Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 3.0e-134 482.3 327 100.0
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 7.4e-48 195.3 333 48.9
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 5.3e-46 189.1 329 49.8
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 7.2e-43 178.7 326 49.1
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 7.2e-43 178.7 315 43.2
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 7.4e-40 168.7 326 47.9
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 7.4e-40 168.7 324 50.3
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 7.4e-40 168.7 315 46.7
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 1.3e-39 167.9 332 39.5
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 3.7e-39 166.4 315 37.8
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 7.7e-37 158.7 326 46.6
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 8.5e-36 155.2 315 37.1
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 1.1e-35 154.8 327 40.1
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.5e-35 153.7 328 44.2
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.2e-35 153.3 315 44.1
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 1.0e-33 148.3 321 38.3
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 4.0e-33 146.4 246 52.4
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 5.2e-33 146.0 322 39.8
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.2e-33 146.0 326 43.6
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.5e-32 144.4 343 36.4
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 3.3e-32 143.3 331 43.8
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 4.4e-32 142.9 330 46.1
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.7e-32 142.5 350 35.4
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.7e-32 142.5 350 35.4
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.7e-32 142.5 328 42.4
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 6.3e-31 139.0 365 43.0
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 5.3e-30 136.0 248 50.8
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 1.0e-28 131.7 311 42.4
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.2e-28 130.6 334 32.6
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 1.5e-27 127.9 295 44.7
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 5.5e-27 125.9 334 32.0
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 5.5e-27 125.9 329 42.2
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 9.4e-27 125.2 302 41.4
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 1.6e-26 124.4 320 41.9
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.8e-25 120.9 319 40.8
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 3.0e-25 120.2 301 36.2
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 2.0e-24 117.5 326 42.0
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 3.4e-24 116.7 342 31.6
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 3.7e-23 113.2 305 39.7
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 4.1e-22 109.8 315 42.9
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 4.1e-22 109.8 324 39.5
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 2.0e-21 107.5 303 38.9
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.0e-21 107.5 305 38.7
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 2.7e-21 107.1 146 49.3
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 5.9e-21 105.9 320 37.5
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 7.7e-21 105.5 198 53.0
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.0e-20 105.1 201 35.3
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 2.2e-20 104.0 323 36.5
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.2e-20 104.0 325 31.4
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 3.8e-20 103.2 319 39.2
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 8.5e-20 102.1 334 39.5
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 2.5e-19 100.5 324 39.8
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.2e-18 98.2 152 42.1
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 1.6e-18 97.8 324 41.0
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.4e-17 94.7 201 32.8
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 2.0e-16 90.9 303 37.3
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.6e-16 90.5 146 43.8
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 7.5e-16 89.0 300 38.3
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 9.8e-16 88.6 175 45.7
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 1.3e-15 88.2 138 47.1
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.7e-15 87.8 335 31.6
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 2.2e-15 87.4 228 39.9
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 2.2e-15 87.4 227 30.0
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.8e-15 87.0 165 54.5
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 4.9e-15 86.3 229 29.3
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 4.9e-15 86.3 175 45.7
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 4.9e-15 86.3 140 42.9
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 1.1e-14 85.1 248 41.5
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 1.4e-14 84.7 227 29.5
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.4e-14 84.7 238 35.7
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.4e-14 84.7 175 44.6
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 2.4e-14 84.0 344 30.2
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 4.1e-14 83.2 118 41.5
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 7.0e-14 82.4 292 35.3
Sabra02G0048700 Salix brachista HOM05D006785 ORTHO05D006259 3.5e-13 80.1 317 37.9
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 1.0e-12 78.6 184 42.9
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.3e-12 78.2 271 31.0
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.8e-12 76.6 142 38.7
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.0e-12 76.3 144 38.9
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 6.6e-12 75.9 320 37.2
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 5.6e-11 72.8 325 31.4
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 7.2e-11 72.4 159 34.6
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 7.2e-11 72.4 134 37.3
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 2.8e-10 70.5 147 41.5
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 3.6e-10 70.1 125 38.4
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 4.7e-10 69.7 134 36.6
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 6.1e-10 69.3 142 35.9
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 8.0e-10 68.9 347 26.8
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 2.3e-09 67.4 234 39.7
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 2.3e-09 67.4 97 42.3
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 5.2e-09 66.2 309 36.2
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 5.2e-09 66.2 310 34.8
Duzib187G1417 Durio zibethinus HOM05D006785 ORTHO05D006259 3.4e-08 63.5 129 41.1
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 4.4e-08 63.2 325 31.1
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 4.4e-08 63.2 237 36.3
BolC5t29251H Brassica oleracea HOM05D006785 ORTHO05D006259 9.8e-08 62.0 100 37.0
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 1.3e-07 61.6 130 38.5
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 1.7e-07 61.2 332 26.5
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 4.9e-07 59.7 332 26.8
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 6.4e-07 59.3 101 35.6
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 8.3e-07 58.9 119 39.5
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 8.3e-07 58.9 325 27.4
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 1.1e-06 58.5 142 31.7
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 1.8e-06 57.8 335 25.4
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.8e-06 57.8 361 28.5
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 3.2e-06 57.0 330 27.9


User provided reference genes

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