Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3244 Punica granatum HOM05D001392 ORTHO05D336550 4.9e-35 150.6 76 100.0
PGR031G3606 Punica granatum HOM05D001392 ORTHO05D003370 3.8e-11 71.2 51 74.5
Eucgr.F04425 Eucalyptus grandis HOM05D001392 ORTHO05D003370 1.6e-09 65.9 51 66.7
Gohir.A08G018000 Gossypium hirsutum HOM05D001392 ORTHO05D003370 7.8e-09 63.5 51 64.7
Gohir.D08G028600 Gossypium hirsutum HOM05D001392 ORTHO05D003370 1.3e-08 62.8 51 64.7
Gorai.004G025700 Gossypium raimondii HOM05D001392 ORTHO05D003370 1.3e-08 62.8 51 64.7
Cpa.g.sc2.74 Carica papaya HOM05D001392 ORTHO05D003370 3.0e-08 61.6 51 60.8
Thecc.09G180600 Theobroma cacao HOM05D001392 ORTHO05D003370 3.9e-08 61.2 51 62.7
COL.COLO4_25471 Corchorus olitorius HOM05D001392 ORTHO05D003370 1.1e-07 59.7 51 60.8
COL.COLO4_31125 Corchorus olitorius HOM05D001392 ORTHO05D003370 1.1e-07 59.7 51 60.8
Eucgr.E01106 Eucalyptus grandis HOM05D001392 ORTHO05D003370 1.1e-07 59.7 51 62.7
THA.LOC104824111 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 1.1e-07 59.7 51 62.7
THA.LOC104805109 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 1.5e-07 59.3 51 62.7
Duzib170G0790 Durio zibethinus HOM05D001392 ORTHO05D003370 2.5e-07 58.5 51 60.8
Aa31LG1G460 Aethionema arabicum HOM05D001392 ORTHO05D003370 5.6e-07 57.4 51 56.9
GSVIVG01010632001 Vitis vinifera HOM05D001392 ORTHO05D003370 5.6e-07 57.4 50 62.0
BcaC05g25377 Brassica carinata HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
A06p10670 Brassica napus HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
C05p12580 Brassica napus HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
BolC5t30002H Brassica oleracea HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
BraA06t24247Z Brassica rapa HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
Sp1g12970 Schrenkiella parvula HOM05D001392 ORTHO05D003370 3.6e-06 54.7 51 56.9
Ah.03g134560 Amaranthus hybridus HOM05D001392 ORTHO05D003370 6.2e-06 53.9 50 56.0
Actinidia34544 Actinidia chinensis HOM05D001392 ORTHO05D003370 8.1e-06 53.5 50 56.0
BcaB02g06531 Brassica carinata HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 54.9
BcaC07g41556 Brassica carinata HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 56.9
A09p61990 Brassica napus HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 56.9
C08p45570 Brassica napus HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 56.9
BraA09t41562Z Brassica rapa HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 56.9
Carub.0001s1437 Capsella rubella HOM05D001392 ORTHO05D003370 8.1e-06 53.5 51 56.9
Sc07g0001630 Simmondsia chinensis HOM05D001392 ORTHO05D003370 8.1e-06 53.5 50 54.0


User provided reference genes

Program Settings