Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.5e-133 479.6 241 100.0
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.1e-120 433.7 241 88.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 4.9e-113 411.4 240 82.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.8e-112 409.5 241 83.4
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.4e-112 409.1 241 81.7
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 3.1e-112 408.7 234 83.8
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.7e-111 405.6 241 81.7
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.7e-111 405.6 241 81.7
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.0e-110 403.7 241 81.7
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.7e-110 402.9 241 80.5
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.0e-110 401.4 235 81.7
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 6.6e-110 401.0 241 80.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.6e-110 401.0 241 81.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 8.6e-110 400.6 240 82.1
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-109 400.2 235 81.7
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.3e-109 398.3 235 81.7
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 4.3e-109 398.3 241 80.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 5.6e-109 397.9 241 78.8
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 7.3e-109 397.5 241 80.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 7.3e-109 397.5 241 80.1
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 9.5e-109 397.1 231 81.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 9.5e-109 397.1 241 79.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.2e-108 396.7 235 82.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.8e-108 395.6 253 76.7
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 2.8e-108 395.6 247 79.4
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 2.8e-108 395.6 241 79.3
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 3.6e-108 395.2 241 78.8
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.1e-108 394.4 237 79.3
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.8e-107 392.9 241 78.8
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.8e-107 392.9 241 78.0
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 3.0e-107 392.1 241 79.3
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 5.2e-107 391.3 241 78.8
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 8.9e-107 390.6 238 76.9
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 8.9e-107 390.6 241 77.6
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-106 390.2 235 78.7
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.5e-106 389.8 237 78.9
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 3.4e-106 388.7 235 78.3
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 4.4e-106 388.3 221 85.1
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 4.4e-106 388.3 241 78.8
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 76.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 78.4
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 76.3
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.9e-105 385.6 230 82.2
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 3.7e-105 385.2 241 75.9
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 3.7e-105 385.2 241 75.9
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 3.7e-105 385.2 223 81.6
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 8.3e-105 384.0 234 80.3
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.4e-104 383.3 234 78.6
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.8e-104 382.9 241 76.8
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.4e-104 382.5 241 76.3
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 76.3
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 75.9
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.2e-103 380.2 229 77.7
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 7.8e-103 377.5 241 75.1
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.7e-102 376.3 241 74.3
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.7e-102 376.3 264 71.2
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.3e-102 375.9 241 76.3
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 3.0e-102 375.6 254 74.0
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 74.7
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.0e-102 374.8 233 79.4
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 8.6e-102 374.0 236 79.7
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.5e-101 373.2 264 71.6
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.2e-100 370.2 233 78.1
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.7e-100 368.2 241 71.8
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.7e-100 368.2 241 71.8
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 8.0e-100 367.5 241 73.4
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.0e-99 367.1 241 71.8
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 4.0e-99 365.2 230 76.5
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 8.9e-99 364.0 233 74.7
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 8.9e-99 364.0 229 75.1
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 8.9e-99 364.0 229 76.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 8.9e-99 364.0 229 76.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.9e-97 358.2 241 74.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 8.3e-97 357.5 239 70.7
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 7.0e-96 354.4 242 69.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 9.2e-96 354.0 232 76.3
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 9.2e-96 354.0 238 69.7
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.2e-95 353.6 240 69.6
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.2e-95 353.6 231 73.2
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.2e-95 353.6 282 65.2
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.6e-95 353.2 228 73.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.5e-95 352.1 231 72.7
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.0e-94 350.5 209 81.8
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.6e-94 347.4 261 65.5
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 4.3e-93 345.1 210 80.5
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 8.1e-92 340.9 253 66.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 6.8e-91 337.8 236 71.6
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.6e-90 335.9 262 64.1
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.4e-88 330.1 241 67.2
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.6e-84 316.6 196 77.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.2e-82 310.5 226 64.2
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 7.6e-82 307.8 234 62.0
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 6.4e-81 304.7 236 67.4
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 8.4e-81 304.3 268 61.6
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 8.4e-81 304.3 211 70.1
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 3.2e-80 302.4 232 65.1
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 5.4e-80 301.6 196 78.1
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.6e-76 288.9 191 73.3
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 9.9e-74 280.8 177 79.1
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.4e-73 278.1 306 51.0
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 4.6e-71 271.9 238 54.2
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.5e-69 266.2 194 68.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 6.9e-67 258.1 226 54.0
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 7.6e-66 254.6 231 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.1e-64 250.8 225 53.8
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 9.3e-64 247.7 160 71.9
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 8.7e-62 241.1 186 66.1
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 8.7e-62 241.1 186 66.1
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.4e-59 233.8 192 63.5
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.8e-59 233.4 194 63.4
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.9e-57 226.1 223 49.8
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 4.2e-48 195.7 123 77.2
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.7e-41 173.7 128 65.6
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.1e-39 166.8 164 54.3
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 5.9e-34 148.7 122 64.8
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.7e-30 135.2 93 71.0
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 2.2e-28 130.2 92 70.7
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 4.1e-27 125.9 69 89.9
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 5.9e-26 122.1 84 70.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.2e-24 116.3 71 71.8
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 2.6e-21 106.7 55 83.6
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 5.7e-21 105.5 113 55.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 4.7e-15 85.9 69 65.2
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 4.0e-14 82.8 152 32.9
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.0e-09 68.2 65 53.8


User provided reference genes

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