Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.3e-175 618.2 302 100.0
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.2e-148 530.0 299 84.6
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 4.5e-148 528.1 299 83.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.3e-147 526.6 297 85.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.3e-147 526.6 299 84.6
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.9e-147 525.4 300 83.0
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 6.4e-147 524.2 297 84.2
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 6.4e-147 524.2 301 82.7
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.1e-146 523.5 299 83.6
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.4e-146 522.3 299 82.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 4.2e-146 521.5 297 83.5
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 5.4e-146 521.2 299 83.6
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 5.4e-146 521.2 299 83.6
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 5.4e-146 521.2 295 84.1
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 5.4e-146 521.2 297 83.8
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 5.4e-146 521.2 297 83.8
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 7.1e-146 520.8 299 83.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.6e-145 519.6 304 82.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 7.9e-145 517.3 299 83.3
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 7.9e-145 517.3 297 82.8
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 7.9e-145 517.3 301 81.4
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 6.7e-144 514.2 301 80.7
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 8.7e-144 513.8 299 82.3
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-143 513.5 301 80.7
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.1e-143 513.5 300 80.3
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.1e-143 513.5 301 80.7
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.3e-143 511.5 295 82.0
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 7.4e-143 510.8 301 80.1
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 7.4e-143 510.8 301 80.4
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-142 510.0 302 79.8
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-142 510.0 302 79.8
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.6e-142 509.6 295 81.0
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.1e-142 509.2 301 80.4
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.1e-142 509.2 299 80.3
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.7e-142 508.4 302 79.5
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 6.2e-142 507.7 295 80.7
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 8.1e-142 507.3 301 80.1
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 8.1e-142 507.3 302 79.1
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.1e-142 507.3 302 79.5
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.1e-141 506.9 299 81.6
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.4e-141 506.5 299 79.6
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 9.0e-141 503.8 300 79.3
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.6e-140 502.3 318 78.0
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 3.4e-140 501.9 302 78.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 4.9e-139 498.0 299 78.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 6.5e-139 497.7 299 79.6
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 8.4e-139 497.3 302 77.5
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.4e-138 496.5 314 76.8
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.4e-138 496.5 300 78.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.2e-137 493.4 311 75.6
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.1e-137 492.7 295 78.6
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.7e-137 492.3 304 76.6
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.6e-137 491.5 301 79.7
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.8e-136 489.6 301 79.4
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.7e-135 484.6 298 77.2
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.6e-134 483.0 277 83.4
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 2.1e-134 482.6 347 68.6
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.1e-133 480.3 298 75.5
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 6.9e-133 477.6 304 74.3
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 6.9e-133 477.6 319 74.3
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 9.0e-133 477.2 298 75.8
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 9.0e-133 477.2 298 75.5
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.5e-132 476.5 301 76.1
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.0e-132 476.1 294 76.9
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.6e-132 475.7 298 75.5
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.4e-132 475.3 294 76.5
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 5.8e-132 474.6 294 76.5
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.7e-131 473.0 294 76.2
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.7e-131 473.0 294 76.2
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 5.0e-131 471.5 340 70.0
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 8.4e-131 470.7 296 73.6
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 8.4e-131 470.7 296 73.6
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.5e-130 469.2 295 75.9
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.5e-130 469.2 298 74.8
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 5.5e-130 468.0 301 72.4
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 9.3e-130 467.2 293 74.1
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 2.7e-129 465.7 294 73.8
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 6.1e-129 464.5 302 75.2
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.3e-128 463.4 295 71.9
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 5.1e-128 461.5 297 72.7
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.5e-127 459.9 298 73.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.5e-127 459.1 319 70.2
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 9.7e-127 457.2 297 73.4
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 6.3e-126 454.5 296 71.6
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 2.6e-124 449.1 292 72.6
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 3.4e-124 448.7 260 81.2
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 4.5e-124 448.4 298 69.8
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 6.1e-121 438.0 301 71.4
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 6.7e-120 434.5 306 69.0
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 2.0e-119 433.0 301 73.8
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 9.7e-119 430.6 265 75.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 5.3e-117 424.9 290 69.3
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.1e-109 400.6 294 64.3
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 2.9e-107 392.5 221 83.7
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.0e-99 367.5 199 88.4
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 2.2e-99 366.3 293 57.7
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.3e-94 350.5 204 80.9
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.8e-93 346.7 285 58.2
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.8e-93 346.7 291 59.5
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.8e-91 339.0 287 57.5
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 5.9e-84 315.1 199 74.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.0e-76 290.0 167 81.4
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 4.3e-74 282.3 187 71.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 7.8e-68 261.5 259 50.6
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.4e-61 238.8 149 75.2
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 3.3e-58 229.6 142 76.1
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 8.4e-54 214.9 149 69.1
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.3e-50 202.6 142 71.8
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 5.3e-40 169.1 111 73.0
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.7e-38 164.1 103 74.8
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-32 144.8 118 64.4
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 3.2e-29 133.3 86 73.3
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.0e-27 128.3 329 26.4
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.0e-27 126.7 72 84.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.1e-26 124.8 76 78.9
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 3.4e-23 113.2 302 27.5
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 5.8e-23 112.5 70 72.9
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 9.3e-21 105.1 207 30.0
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.9e-10 70.9 41 78.0


User provided reference genes

Program Settings