Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.4e-176 623.2 324 100.0
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 2.4e-144 516.2 324 83.3
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 1.3e-139 500.4 323 82.7
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 3.0e-139 499.2 330 79.4
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 8.7e-139 497.7 323 80.2
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 1.5e-138 496.9 325 80.3
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.9e-138 496.5 330 79.4
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.1e-137 493.0 330 79.4
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 4.8e-137 491.9 326 78.2
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 6.2e-137 491.5 326 78.8
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.8e-136 490.0 326 78.2
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 6.9e-136 488.0 319 82.1
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 2.6e-135 486.1 324 79.9
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 3.4e-135 485.7 329 79.3
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 4.5e-135 485.3 357 74.2
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 5.8e-135 485.0 325 79.1
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 5.8e-135 485.0 325 79.1
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 1.0e-134 484.2 327 79.5
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.7e-134 483.4 326 78.8
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.7e-134 483.4 322 80.1
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 3.8e-134 482.3 328 79.0
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 3.2e-133 479.2 330 77.9
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 4.2e-133 478.8 314 79.9
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 5.5e-133 478.4 329 77.5
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.6e-132 476.9 332 77.1
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.0e-131 474.2 326 77.6
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 1.8e-131 473.4 323 78.3
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 1.8e-131 473.4 330 77.6
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 1.8e-131 473.4 354 72.9
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.5e-130 469.5 329 76.0
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 2.5e-130 469.5 337 75.1
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 7.4e-130 468.0 319 76.8
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.7e-130 467.6 340 74.7
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.7e-130 467.6 340 74.7
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 6.3e-129 464.9 352 73.6
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 6.3e-129 464.9 326 77.0
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 8.2e-129 464.5 328 76.5
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.1e-128 464.2 321 76.9
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 4.1e-128 462.2 330 76.4
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 5.3e-128 461.8 325 76.3
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 5.3e-128 461.8 322 76.1
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 9.0e-128 461.1 338 73.7
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 2.0e-127 459.9 323 78.3
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 5.9e-127 458.4 327 74.0
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 7.7e-127 458.0 274 83.9
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.1e-125 454.1 310 76.1
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.1e-125 454.1 327 74.3
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 1.4e-125 453.8 330 75.8
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.4e-125 453.8 329 74.2
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 1.9e-125 453.4 332 72.9
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.2e-125 452.6 321 76.9
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-124 449.5 322 77.0
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-124 449.5 322 77.0
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 2.7e-124 449.5 325 74.5
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.7e-124 449.5 354 71.2
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 3.6e-124 449.1 319 73.4
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 1.0e-123 447.6 329 72.9
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.0e-123 447.6 267 85.8
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 1.4e-123 447.2 321 74.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 5.1e-123 445.3 333 73.0
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 8.8e-123 444.5 323 72.1
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 2.0e-122 443.4 260 86.5
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.5e-122 443.0 337 73.3
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 4.3e-122 442.2 325 74.2
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.2e-121 439.9 329 70.2
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 2.8e-121 439.5 293 78.2
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 3.7e-121 439.1 323 75.2
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 4.8e-121 438.7 322 72.0
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 4.8e-121 438.7 262 86.3
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 1.1e-120 437.6 325 71.4
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.1e-120 437.6 329 69.9
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 1.4e-120 437.2 322 74.5
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 6.9e-120 434.9 325 72.0
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 1.5e-119 433.7 327 72.5
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 2.6e-119 433.0 330 69.4
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 2.6e-119 433.0 327 70.0
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 2.6e-119 433.0 317 74.1
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 7.7e-119 431.4 325 70.2
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.0e-118 431.0 326 69.9
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.3e-118 430.6 327 69.7
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.7e-118 430.3 326 70.2
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.2e-118 429.9 320 72.2
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 2.9e-118 429.5 323 70.3
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 3.8e-118 429.1 328 69.5
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 6.5e-118 428.3 353 67.7
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.2e-117 426.0 332 73.2
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 5.1e-115 418.7 315 70.2
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 8.8e-115 417.9 405 60.5
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.3e-113 414.1 320 68.8
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.3e-113 414.1 323 69.3
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.0e-111 406.8 294 75.2
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 1.1e-109 401.0 335 66.6
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 5.5e-109 398.7 323 69.3
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 7.2e-109 398.3 324 68.2
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.1e-108 396.7 299 73.9
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 5.2e-107 392.1 241 81.7
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.6e-106 389.8 299 73.9
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 3.7e-105 386.0 240 79.6
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 4.0e-99 365.9 316 61.7
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 1.5e-98 364.0 267 68.2
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 7.5e-98 361.7 269 67.3
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 2.5e-93 346.7 275 66.2
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.2e-93 346.3 227 80.6
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 7.2e-93 345.1 266 66.2
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 9.4e-93 344.7 268 65.3
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.7e-89 334.0 317 56.5
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.7e-89 334.0 317 56.5
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 3.7e-89 332.8 357 56.0
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 4.5e-87 325.9 245 69.0
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.9e-86 323.2 322 58.7
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.1e-84 317.0 329 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 2.3e-83 313.5 265 59.2
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.8e-80 303.9 340 55.6
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 2.0e-79 300.4 328 50.9
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 6.8e-75 285.4 274 60.2
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-73 281.2 204 75.5
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 3.2e-72 276.6 170 85.9
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.0e-71 273.9 208 67.3
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.0e-54 218.4 207 57.5
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-49 201.1 153 72.5
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 3.0e-46 190.3 106 83.0
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-31 141.7 112 72.3
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 8.1e-28 129.0 108 60.2
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 4.0e-27 126.7 93 65.6
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.7e-20 103.6 101 63.4
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 3.4e-18 97.1 290 31.0
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.7e-17 94.7 257 30.4
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.9e-17 94.0 113 46.0
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 5.0e-17 93.2 62 64.5
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 6.1e-07 59.7 38 71.1


User provided reference genes

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