Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 6.2e-216 753.8 373 100.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 6.1e-131 471.5 337 66.5
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 3.5e-126 455.7 362 63.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.9e-124 449.9 373 59.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 3.2e-124 449.1 357 61.6
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 9.5e-124 447.6 340 64.4
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.6e-123 446.8 343 62.4
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.1e-123 446.4 340 64.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.8e-123 446.0 340 63.2
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.1e-123 444.9 340 63.8
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 8.0e-123 444.5 361 60.9
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.0e-122 442.6 340 63.5
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.2e-121 440.7 356 61.8
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 2.0e-121 439.9 339 62.5
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 9.8e-121 437.6 356 60.4
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 4.9e-120 435.3 367 58.6
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 4.9e-120 435.3 339 59.9
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.3e-120 434.5 367 58.3
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 4.1e-119 432.2 354 59.0
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 4.1e-119 432.2 369 59.1
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.6e-118 430.3 353 59.8
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.5e-118 429.1 368 56.5
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 3.8e-117 425.6 343 59.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.8e-117 425.6 342 61.4
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.9e-116 423.3 362 56.1
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 3.3e-116 422.5 359 59.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.6e-116 421.8 340 61.8
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 7.3e-116 421.4 340 61.2
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 9.5e-116 421.0 347 57.9
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.6e-115 420.2 313 63.6
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 2.8e-115 419.5 355 57.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.6e-115 419.1 338 59.8
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 4.7e-115 418.7 365 59.2
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 6.1e-115 418.3 350 58.0
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 8.0e-115 417.9 307 63.8
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.8e-114 416.8 339 58.4
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.2e-113 414.1 310 61.9
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.5e-113 413.7 358 57.0
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 1.5e-113 413.7 358 57.0
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 2.6e-113 412.9 371 57.4
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 5.7e-113 411.8 338 58.3
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.7e-113 411.8 345 58.3
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 7.5e-113 411.4 342 59.4
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 9.8e-113 411.0 370 55.9
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.3e-112 410.6 311 62.4
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.7e-112 410.2 350 57.1
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 4.9e-112 408.7 308 64.0
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 4.9e-112 408.7 368 54.6
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.4e-112 408.3 363 56.5
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.4e-111 407.1 359 57.1
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 2.4e-111 406.4 368 54.3
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 2.4e-111 406.4 364 56.0
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 3.2e-111 406.0 344 56.4
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 5.4e-111 405.2 372 52.7
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.6e-110 403.7 335 57.6
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.0e-110 403.3 344 55.8
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 4.6e-110 402.1 351 56.1
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 7.8e-110 401.4 394 53.0
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.3e-109 400.6 361 56.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.0e-109 399.4 341 56.0
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 3.9e-109 399.1 341 56.0
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.9e-109 399.1 368 52.4
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 5.0e-109 398.7 338 57.4
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 5.0e-109 398.7 342 56.7
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 8.6e-109 397.9 366 53.6
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.1e-108 397.5 367 53.7
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.5e-108 396.4 366 53.6
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 3.3e-108 396.0 370 53.8
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 9.5e-108 394.4 370 53.5
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.6e-107 393.7 362 53.3
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 6.8e-106 388.3 342 54.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 7.5e-105 384.8 358 54.2
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 8.3e-104 381.3 360 51.7
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 4.1e-103 379.0 356 55.6
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.6e-102 377.1 307 58.6
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.0e-102 376.7 367 50.4
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.0e-101 374.4 337 56.1
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.7e-101 373.6 340 55.9
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.3e-101 373.2 366 50.8
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.0e-101 372.9 337 55.8
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 5.0e-101 372.1 337 55.5
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 5.0e-101 372.1 342 53.2
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.5e-100 370.5 337 55.5
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 2.5e-100 369.8 349 53.3
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.3e-100 368.2 343 53.9
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 2.1e-99 366.7 340 55.3
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 2.1e-99 366.7 363 49.3
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 4.7e-99 365.5 268 62.7
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 6.2e-99 365.2 336 53.0
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 1.8e-98 363.6 334 51.8
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 6.8e-98 361.7 324 54.0
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 2.6e-97 359.8 249 68.7
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 3.4e-97 359.4 337 52.5
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 4.4e-97 359.0 334 51.8
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 5.8e-97 358.6 377 50.9
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.2e-96 356.7 307 55.7
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.9e-96 356.3 364 49.5
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.9e-95 353.6 413 44.3
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.9e-95 353.6 364 49.2
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 1.6e-94 350.5 336 52.4
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.6e-94 350.5 373 48.5
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.5e-94 349.4 347 53.0
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.7e-93 347.1 355 51.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 2.3e-93 346.7 354 50.6
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.0e-93 346.3 363 50.1
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-92 344.4 343 51.0
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.3e-92 342.4 295 54.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 5.6e-92 342.0 358 47.8
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 7.3e-92 341.7 371 48.5
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.2e-89 334.3 362 49.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 3.4e-89 332.8 342 50.6
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 3.4e-89 332.8 295 55.9
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.9e-88 329.7 338 50.9
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 3.8e-88 329.3 342 50.0
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 6.4e-88 328.6 311 50.5
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 3.2e-87 326.2 341 49.3
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 7.1e-87 325.1 363 47.1
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 9.2e-87 324.7 342 50.3
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.1e-86 323.6 370 46.8
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-86 323.6 367 46.3
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 6.0e-86 322.0 366 47.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.3e-85 320.9 367 46.0
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.7e-85 320.5 346 48.8
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 1.7e-85 320.5 363 46.6
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 3.0e-85 319.7 366 47.3
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.0e-85 319.7 344 47.7
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 8.7e-85 318.2 364 46.2
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 8.7e-85 318.2 367 45.8
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 9.6e-84 314.7 358 45.3
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.4e-82 310.1 302 49.3
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 4.0e-82 309.3 343 47.5
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 4.4e-81 305.8 342 47.4
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 4.4e-81 305.8 342 47.4
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 7.6e-81 305.1 351 46.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 9.9e-81 304.7 342 47.1
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.3e-80 304.3 273 54.6
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.0e-78 295.4 323 45.8
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 2.5e-76 290.0 338 43.2
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 7.3e-76 288.5 326 44.2
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.6e-75 287.3 225 60.9
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.3e-71 271.6 325 44.6
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.8e-67 260.0 333 41.4
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 6.2e-67 258.8 316 44.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.4e-65 253.1 315 42.2
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.9e-63 247.3 273 47.3
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.7e-62 243.4 315 41.3
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.8e-61 240.7 315 41.0
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.1e-60 238.0 292 43.2
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.2e-59 232.3 225 51.1
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.1e-58 229.9 283 37.1
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.5e-57 226.1 324 38.6
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 5.8e-57 225.7 269 41.3
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 4.9e-56 222.6 339 38.3
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.1e-55 218.8 210 48.6
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 6.7e-53 212.2 286 37.8
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.6e-51 207.6 272 37.9
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.7e-46 190.3 322 34.8
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.7e-46 190.3 322 34.8
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.9e-45 186.4 205 44.4
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.8e-43 179.5 148 54.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 9.1e-42 175.3 134 61.9
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.9e-40 170.2 138 57.2
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.6e-38 164.5 118 66.1
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.7e-35 153.3 154 48.1
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.6e-30 137.9 108 61.1
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 3.6e-30 136.7 127 52.8
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.0e-28 131.0 229 34.1
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.1e-26 123.6 116 52.6
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.3e-24 118.2 163 38.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.1e-23 115.2 87 59.8
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 1.8e-18 97.8 177 29.4
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.3e-18 96.3 102 44.1
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 6.5e-16 89.4 61 63.9
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 7.5e-12 75.9 103 43.7
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 2.2e-11 74.3 74 52.7
CBR_g4192 Chara braunii HOM05D000019 ORTHO05D022303 3.8e-08 63.5 137 27.7


User provided reference genes

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