Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.6e-65 252.7 136 100.0
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.9e-61 239.2 136 94.9
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 4.1e-61 238.0 136 94.1
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 2.0e-39 166.0 133 66.9
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 2.6e-39 165.6 140 65.7
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.3e-38 163.3 138 65.2
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 1.1e-37 160.2 122 68.0
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 3.2e-37 158.7 130 62.3
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.5e-36 155.2 118 68.6
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 4.6e-36 154.8 125 62.4
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.3e-35 152.5 124 62.9
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 2.3e-35 152.5 130 63.8
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 3.9e-35 151.8 140 58.6
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 3.9e-35 151.8 121 65.3
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 5.1e-35 151.4 140 59.3
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 5.1e-35 151.4 125 63.2
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-34 150.2 133 61.7
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-34 150.2 133 61.7
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.5e-34 149.8 128 64.8
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 5.6e-34 147.9 127 60.6
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 9.6e-34 147.1 125 60.0
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 9.6e-34 147.1 127 59.8
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.1e-33 146.0 118 64.4
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 3.7e-33 145.2 122 59.8
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 3.7e-33 145.2 122 59.8
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 3.7e-33 145.2 119 63.9
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 3.7e-33 145.2 125 59.2
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 6.2e-33 144.4 125 60.8
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 8.2e-33 144.1 142 54.9
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.1e-32 143.7 127 60.6
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.1e-32 143.7 127 60.6
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.4e-32 143.3 142 58.5
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.8e-32 142.9 127 59.8
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 2.4e-32 142.5 133 60.2
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.4e-32 142.5 127 59.8
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 3.1e-32 142.1 118 60.2
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 3.1e-32 142.1 127 58.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 4.0e-32 141.7 118 61.0
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 4.0e-32 141.7 118 60.2
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 4.0e-32 141.7 118 60.2
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 4.0e-32 141.7 118 60.2
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 4.0e-32 141.7 123 61.0
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 5.3e-32 141.4 130 60.0
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 6.9e-32 141.0 131 60.3
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 9.0e-32 140.6 138 58.0
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 9.0e-32 140.6 123 60.2
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 9.0e-32 140.6 117 63.2
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 9.0e-32 140.6 131 55.7
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 9.0e-32 140.6 127 59.1
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.2e-31 140.2 116 62.9
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.2e-31 140.2 129 58.1
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 1.5e-31 139.8 127 61.4
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 2.0e-31 139.4 127 61.4
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 2.0e-31 139.4 127 55.1
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 2.0e-31 139.4 127 58.3
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.6e-31 139.0 144 56.2
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 3.4e-31 138.7 136 55.9
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 4.5e-31 138.3 136 53.7
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 5.8e-31 137.9 145 51.7
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.8e-31 137.9 144 56.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 7.6e-31 137.5 145 55.2
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 2.2e-30 136.0 124 53.2
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.9e-30 135.6 125 57.6
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 123 58.5
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 129 58.1
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 3.8e-30 135.2 136 55.1
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 4.9e-30 134.8 136 55.9
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 4.9e-30 134.8 125 56.0
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.9e-30 134.8 149 51.7
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.5e-30 134.4 134 56.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 1.4e-29 133.3 125 56.0
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.4e-29 133.3 121 57.9
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 3.2e-29 132.1 148 53.4
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.2e-28 130.2 125 54.4
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.7e-28 129.0 122 56.6
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.3e-27 126.7 116 55.2
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.8e-27 126.3 121 56.2
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 5.1e-27 124.8 167 46.7
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.1e-26 123.6 113 55.8
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.5e-26 123.2 117 59.0
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.9e-26 122.9 116 54.3
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 2.5e-26 122.5 114 59.6
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 4.3e-26 121.7 113 54.9
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.8e-25 119.0 120 52.5
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.8e-25 119.0 123 52.0
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 3.7e-25 118.6 95 64.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 3.7e-25 118.6 113 54.9
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-24 116.7 120 54.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-24 116.7 121 56.2
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 5.3e-24 114.8 126 49.2
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 6.9e-24 114.4 121 52.1
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 2.0e-23 112.8 133 53.4
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.6e-23 112.5 97 61.9
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-22 110.2 87 62.1
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-22 110.2 80 65.0
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.7e-22 109.8 96 60.4
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.0e-22 108.2 96 59.4
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.1e-21 107.1 125 48.0
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 7.2e-21 104.4 95 55.8
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 4.6e-20 101.7 98 53.1
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 6.1e-20 101.3 108 50.9
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 1.0e-19 100.5 100 55.0
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.1e-18 97.1 121 47.9
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.5e-18 95.9 84 57.1
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.7e-17 93.2 82 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.1e-16 90.5 123 42.3
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.2e-15 87.0 84 54.8
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 4.5e-15 85.1 108 45.4
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.8e-14 82.0 76 56.6
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 6.5e-14 81.3 79 54.4
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 8.5e-14 80.9 98 49.0
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.7e-09 66.6 109 37.6
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 8.5e-06 54.3 39 64.1


User provided reference genes

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