54.7 73 35.6
Phvul.001G113300 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 8.8e-06 54.7 74 33.8
Solyc10g076890.3 Solanum lycopersicum HOM05D000742 ORTHO05D000924 8.8e-06 54.7 126 28.6
unitig_22.g5543 Utricularia gibba HOM05D000742 ORTHO05D003741 8.8e-06 54.7 80 32.5


User provided reference genes

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