Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 7.8e-155 550.4 282 100.0
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 6.9e-143 510.8 282 89.7
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 1.7e-141 506.1 282 89.7
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 6.4e-141 504.2 282 88.7
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.9e-140 502.7 282 87.6
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 1.9e-140 502.7 282 87.6
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 3.2e-140 501.9 282 86.9
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 3.2e-140 501.9 280 87.1
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 3.2e-140 501.9 282 88.3
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 5.4e-140 501.1 280 87.5
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.4e-140 501.1 282 86.5
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 1.2e-139 500.0 282 86.5
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.2e-139 500.0 282 86.5
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 5.1e-138 494.6 282 86.9
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 5.1e-138 494.6 282 86.2
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.1e-137 493.4 282 85.5
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.5e-137 492.3 282 85.5
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 2.5e-137 492.3 282 85.5
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 9.6e-137 490.3 282 84.0
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.3e-136 490.0 282 85.1
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 1.3e-136 490.0 282 85.5
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 2.1e-136 489.2 282 85.1
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 2.8e-136 488.8 282 85.5
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 8.1e-136 487.3 282 83.3
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 1.4e-135 486.5 282 84.4
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 1.8e-135 486.1 282 83.0
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.8e-135 486.1 282 85.1
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 2.4e-135 485.7 281 84.7
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 6.9e-135 484.2 282 85.1
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 6.9e-135 484.2 282 85.8
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 9.0e-135 483.8 282 82.6
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 2.6e-134 482.3 282 83.7
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 4.5e-134 481.5 282 84.4
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 4.5e-134 481.5 282 80.5
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 7.6e-134 480.7 282 84.0
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 1.3e-133 479.9 282 81.6
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 1.7e-133 479.6 281 84.0
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 4.9e-133 478.0 282 82.3
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 4.9e-133 478.0 282 82.6
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 8.4e-133 477.2 282 82.6
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 1.9e-132 476.1 282 83.0
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 2.5e-132 475.7 282 83.3
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 2.5e-132 475.7 293 79.5
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 2.5e-132 475.7 282 83.0
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 2.5e-132 475.7 282 83.3
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 3.2e-132 475.3 282 82.3
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 3.2e-132 475.3 282 81.6
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 7.1e-132 474.2 282 82.3
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 7.1e-132 474.2 282 83.7
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.6e-131 471.5 282 81.9
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.3e-130 469.9 269 84.0
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 2.3e-130 469.2 282 83.0
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 5.1e-130 468.0 282 81.9
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 6.7e-130 467.6 284 81.7
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 8.7e-130 467.2 283 82.3
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 3.3e-129 465.3 282 81.2
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 3.3e-129 465.3 282 82.3
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 4.3e-129 464.9 282 82.3
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 5.7e-129 464.5 282 80.1
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 1.3e-128 463.4 282 79.8
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.6e-128 463.0 277 81.9
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.8e-128 462.2 288 80.9
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 4.8e-128 461.5 282 80.5
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 6.2e-128 461.1 282 80.9
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.4e-127 459.9 266 86.1
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 2.4e-127 459.1 282 79.4
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 4.0e-127 458.4 341 70.4
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 6.9e-127 457.6 282 81.2
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 6.9e-127 457.6 282 79.8
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.0e-126 456.1 283 79.2
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 2.6e-126 455.7 278 79.1
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 2.6e-126 455.7 290 78.3
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 5.8e-126 454.5 286 78.3
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 7.6e-126 454.1 283 79.2
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 3.8e-125 451.8 316 72.2
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 6.5e-125 451.1 282 81.2
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 8.4e-125 450.7 285 81.8
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.9e-124 449.5 283 78.1
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.5e-124 449.1 283 77.7
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 9.3e-124 447.2 281 77.9
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.1e-123 446.0 283 77.0
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.7e-123 445.7 286 77.6
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 2.7e-123 445.7 282 77.0
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 6.1e-123 444.5 282 77.3
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 7.9e-123 444.1 286 77.6
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 2.3e-122 442.6 286 77.3
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 2.3e-122 442.6 283 77.7
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 3.0e-122 442.2 266 79.7
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 3.0e-122 442.2 282 76.2
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 5.1e-122 441.4 279 79.2
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 6.7e-122 441.0 286 77.3
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.5e-121 439.9 283 76.3
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 1.9e-121 439.5 282 76.6
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 2.5e-121 439.1 283 76.7
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 7.4e-121 437.6 286 75.5
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.3e-120 436.8 286 76.2
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.6e-120 436.4 286 76.6
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 1.6e-120 436.4 286 76.6
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 1.6e-120 436.4 282 78.4
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 3.7e-120 435.3 286 76.2
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 3.7e-120 435.3 286 76.6
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 3.7e-120 435.3 286 76.2
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 4.8e-120 434.9 313 70.9
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 6.3e-120 434.5 266 78.9
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 8.2e-120 434.1 267 80.1
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 76.2
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 1.4e-119 433.3 282 78.0
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 5.3e-119 431.4 266 79.3
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 9.0e-119 430.6 266 81.2
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 4.5e-118 428.3 281 75.4
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.0e-117 427.2 295 74.2
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 1.7e-117 426.4 325 67.1
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 1.7e-117 426.4 283 75.3
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.2e-117 426.0 286 73.1
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 6.5e-117 424.5 276 76.4
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.9e-116 422.9 282 72.3
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.9e-116 422.9 282 72.3
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 9.4e-116 420.6 282 76.2
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 4.6e-115 418.3 272 77.2
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 7.9e-115 417.5 282 75.2
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 2.5e-113 412.5 240 82.5
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 6.3e-112 407.9 282 74.1
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 6.3e-112 407.9 282 74.1
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 1.1e-111 407.1 243 81.9
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 4.1e-111 405.2 286 69.9
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 4.5e-110 401.7 282 75.5
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 5.9e-110 401.4 272 75.4
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 7.7e-110 401.0 281 69.4
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 1.1e-108 397.1 250 78.0
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 7.2e-108 394.4 287 70.7
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 2.1e-107 392.9 231 83.5
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 6.7e-106 387.9 306 65.0
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 1.1e-105 387.1 283 70.3
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.1e-105 387.1 276 73.2
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 2.0e-102 376.3 213 84.5
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 4.5e-102 375.2 341 61.3
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 6.5e-101 371.3 283 65.0
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.2e-100 368.6 258 75.2
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.4e-100 367.5 266 66.9
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 1.2e-99 367.1 213 82.2
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.1e-99 366.3 279 66.7
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 2.7e-99 365.9 223 79.4
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 1.3e-88 330.5 267 62.5
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 3.7e-88 328.9 249 70.3
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 9.8e-81 304.3 283 57.2
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.4e-79 300.4 281 59.4
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 2.4e-79 299.7 239 65.3
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 1.7e-72 276.9 213 61.5
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 8.3e-56 221.5 173 64.2
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.4e-55 220.7 282 50.0
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 1.7e-53 213.8 173 60.7
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.7e-53 213.8 172 63.4
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.9e-53 212.6 326 44.2
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.6e-51 207.2 211 60.2
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 6.2e-51 205.3 120 77.5
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 4.4e-49 199.1 269 45.4
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 4.7e-43 179.1 122 72.1
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 3.2e-39 166.4 180 51.1
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.3e-29 133.7 85 70.6
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.0e-29 133.3 298 36.9
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 1.1e-28 131.3 275 38.2
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 2.6e-25 120.2 220 33.6
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.9e-24 116.7 120 50.8
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.2e-22 111.3 175 41.7
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.6e-22 110.9 66 84.8
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 3.0e-21 106.7 94 56.4
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 9.6e-20 101.7 118 50.0
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.4e-15 87.8 74 63.5
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 5.1e-13 79.3 47 83.0
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 5.0e-08 62.8 49 63.3
CBR_g928 Chara braunii HOM05D015229 ORTHO05D017822 9.3e-07 58.5 166 32.5


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