Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 8.1e-244 847.0 563 100.0
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.1e-152 544.3 555 66.7
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 2.1e-151 540.0 566 64.0
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.4e-150 537.3 554 66.2
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 3.1e-150 536.2 598 65.4
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 4.4e-149 532.3 569 62.6
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 4.9e-148 528.9 566 61.8
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 3.2e-147 526.2 584 62.3
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 3.5e-146 522.7 560 63.6
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 3.5e-146 522.7 539 63.8
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 2.8e-143 513.1 564 62.8
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 4.7e-143 512.3 556 63.1
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 1.4e-142 510.8 543 68.0
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 2.6e-141 506.5 567 61.0
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 3.4e-141 506.1 559 61.7
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.4e-141 506.1 566 60.4
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 5.8e-141 505.4 572 63.8
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 2.4e-139 500.0 562 60.3
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 7.1e-139 498.4 579 66.1
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 9.2e-139 498.0 562 52.8
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.0e-137 494.6 559 63.0
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 3.0e-137 493.0 599 61.3
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 5.1e-137 492.3 567 58.2
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 1.1e-136 491.1 566 59.7
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 4.3e-136 489.2 548 62.2
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 4.3e-136 489.2 556 62.8
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 4.3e-136 489.2 556 62.8
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.3e-136 489.2 542 63.1
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 2.1e-135 486.9 558 62.4
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 6.2e-135 485.3 563 60.0
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 5.2e-134 482.3 582 63.2
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.5e-133 480.7 558 66.5
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 2.6e-133 479.9 574 63.2
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 4.4e-133 479.2 590 61.9
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 5.8e-133 478.8 547 57.8
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 7.6e-133 478.4 558 61.3
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 7.6e-133 478.4 548 58.8
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 2.9e-132 476.5 564 59.0
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 6.4e-132 475.3 569 59.2
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 1.9e-131 473.8 566 58.5
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 3.2e-131 473.0 562 62.1
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 3.2e-131 473.0 604 60.4
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 1.2e-130 471.1 558 59.0
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 1.7e-129 467.2 550 58.9
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 2.3e-129 466.8 552 58.5
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 3.0e-129 466.5 557 51.2
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.5e-128 464.2 563 58.3
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 1.5e-128 464.2 594 54.2
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.5e-128 463.4 552 59.8
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 3.3e-128 463.0 555 56.2
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 3.3e-128 463.0 576 59.4
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 5.6e-128 462.2 613 55.8
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 7.3e-128 461.8 551 56.4
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 9.6e-128 461.5 551 58.1
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.2e-127 461.1 569 58.3
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.2e-127 461.1 559 61.4
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 1.6e-127 460.7 551 56.4
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 2.1e-127 460.3 564 57.8
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 2.8e-127 459.9 557 60.5
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 6.2e-127 458.8 570 56.8
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 8.1e-127 458.4 561 61.1
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 1.1e-126 458.0 556 59.4
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 1.8e-126 457.2 551 60.4
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 3.1e-126 456.4 561 57.2
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 6.8e-126 455.3 552 65.2
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 2.0e-125 453.8 558 60.4
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 2.6e-125 453.4 559 60.3
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 4.4e-125 452.6 552 53.4
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 2.2e-124 450.3 551 57.0
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 2.2e-124 450.3 565 56.1
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 2.9e-124 449.9 560 57.5
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 8.4e-124 448.4 618 58.9
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 1.9e-123 447.2 585 58.3
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 4.2e-123 446.0 564 55.3
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 4.2e-123 446.0 543 59.3
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 9.3e-123 444.9 551 56.6
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 1.2e-122 444.5 551 61.9
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 2.1e-122 443.7 569 59.2
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 2.1e-122 443.7 538 52.6
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 2.7e-122 443.4 550 58.0
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 8.7e-121 438.3 557 57.5
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.5e-120 437.6 557 57.1
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.9e-120 437.2 559 57.6
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 4.3e-120 436.0 551 57.9
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 6.2e-119 432.2 557 55.8
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 1.8e-118 430.6 550 57.5
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 1.2e-117 427.9 541 51.9
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 2.6e-117 426.8 562 52.0
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 5.8e-117 425.6 598 54.3
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 1.7e-116 424.1 543 53.4
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 2.2e-116 423.7 582 60.5
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 2.2e-116 423.7 557 56.9
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.9e-116 423.3 557 55.1
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 1.1e-115 421.4 574 52.6
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 1.1e-115 421.4 569 58.0
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.4e-115 421.0 556 59.0
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 2.4e-115 420.2 584 57.0
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 6.6e-113 412.1 577 61.5
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 5.6e-112 409.1 530 50.4
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 4.8e-111 406.0 549 53.4
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 6.2e-111 405.6 552 46.9
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 2.4e-107 393.7 541 48.1
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 5.4e-107 392.5 492 56.7
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 2.3e-105 387.1 548 54.6
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.9e-104 384.0 553 54.4
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 1.3e-103 381.3 579 45.3
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 1.0e-100 371.7 531 52.5
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 2.5e-88 330.5 598 52.5
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 2.5e-88 330.5 253 72.3
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 4.2e-83 313.2 531 39.5
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 5.5e-83 312.8 382 55.5
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 3.6e-82 310.1 213 97.7
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 1.1e-80 305.1 535 50.1
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 4.3e-80 303.1 528 46.0
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 1.5e-77 294.7 505 46.1
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.8e-76 290.0 505 45.0
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 9.4e-75 285.4 560 45.2
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 1.2e-69 268.5 578 35.3
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 4.2e-67 260.0 388 49.7
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 9.1e-62 242.3 161 77.6
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 3.0e-57 227.3 183 65.0
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 6.8e-57 226.1 247 54.3
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 2.2e-52 211.1 359 48.2
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 9.4e-51 205.7 126 84.9
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 1.4e-49 201.8 245 49.8
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 6.8e-49 199.5 243 46.9
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 3.7e-47 193.7 240 51.2
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 2.8e-42 177.6 188 52.7
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 2.8e-42 177.6 188 52.7
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 6.8e-41 172.9 387 46.8
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 1.5e-35 155.2 242 39.7
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.7e-29 134.4 100 71.0
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 3.6e-26 124.0 154 51.9
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 2.6e-24 117.9 135 48.9
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.4e-22 112.1 103 58.3
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 1.1e-19 102.4 251 33.1
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.3e-19 100.5 62 80.6
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 7.6e-16 89.7 83 57.8
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 9.9e-16 89.4 77 58.4
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 6.4e-15 86.7 74 67.6
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 1.4e-14 85.5 62 69.4
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.2e-13 82.4 47 87.2
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 6.6e-12 76.6 67 58.2
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 1.6e-10 72.0 67 61.2
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 2.1e-10 71.6 102 43.1
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 2.1e-10 71.6 69 55.1
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.6e-08 64.7 37 81.1
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 8.4e-07 59.7 67 53.7
Medtr0130s0060 Medicago truncatula HOM05D003167 ORTHO05D003929 5.4e-06 57.0 34 88.2


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