Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.4e-130 468.8 222 100.0
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 5.7e-76 288.1 223 62.8
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.1e-74 283.9 223 63.2
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.2e-73 280.4 222 62.2
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.6e-73 280.0 223 62.8
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.0e-72 277.3 223 62.3
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 8.5e-72 274.2 224 62.1
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.5e-71 273.5 224 59.8
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 5.5e-71 271.6 223 60.1
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 7.2e-71 271.2 194 66.5
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.2e-70 270.4 223 59.2
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.2e-70 270.4 223 59.2
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.2e-70 270.4 223 59.6
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 1.0e-69 267.3 222 58.6
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 8.8e-69 264.2 224 60.3
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 1.2e-68 263.8 181 69.1
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.5e-68 263.5 222 56.3
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.5e-68 263.5 223 58.7
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.5e-68 263.5 222 57.7
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.4e-68 262.3 223 58.3
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.7e-68 261.5 224 59.4
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 7.5e-68 261.2 201 61.7
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 3.7e-67 258.8 223 57.8
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 4.8e-67 258.5 225 57.8
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 4.8e-67 258.5 228 59.6
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 6.3e-67 258.1 222 57.7
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 1.1e-66 257.3 229 56.8
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.1e-66 255.4 223 57.0
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 9.1e-66 254.2 223 58.3
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 9.1e-66 254.2 223 58.7
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 9.1e-66 254.2 224 57.6
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.6e-65 253.4 223 58.3
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.0e-65 253.1 223 57.4
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 2.7e-65 252.7 223 57.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 3.5e-65 252.3 223 57.0
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 4.5e-65 251.9 223 55.2
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.3e-64 250.4 173 67.6
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.7e-64 250.0 229 55.9
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 3.8e-64 248.8 197 63.5
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 5.0e-64 248.4 255 52.9
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 6.5e-64 248.1 223 56.1
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 6.5e-64 248.1 206 57.8
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 6.5e-64 248.1 223 56.1
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 8.5e-64 247.7 224 54.5
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.5e-63 246.9 223 56.1
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.5e-63 246.9 222 59.0
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 2.5e-63 246.1 213 57.7
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 4.2e-63 245.4 223 56.5
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 5.5e-63 245.0 222 55.4
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.6e-62 243.4 223 55.2
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.7e-62 242.7 168 68.5
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 4.7e-62 241.9 223 54.3
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 6.1e-62 241.5 158 67.7
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.4e-61 240.4 158 69.0
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.4e-61 240.4 186 62.9
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.8e-61 240.0 158 70.9
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 2.3e-61 239.6 158 69.6
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 2.3e-61 239.6 223 55.2
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 3.0e-61 239.2 158 69.0
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 4.0e-61 238.8 225 56.4
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 6.8e-61 238.0 226 55.3
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 6.8e-61 238.0 210 58.6
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.2e-60 237.3 223 53.4
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 2.8e-59 232.6 222 54.1
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 2.8e-59 232.6 223 54.3
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 8.3e-59 231.1 222 53.2
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.1e-58 230.7 224 53.1
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 1.1e-58 230.7 158 67.7
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 1.8e-58 229.9 222 53.2
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 3.1e-58 229.2 143 73.4
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 4.1e-58 228.8 158 67.1
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 7.0e-58 228.0 157 66.2
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.2e-57 227.3 222 52.3
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 3.5e-57 225.7 222 52.3
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 4.5e-57 225.3 223 52.0
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 5.9e-57 224.9 222 51.4
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 5.9e-57 224.9 224 52.2
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.3e-56 223.8 223 49.8
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 2.3e-56 223.0 159 63.5
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.3e-56 223.0 159 63.5
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.3e-56 223.0 159 63.5
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.9e-56 222.6 222 52.3
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 3.8e-56 222.2 161 65.8
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 8.6e-56 221.1 208 54.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 2.5e-55 219.5 141 71.6
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 5.6e-55 218.4 223 50.7
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 9.5e-55 217.6 204 54.4
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 8.9e-53 211.1 148 66.9
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 4.4e-52 208.8 203 50.7
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.9e-51 206.1 225 45.8
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.6e-49 198.7 157 60.5
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 2.4e-42 176.4 158 53.2
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.2e-42 176.0 134 56.7
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 3.3e-39 166.0 161 53.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.6e-38 163.7 148 51.4
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 3.1e-37 159.5 140 48.6
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 2.9e-35 152.9 152 47.4
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 6.4e-35 151.8 181 42.0
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 1.9e-31 140.2 145 46.2
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 5.2e-29 132.1 154 50.0
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.1e-26 124.4 80 68.8
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.1e-26 122.5 145 48.3
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 7.1e-26 121.7 144 39.6
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 5.8e-20 102.1 52 78.8
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 9.3e-18 94.7 147 36.7
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.9e-15 87.0 54 75.9
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.3e-11 74.3 44 70.5
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 2.7e-09 66.6 74 45.9


User provided reference genes

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