Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 0.0e+00 1134.4 596 100.0
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 8.8e-132 474.9 652 47.5
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.1e-129 466.5 649 47.6
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 4.0e-124 449.5 627 46.3
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 2.6e-123 446.8 653 44.4
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.2e-120 438.0 659 44.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.3e-118 429.5 652 44.3
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 9.5e-118 428.3 652 44.2
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.8e-116 424.1 652 43.9
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 3.1e-116 423.3 652 44.9
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 2.0e-115 420.6 701 40.9
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 3.4e-115 419.9 642 43.9
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.3e-114 417.9 695 40.6
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.7e-114 417.5 678 43.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.6e-112 411.0 646 43.7
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.5e-112 409.8 702 41.2
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 6.0e-112 409.1 644 43.6
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.3e-111 407.9 658 43.5
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.5e-110 403.7 700 39.4
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 4.0e-108 396.4 702 39.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 8.9e-108 395.2 701 41.1
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 8.9e-108 395.2 651 42.1
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 2.0e-107 394.0 621 44.3
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 4.4e-107 392.9 687 39.4
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 6.4e-106 389.0 639 43.8
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.1e-105 388.3 625 43.5
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 5.4e-105 386.0 637 42.4
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 9.2e-105 385.2 706 40.4
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.7e-103 380.9 711 39.7
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.7e-103 380.9 647 41.7
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 2.8e-101 373.6 699 39.5
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 4.4e-99 366.3 676 38.2
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.3e-98 364.8 614 42.0
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 6.4e-98 362.5 709 38.6
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.1e-97 361.7 704 38.9
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 6.6e-95 352.4 670 39.1
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 8.6e-95 352.1 666 39.8
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.5e-94 351.3 596 40.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.5e-94 350.5 611 40.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 2.5e-94 350.5 619 41.4
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 7.3e-94 349.0 624 40.5
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 9.6e-94 348.6 613 43.6
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.6e-93 346.7 656 40.2
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.7e-93 346.3 654 38.2
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 7.6e-91 339.0 633 39.3
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.3e-90 338.2 661 36.9
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.4e-89 334.7 645 38.6
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.9e-89 334.3 609 41.1
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 9.3e-89 332.0 614 40.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.2e-88 331.6 628 37.7
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.2e-88 331.6 614 39.7
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.0e-87 328.6 626 39.5
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 2.5e-86 323.9 705 36.3
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 3.3e-86 323.6 640 36.2
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.6e-86 322.8 611 39.3
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 9.6e-86 322.0 633 38.4
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 6.2e-85 319.3 593 41.3
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 6.9e-84 315.8 708 35.3
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.2e-82 310.8 608 37.3
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 8.4e-82 308.9 639 36.5
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 1.2e-80 305.1 494 43.1
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 2.1e-77 294.3 641 35.4
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.8e-77 293.9 629 35.8
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.4e-76 291.6 631 37.1
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.9e-76 289.3 555 38.7
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.2e-75 288.5 633 34.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.2e-75 288.5 613 36.5
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 2.6e-75 287.3 587 36.8
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.7e-74 284.6 567 37.6
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 3.8e-74 283.5 621 37.2
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 2.4e-73 280.8 600 36.7
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 8.7e-71 272.3 633 35.2
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 8.7e-71 272.3 607 35.7
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.1e-69 267.7 541 38.8
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 4.8e-69 266.5 601 37.4
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.1e-68 265.4 618 35.4
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 2.4e-68 264.2 618 35.3
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 4.0e-68 263.5 630 35.2
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 4.0e-68 263.5 630 35.2
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.2e-67 261.9 623 35.2
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.5e-67 261.5 564 37.6
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 7.6e-67 259.2 312 50.3
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 3.8e-66 256.9 702 32.3
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.4e-66 255.8 686 32.8
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 7.9e-64 249.2 590 37.8
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.3e-63 247.7 601 37.6
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.0e-63 247.3 408 40.7
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 3.9e-63 246.9 537 36.7
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 3.3e-62 243.8 655 33.9
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 4.3e-62 243.4 605 35.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.6e-61 241.5 608 36.0
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.9e-57 228.0 633 32.2
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 5.5e-57 226.5 579 34.4
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 5.5e-57 226.5 595 34.3
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.6e-56 224.9 598 33.4
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.3e-55 221.9 593 35.1
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 3.3e-54 217.2 643 33.6
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 5.7e-54 216.5 224 54.0
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 2.4e-52 211.1 468 36.3
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 6.9e-52 209.5 319 42.0
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.5e-51 208.4 208 55.8
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.0e-50 205.7 478 36.2
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 9.4e-49 199.1 196 57.7
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.6e-48 198.4 336 43.2
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.3e-45 188.7 580 32.1
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 5.3e-44 183.3 302 43.4
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 4.7e-40 170.2 503 34.0
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.3e-39 167.9 191 51.8
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 5.7e-38 163.3 129 64.3
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 5.3e-36 156.8 408 34.8
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.6e-35 154.5 670 29.3
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.7e-34 151.8 140 57.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 9.4e-33 146.0 313 35.8
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 4.2e-25 120.6 193 39.9
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 1.4e-20 105.5 309 31.1
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 2.4e-20 104.8 177 40.1
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-19 102.4 201 40.8
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 2.0e-19 101.7 302 32.5
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 3.5e-19 100.9 81 55.6
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 1.3e-18 99.0 230 35.2
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 2.7e-16 91.3 304 29.9
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 4.0e-15 87.4 115 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.9e-10 71.2 658 22.6
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.5e-09 68.9 100 37.0
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 1.0e-07 62.8 199 27.1
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-07 59.7 67 49.3
SMO351G0024 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 8.9e-07 59.7 57 54.4


User provided reference genes

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