Gene: Sopen10g028580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g028580
  • Transcript Identifier Sopen10g028580.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 76552910-76557678 : positive

Gene Family Information

  • ID HOM05D000742
  • #Genes/#Species 786/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g028580.1

Descriptions

  • Description RNA binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding | INVOLVED IN: oxidation reduction | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldo/keto reductase , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G32450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G32450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G32450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034360 Vip1-like, RNA recognition motif, plant
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated