Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 1.5e-214 749.2 374 100.0
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 5.3e-151 538.1 355 72.7
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 9.1e-151 537.3 367 73.0
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.6e-147 526.6 354 72.3
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 6.1e-147 524.6 343 74.1
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 1.4e-146 523.5 354 72.0
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 5.2e-146 521.5 354 72.3
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.3e-144 516.9 344 73.0
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 1.8e-143 513.1 330 76.1
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 2.4e-143 512.7 371 70.1
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 2.4e-143 512.7 350 71.7
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 4.1e-143 511.9 350 71.7
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.6e-142 510.0 353 71.7
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 2.0e-142 509.6 343 71.7
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 5.9e-142 508.1 327 74.3
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 1.7e-141 506.5 370 70.3
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 5.0e-141 505.0 329 71.7
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.1e-140 503.8 333 73.0
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 1.1e-140 503.8 332 74.4
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 1.1e-140 503.8 351 70.4
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.5e-140 503.4 353 70.5
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 1.9e-140 503.1 325 76.0
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 3.2e-140 502.3 328 73.5
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 9.4e-140 500.7 339 72.3
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.2e-139 500.4 339 71.4
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.1e-139 499.6 339 72.0
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 4.7e-139 498.4 337 71.8
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 6.1e-139 498.0 333 71.2
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 1.0e-138 497.3 366 67.5
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 1.4e-138 496.9 355 68.5
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 2.3e-138 496.1 327 72.8
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 2.3e-138 496.1 330 71.2
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 4.0e-138 495.4 343 71.1
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 5.2e-138 495.0 337 70.9
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 8.8e-138 494.2 322 73.6
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.2e-137 493.8 344 71.2
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 2.0e-137 493.0 343 70.6
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 4.4e-137 491.9 343 70.8
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 1.3e-136 490.3 344 70.1
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 1.7e-136 490.0 345 70.7
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.1e-135 487.3 357 67.5
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 5.4e-135 485.0 343 69.4
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 5.9e-134 481.5 325 72.0
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 2.5e-132 476.1 321 72.0
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 9.5e-132 474.2 331 68.0
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 1.6e-131 473.4 335 66.9
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 4.7e-131 471.9 354 65.3
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 2.3e-130 469.5 328 67.7
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 5.2e-130 468.4 331 67.7
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 1.2e-129 467.2 354 65.8
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 2.0e-129 466.5 339 66.1
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.0e-129 466.5 328 67.7
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 4.4e-129 465.3 330 67.9
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 4.4e-129 465.3 329 68.1
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 9.8e-129 464.2 341 66.6
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 1.3e-128 463.8 341 66.9
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 2.2e-128 463.0 336 67.6
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 3.7e-128 462.2 336 67.3
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 4.9e-128 461.8 354 65.3
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.4e-127 460.3 328 68.3
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.4e-127 460.3 336 67.0
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 1.4e-127 460.3 391 60.4
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 1.4e-127 460.3 362 65.2
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 3.1e-127 459.1 329 66.0
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 3.1e-127 459.1 361 64.5
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 2.7e-126 456.1 372 64.0
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 1.7e-125 453.4 343 65.0
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.5e-124 450.3 368 62.2
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 7.3e-124 448.0 343 65.6
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 9.5e-124 447.6 320 68.8
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 3.6e-123 445.7 309 68.9
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 4.7e-123 445.3 333 65.5
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 4.7e-123 445.3 333 65.2
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 4.7e-123 445.3 331 66.2
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 8.0e-123 444.5 318 66.7
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 8.0e-123 444.5 341 65.1
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.4e-122 443.7 357 60.5
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 5.2e-122 441.8 356 60.7
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 6.8e-122 441.4 316 67.1
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 6.4e-120 434.9 370 59.5
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 6.4e-120 434.9 331 65.9
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 8.3e-120 434.5 321 66.4
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 1.9e-119 433.3 367 62.1
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 2.4e-119 433.0 331 61.0
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 4.1e-119 432.2 320 66.9
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 1.0e-117 427.6 335 63.3
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.0e-117 427.6 324 65.1
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 1.2e-115 420.6 293 71.0
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 3.6e-115 419.1 332 63.3
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 3.6e-115 419.1 569 44.5
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 1.4e-114 417.2 345 58.0
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 2.3e-114 416.4 337 59.1
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 2.3e-114 416.4 317 63.7
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 4.0e-114 415.6 353 58.6
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 6.8e-114 414.8 323 64.4
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 2.6e-113 412.9 370 56.8
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 3.7e-112 409.1 315 63.2
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 4.9e-112 408.7 271 69.4
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 4.6e-110 402.1 332 63.3
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 7.8e-110 401.4 291 68.0
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 7.8e-110 401.4 291 68.0
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 4.3e-108 395.6 291 65.6
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 4.0e-106 389.0 340 59.4
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 2.0e-105 386.7 264 72.7
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 9.9e-105 384.4 238 72.7
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 1.3e-104 384.0 291 62.9
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.0e-101 374.4 375 52.8
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 1.3e-101 374.0 326 59.2
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 1.7e-101 373.6 365 52.6
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 2.8e-99 366.3 268 66.8
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 2.4e-98 363.2 326 55.8
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 6.8e-98 361.7 269 62.8
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 6.8e-98 361.7 383 52.5
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 6.4e-96 355.1 267 67.0
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 8.4e-96 354.8 343 54.5
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 4.2e-95 352.4 295 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 1.2e-91 340.9 292 56.5
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 5.3e-90 335.5 199 80.9
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 4.4e-89 332.4 352 48.0
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 5.4e-87 325.5 204 74.5
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 8.1e-83 311.6 255 56.1
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 9.0e-82 308.1 324 47.2
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 2.2e-80 303.5 176 81.2
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 2.1e-75 287.0 361 46.3
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.9e-72 276.6 203 67.5
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 2.1e-70 270.4 194 66.0
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.3e-69 267.7 289 45.3
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.8e-67 260.0 305 49.2
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 8.2e-67 258.5 245 52.2
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 9.4e-55 218.4 285 40.7
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 1.6e-54 217.6 256 43.8
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.7e-54 216.9 137 73.0
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 1.8e-53 214.2 224 51.3
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.2e-51 207.2 158 63.3
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.9e-49 199.1 160 58.1
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 4.7e-46 189.5 286 36.4
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 2.6e-44 183.7 207 45.9
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 3.3e-44 183.3 209 45.9
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.4e-42 177.2 131 66.4
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 6.1e-38 162.5 313 36.1
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 3.0e-37 160.2 174 47.7
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 6.3e-35 152.5 81 87.7
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 1.2e-30 138.3 159 47.2
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 6.5e-24 115.9 180 38.9
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 8.5e-24 115.5 118 50.0
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 2.2e-19 100.9 90 62.2
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 2.2e-19 100.9 90 62.2
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 1.4e-18 98.2 269 27.1
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 5.9e-17 92.8 57 77.2
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 3.8e-16 90.1 48 85.4
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.1e-14 84.3 113 41.6
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 2.8e-14 84.0 71 56.3
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 2.0e-09 67.8 56 53.6
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.6e-06 57.0 27 88.9


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