Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 1.6e-238 828.9 402 100.0
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 7.3e-122 441.4 423 55.1
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 8.1e-121 438.0 420 55.0
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 1.1e-120 437.6 396 56.3
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 6.8e-120 434.9 402 55.0
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 2.0e-119 433.3 422 54.5
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 1.7e-118 430.3 415 55.7
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 8.4e-118 427.9 405 55.6
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.4e-117 427.2 401 55.9
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.2e-117 426.0 407 55.0
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 4.1e-117 425.6 407 55.0
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.4e-117 425.2 401 55.1
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 9.2e-117 424.5 407 55.0
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 9.2e-117 424.5 480 49.0
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 1.6e-116 423.7 458 50.9
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.6e-116 422.2 407 54.5
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 4.6e-116 422.2 431 51.7
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 6.0e-116 421.8 401 55.1
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 6.6e-115 418.3 405 55.8
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 8.6e-115 417.9 408 52.7
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.1e-114 417.5 386 55.4
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.6e-114 415.2 392 53.3
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 7.3e-114 414.8 376 55.3
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 7.3e-114 414.8 410 54.1
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 1.1e-112 411.0 402 55.0
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.4e-112 409.8 415 52.5
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 4.0e-112 409.1 415 53.5
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 4.4e-111 405.6 391 56.0
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 5.8e-111 405.2 396 54.5
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 5.8e-111 405.2 437 49.9
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 6.4e-110 401.7 399 53.9
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 2.4e-109 399.8 374 53.5
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 2.4e-109 399.8 374 53.7
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 5.4e-109 398.7 401 52.4
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 5.4e-109 398.7 429 50.3
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 1.2e-108 397.5 444 50.9
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 2.1e-108 396.7 401 50.1
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 2.7e-108 396.4 386 54.9
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 6.0e-108 395.2 401 52.4
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 7.8e-108 394.8 411 50.9
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 7.8e-108 394.8 415 49.2
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 2.3e-107 393.3 390 52.8
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 3.9e-107 392.5 393 52.2
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 1.5e-106 390.6 394 50.5
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 3.3e-106 389.4 398 51.3
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 2.8e-105 386.3 411 50.9
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 4.0e-104 382.5 387 53.7
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 2.6e-103 379.8 400 51.0
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 3.4e-103 379.4 417 47.2
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 4.5e-103 379.0 411 49.1
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 5.8e-103 378.6 412 50.7
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 9.9e-103 377.9 499 45.3
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 2.9e-102 376.3 409 49.1
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 1.9e-101 373.6 403 50.1
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.4e-101 373.2 274 62.8
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 1.6e-100 370.5 402 50.5
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 1.6e-100 370.5 425 49.2
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 7.9e-100 368.2 400 49.5
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 2.3e-99 366.7 405 48.1
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 6.7e-99 365.2 402 49.5
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 8.7e-99 364.8 398 50.0
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 1.5e-98 364.0 403 49.4
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 1.9e-98 363.6 406 46.8
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 5.6e-98 362.1 403 48.1
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 9.6e-98 361.3 380 49.5
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.6e-97 360.5 407 48.6
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.1e-97 360.1 398 48.7
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 1.8e-96 357.1 410 49.0
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 2.4e-96 356.7 297 58.9
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 1.2e-95 354.4 391 48.6
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 2.0e-95 353.6 399 48.9
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 2.0e-95 353.6 399 48.6
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 4.5e-95 352.4 407 47.7
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 7.6e-95 351.7 273 61.9
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 2.2e-94 350.1 399 48.1
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 2.2e-94 350.1 287 59.9
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 3.8e-94 349.4 380 49.2
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 1.1e-93 347.8 400 47.8
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 1.1e-93 347.8 400 47.8
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 1.9e-93 347.1 384 48.2
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 2.4e-93 346.7 396 48.7
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 3.2e-93 346.3 399 48.1
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 3.2e-93 346.3 399 48.1
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 4.2e-93 345.9 302 56.6
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 1.6e-92 344.0 399 48.9
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 4.6e-92 342.4 302 56.3
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 4.6e-92 342.4 402 49.0
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 6.0e-92 342.0 386 50.5
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 2.3e-91 340.1 434 46.3
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 3.9e-91 339.3 381 49.6
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 4.3e-90 335.9 393 46.1
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 7.4e-90 335.1 392 46.7
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 3.7e-89 332.8 391 48.6
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 1.8e-88 330.5 361 47.4
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 2.0e-87 327.0 388 46.4
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 3.8e-86 322.8 408 45.1
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 6.5e-86 322.0 389 46.5
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 1.4e-85 320.9 397 44.8
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 4.2e-85 319.3 400 47.2
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 7.9e-84 315.1 433 42.0
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 5.1e-83 312.4 438 40.0
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 1.1e-82 311.2 392 45.9
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 9.6e-82 308.1 415 43.6
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 6.9e-80 302.0 426 42.7
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 2.0e-79 300.4 301 51.5
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 7.6e-79 298.5 278 55.0
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 8.5e-78 295.0 278 54.7
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 8.5e-78 295.0 278 54.7
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 1.6e-76 290.8 279 53.4
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 2.1e-76 290.4 279 53.4
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 1.8e-75 287.3 423 39.0
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.7e-70 270.8 257 55.3
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.4e-69 267.7 289 50.2
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 3.0e-67 260.0 328 46.3
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 8.2e-65 251.9 321 44.2
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.8e-64 250.8 276 47.5
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.4e-64 250.4 227 55.9
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 1.1e-61 241.5 249 50.2
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.9e-61 240.7 284 46.8
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 1.4e-56 224.6 170 64.7
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 2.9e-54 216.9 341 43.1
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 2.4e-48 197.2 298 38.6
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 1.2e-47 194.9 277 38.3
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 1.2e-47 194.9 188 51.1
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 2.2e-46 190.7 280 42.1
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 5.0e-46 189.5 279 39.4
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 2.3e-43 180.6 161 55.3
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 4.8e-41 172.9 123 65.9
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 1.1e-40 171.8 248 38.7
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 9.1e-40 168.7 248 42.3
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.0e-38 162.9 127 60.6
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 6.5e-38 162.5 126 61.1
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 6.3e-33 146.0 243 34.6
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 7.8e-31 139.0 111 55.9
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 2.3e-30 137.5 215 40.5
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.1e-29 135.2 215 39.5
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 3.6e-28 130.2 201 42.8
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 4.7e-28 129.8 218 38.5
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.0e-27 127.1 102 57.8
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 6.8e-27 125.9 189 42.3
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.1e-24 118.6 80 65.0
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 2.4e-24 117.5 115 48.7
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 7.3e-21 105.9 69 65.2
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 2.8e-20 104.0 283 27.9
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.4e-19 101.7 94 50.0
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 6.8e-19 99.4 58 72.4
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 6.8e-19 99.4 64 64.1
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 3.4e-18 97.1 181 33.7
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.4e-16 91.7 55 70.9
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.5e-15 87.0 79 50.6
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 7.8e-15 85.9 65 55.4
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.7e-14 84.7 96 47.9
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.8e-12 77.4 48 62.5
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.2e-10 72.0 53 62.3
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.5e-10 69.3 53 58.5
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.3e-06 57.8 50 50.0


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