Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 6.7e-294 1013.4 575 100.0
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.3e-192 675.2 568 64.4
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 9.7e-160 567.8 583 54.0
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.8e-158 563.5 565 55.4
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 1.2e-157 560.8 553 55.5
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 2.6e-157 559.7 566 54.8
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 9.4e-155 551.2 576 52.4
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 1.2e-154 550.8 575 51.5
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 6.7e-153 545.0 565 53.6
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.1e-150 537.7 589 52.1
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.5e-149 533.9 558 54.1
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 7.2e-147 525.0 576 51.7
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.2e-146 524.2 570 53.9
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.8e-145 520.4 574 51.7
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.0e-144 516.9 572 51.0
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 2.6e-144 516.5 577 52.0
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 9.7e-144 514.6 566 53.5
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.8e-143 513.1 567 51.1
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-142 511.1 566 52.5
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 7.0e-142 508.4 573 52.4
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 3.5e-141 506.1 573 51.1
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.5e-141 506.1 566 50.4
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.7e-140 503.8 568 51.2
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.5e-139 500.7 632 48.4
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 6.1e-138 495.4 578 49.8
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 6.1e-138 495.4 555 49.9
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.5e-136 490.7 545 49.0
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 6.3e-135 485.3 576 51.4
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.1e-134 484.6 576 51.0
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 1.4e-134 484.2 570 48.1
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.8e-134 483.8 569 51.1
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 9.1e-134 481.5 579 48.4
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 2.0e-133 480.3 598 47.2
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 2.7e-133 479.9 571 48.3
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.5e-133 479.6 569 48.2
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 3.5e-133 479.6 559 47.4
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 7.7e-133 478.4 578 51.7
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 1.0e-132 478.0 558 51.3
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 2.9e-132 476.5 568 48.2
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 2.9e-132 476.5 557 50.1
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 5.0e-132 475.7 565 51.0
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.5e-131 474.2 558 50.2
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 1.9e-131 473.8 539 49.0
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 3.2e-131 473.0 579 47.5
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 8.0e-130 468.4 552 48.6
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 1.0e-129 468.0 540 49.3
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.8e-129 467.2 551 49.9
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.2e-129 465.7 551 49.5
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 6.8e-129 465.3 551 49.5
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 8.8e-129 464.9 536 48.5
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 2.0e-128 463.8 564 45.7
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.4e-128 463.0 574 46.3
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 9.8e-128 461.5 554 46.6
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.8e-127 459.9 571 45.5
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.8e-127 459.9 571 45.5
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 5.4e-126 455.7 575 46.6
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 3.5e-125 453.0 574 45.3
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 7.7e-125 451.8 550 46.7
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 3.8e-124 449.5 536 46.6
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 3.8e-124 449.5 549 47.5
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 5.0e-124 449.1 574 46.0
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 5.0e-124 449.1 524 46.9
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.5e-123 446.8 456 59.0
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 3.2e-123 446.4 467 51.0
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 4.2e-123 446.0 549 47.2
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.8e-121 440.7 555 47.6
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 5.2e-121 439.1 564 45.6
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.5e-120 437.6 550 49.1
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.5e-120 437.6 531 45.2
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.0e-120 437.2 572 46.9
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 1.7e-119 434.1 585 44.6
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 2.8e-119 433.3 542 45.8
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 3.7e-119 433.0 581 47.3
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.8e-118 430.6 552 44.7
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 3.1e-118 429.9 539 45.3
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 4.1e-118 429.5 577 45.9
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 9.2e-118 428.3 565 46.5
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 9.2e-118 428.3 547 45.0
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 3.5e-117 426.4 542 45.9
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.9e-116 423.3 583 45.1
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 8.6e-116 421.8 540 43.5
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 4.3e-115 419.5 541 45.5
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 9.5e-115 418.3 564 43.8
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.6e-114 417.5 456 55.3
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.8e-113 414.1 424 52.1
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 3.0e-113 413.3 546 44.1
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 4.9e-111 406.0 548 44.3
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 8.3e-111 405.2 532 43.8
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 1.4e-110 404.4 541 44.9
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 2.0e-109 400.6 569 42.2
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 7.8e-109 398.7 554 45.5
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 3.0e-108 396.7 554 45.1
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 3.9e-108 396.4 553 43.2
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 6.6e-108 395.6 553 43.2
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 1.1e-107 394.8 548 42.5
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.3e-107 392.9 547 45.9
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 4.3e-107 392.9 552 43.5
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 2.8e-106 390.2 553 42.9
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 3.6e-106 389.8 554 44.4
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 3.1e-105 386.7 559 40.1
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 5.2e-105 386.0 553 42.9
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 8.9e-105 385.2 553 42.9
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 1.5e-104 384.4 544 42.1
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.4e-102 377.9 536 41.2
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 2.4e-102 377.1 544 42.5
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 5.4e-102 375.9 556 41.0
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 2.0e-101 374.0 552 40.6
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.5e-101 373.2 540 40.9
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.6e-101 372.9 391 53.2
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 4.6e-101 372.9 549 41.3
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 2.1e-98 364.0 505 44.8
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 2.8e-98 363.6 568 40.0
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 1.4e-97 361.3 584 41.8
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.6e-96 357.1 589 39.6
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 5.4e-94 349.4 539 39.7
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.0e-92 345.1 360 53.1
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.3e-92 344.7 445 46.5
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 5.6e-91 339.3 573 40.0
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 4.4e-88 329.7 457 43.8
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 9.9e-88 328.6 359 51.3
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 4.9e-87 326.2 425 44.9
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 4.1e-86 323.2 451 45.7
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 3.9e-84 316.6 566 37.3
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.8e-81 307.8 263 61.2
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 8.7e-76 288.9 266 56.8
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.1e-73 282.0 542 36.9
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 4.5e-72 276.6 535 34.8
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.4e-65 255.0 435 37.0
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 7.6e-64 249.2 411 36.7
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.2e-58 229.6 251 49.4
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.2e-53 215.3 239 51.0
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 4.6e-53 213.4 320 39.7
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.3e-44 185.3 243 45.7
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.9e-44 183.7 396 32.3
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 8.7e-44 182.6 537 26.4
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 4.8e-42 176.8 402 34.6
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 1.5e-40 171.8 435 29.0
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.8e-39 167.2 248 37.5
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 6.5e-39 166.4 511 28.2
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 5.1e-36 156.8 560 27.1
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.5e-35 155.2 553 27.5
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.2e-34 151.4 152 55.3
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.8e-34 150.2 152 55.3
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 1.9e-30 138.3 147 51.0
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 3.6e-29 134.0 154 48.1
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.0e-27 128.3 181 41.4
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 3.7e-26 124.0 159 39.0
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.2e-24 119.0 145 44.1
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.6e-24 118.6 145 42.8
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.3e-23 115.5 162 44.4
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.1e-21 108.2 530 23.6
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 4.7e-21 107.1 173 34.7
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.0e-20 105.9 128 40.6
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 4.0e-20 104.0 568 25.4
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.0e-20 104.0 172 39.0
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 5.2e-20 103.6 154 40.3
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 1.2e-19 102.4 109 52.3
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.6e-19 101.3 112 46.4
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.2e-18 98.2 80 65.0
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.3e-18 96.7 98 53.1
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 5.3e-17 93.6 162 37.0
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 1.0e-15 89.4 200 26.0
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 1.1e-14 85.9 132 34.1
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.5e-14 85.5 120 41.7
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.5e-14 84.7 112 48.2
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 9.4e-14 82.8 148 32.4
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.6e-13 82.0 73 57.5
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.0e-12 77.4 88 47.7
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 3.4e-11 74.3 81 39.5
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.5e-11 73.2 127 39.4
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.8e-09 68.6 111 36.0
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.1e-09 67.8 129 40.3
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 4.1e-09 67.4 68 52.9
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.2e-08 65.9 55 60.0
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.7e-07 62.0 64 50.0
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.7e-07 62.0 64 50.0
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.7e-07 62.0 68 50.0
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.1e-06 59.3 111 32.4
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 1.5e-06 58.9 83 33.7
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 9.5e-06 56.2 60 50.0


User provided reference genes

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