Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.9e-290 1001.1 489 100.0
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.0e-214 749.2 528 71.2
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 3.4e-214 748.4 537 70.8
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 6.4e-213 744.2 525 71.4
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.4e-212 743.0 537 70.4
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 3.2e-212 741.9 537 70.2
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 7.1e-212 740.7 537 70.8
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.6e-211 739.6 533 68.3
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 1.0e-210 736.9 544 69.9
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.5e-209 733.0 529 70.5
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 2.5e-209 732.3 536 68.8
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 4.3e-209 731.5 535 69.9
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.6e-208 729.6 528 70.1
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.8e-208 728.0 537 70.4
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 6.2e-208 727.6 532 69.9
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.5e-206 723.0 545 68.4
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.6e-206 722.2 535 68.8
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 5.8e-206 721.1 536 68.3
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 7.6e-206 720.7 538 68.4
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 8.4e-205 717.2 533 69.0
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.9e-204 716.1 561 65.4
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 3.5e-203 711.8 536 67.5
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 4.6e-203 711.4 528 68.0
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 7.3e-201 704.1 536 67.0
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 3.6e-200 701.8 620 61.1
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 6.9e-199 697.6 536 69.0
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 9.0e-199 697.2 537 66.1
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 7.1e-196 687.6 543 65.9
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 9.3e-196 687.2 537 65.7
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 9.3e-196 687.2 537 65.9
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.6e-195 686.4 514 67.7
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 4.6e-195 684.9 527 66.8
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.1e-193 680.2 523 65.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.9e-193 679.5 539 65.1
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.5e-193 679.1 545 64.6
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 3.3e-193 678.7 536 64.9
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 3.3e-193 678.7 525 66.7
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.3e-193 678.3 529 63.5
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.6e-192 676.4 530 66.6
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.8e-192 674.9 530 66.6
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.4e-191 673.3 503 67.0
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 1.8e-191 672.9 538 63.8
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.4e-191 672.5 527 66.4
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 3.1e-191 672.2 539 64.4
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 4.0e-191 671.8 538 65.6
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 9.0e-191 670.6 503 68.4
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.2e-190 670.2 544 64.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 2.0e-190 669.5 539 63.5
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.0e-190 669.5 530 66.0
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 2.6e-190 669.1 538 63.4
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 4.5e-190 668.3 538 63.2
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 5.8e-190 667.9 538 63.2
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 8.4e-189 664.1 539 63.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.9e-188 662.9 532 65.2
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.0e-187 657.9 527 65.1
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 7.9e-187 657.5 488 68.0
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 1.0e-186 657.1 526 65.4
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.3e-186 656.8 542 62.9
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.8e-186 656.4 545 63.3
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.8e-186 656.4 535 63.7
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 3.9e-186 655.2 546 62.1
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.9e-185 652.9 540 62.8
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 4.3e-185 651.7 533 63.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 2.1e-184 649.4 535 62.6
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.4e-183 646.7 547 60.0
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 5.8e-182 641.3 527 63.9
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 7.6e-182 641.0 560 60.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 2.2e-181 639.4 613 57.4
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.3e-176 623.6 522 60.9
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 8.2e-176 620.9 528 61.6
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.7e-173 613.2 598 55.2
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 5.0e-173 611.7 568 56.7
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 5.0e-173 611.7 568 56.7
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 5.0e-173 611.7 415 70.8
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 3.6e-171 605.5 534 61.4
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 2.0e-169 599.7 522 59.6
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 8.2e-168 594.3 522 58.6
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.4e-167 593.6 472 65.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 5.9e-166 588.2 486 60.5
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 7.2e-164 581.3 501 60.3
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.1e-159 565.8 432 67.8
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.1e-159 565.5 563 56.0
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.2e-157 559.7 588 54.1
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.5e-156 556.2 527 58.1
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 2.7e-155 552.7 417 66.4
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 4.5e-150 535.4 533 55.9
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.5e-148 530.4 492 58.3
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.8e-143 513.5 412 65.3
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.8e-143 513.5 541 49.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.5e-140 503.1 500 53.8
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.3e-138 496.5 354 69.5
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 6.8e-138 495.0 402 62.9
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 8.8e-138 494.6 466 56.7
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 6.0e-118 428.7 289 70.9
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.5e-116 424.1 309 68.0
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 8.9e-114 414.8 495 47.9
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.5e-113 411.8 336 65.8
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 4.3e-108 396.0 273 68.9
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.1e-102 377.1 296 63.9
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.6e-102 375.9 882 30.8
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 5.6e-100 369.0 245 71.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 6.8e-98 362.1 844 31.2
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.8e-98 362.1 360 55.3
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.2e-97 361.3 958 29.2
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 8.4e-96 355.1 970 29.0
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.2e-95 353.2 889 30.0
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.4e-89 333.2 278 63.7
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.1e-74 285.0 234 64.5
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.7e-69 265.8 263 55.1
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 6.3e-59 232.6 272 43.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 4.2e-55 219.9 196 62.2
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.3e-52 210.3 235 52.3
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.4e-45 188.3 172 59.3
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.0e-37 162.2 123 67.5
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 2.2e-24 117.9 80 76.2
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 1.0e-21 109.0 106 51.9
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 7.0e-18 96.3 68 69.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.5e-17 93.6 245 28.6
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.3e-16 91.3 108 48.1
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 5.6e-15 86.7 245 24.5
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.5e-12 78.6 154 33.1
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 6.4e-11 73.2 59 71.2
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 3.5e-09 67.4 333 23.4
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 4.3e-07 60.5 39 71.8


User provided reference genes

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