Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 7.2e-248 860.1 439 100.0
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 2.8e-199 698.7 441 78.5
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 2.2e-119 433.3 407 50.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.7e-114 416.4 415 49.9
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 2.3e-113 413.3 409 48.9
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.0e-112 410.2 401 49.4
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.4e-112 409.1 410 49.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 5.7e-112 408.7 410 50.0
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.7e-111 407.1 416 48.6
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.8e-111 405.6 415 48.0
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 4.8e-111 405.6 406 49.5
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 4.8e-111 405.6 407 49.9
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.4e-110 404.1 405 48.1
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 3.1e-110 402.9 406 49.5
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 5.4e-110 402.1 408 49.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.0e-110 401.7 414 47.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 9.1e-110 401.4 405 48.1
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-109 401.0 416 47.6
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.2e-109 401.0 413 48.2
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 2.0e-109 400.2 440 47.7
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 3.5e-109 399.4 406 47.8
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 5.9e-109 398.7 411 48.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.0e-108 397.9 410 48.0
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.9e-108 396.4 403 47.6
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 6.6e-108 395.2 409 47.2
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 3.3e-107 392.9 399 48.6
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 4.2e-107 392.5 403 46.2
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.6e-106 390.6 414 45.9
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.6e-106 390.6 413 45.8
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 4.0e-105 386.0 411 46.5
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 7.5e-104 381.7 409 48.4
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.7e-103 379.4 403 48.1
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 8.3e-103 378.3 403 48.4
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 8.3e-103 378.3 409 45.2
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.1e-102 375.9 378 50.0
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.6e-101 374.0 413 46.7
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.6e-101 374.0 409 46.7
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 2.0e-101 373.6 411 45.7
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 2.0e-101 373.6 415 46.3
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 4.5e-101 372.5 413 46.5
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.3e-100 370.9 404 45.3
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.7e-100 370.5 405 46.4
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 5.0e-100 369.0 402 45.5
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 6.6e-100 368.6 407 45.7
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 8.6e-100 368.2 412 45.1
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.1e-99 367.9 408 44.9
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.1e-99 367.9 417 43.9
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.1e-99 367.9 464 43.3
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 1.9e-99 367.1 405 44.9
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 3.3e-99 366.3 403 43.4
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 3.3e-99 366.3 508 38.2
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 5.6e-99 365.5 412 45.4
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 7.3e-99 365.2 408 44.1
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 9.5e-99 364.8 403 43.9
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 9.5e-99 364.8 403 43.7
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 9.5e-99 364.8 416 44.7
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.6e-98 364.0 416 45.2
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 2.8e-98 363.2 403 43.7
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 3.6e-98 362.8 424 43.4
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 6.1e-98 362.1 433 41.8
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 8.0e-98 361.7 404 46.8
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 2.3e-97 360.1 467 42.6
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 2.3e-97 360.1 411 44.8
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 6.8e-97 358.6 403 43.7
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.5e-96 357.5 411 44.8
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.0e-96 357.1 407 43.2
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 3.4e-96 356.3 405 44.9
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 7.5e-96 355.1 424 41.7
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 9.8e-96 354.8 404 44.1
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 3.7e-95 352.8 420 42.1
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 3.7e-95 352.8 426 43.2
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.9e-94 350.5 411 42.3
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 2.4e-94 350.1 307 52.8
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.3e-92 344.4 422 41.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.9e-92 342.8 307 51.8
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 3.3e-91 339.7 308 51.9
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 7.3e-91 338.6 397 43.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.2e-90 337.8 449 41.4
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.0e-88 330.5 406 41.1
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 4.6e-85 319.3 368 43.5
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.2e-82 311.2 309 47.9
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.6e-80 303.5 415 40.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.9e-78 297.4 382 42.4
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 4.1e-78 296.2 350 44.0
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.3e-76 290.4 407 39.3
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-74 284.6 437 41.4
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.8e-74 283.5 437 41.2
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.4e-70 270.4 434 40.3
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 4.2e-70 269.6 293 45.1
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.1e-70 268.9 435 40.0
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.2e-66 255.8 435 38.9
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 5.4e-62 242.7 256 45.3
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 8.7e-60 235.3 407 34.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 4.3e-59 233.0 252 44.0
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 2.6e-56 223.8 272 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 2.9e-55 220.3 447 29.1
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.7e-53 213.8 343 36.4
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-52 211.5 403 34.5
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.5e-51 207.2 240 42.1
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.8e-50 203.8 204 47.1
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.7e-47 194.5 195 48.2
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 7.9e-45 185.7 389 30.8
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 7.9e-45 185.7 389 30.8
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.0e-44 185.3 398 29.1
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.3e-43 179.9 232 37.1
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 3.7e-42 176.8 310 38.7
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 1.8e-41 174.5 208 44.2
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 7.2e-38 162.5 230 39.1
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.2e-38 162.5 230 39.1
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.0e-36 158.7 147 50.3
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.3e-36 157.5 147 52.4
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 7.4e-35 152.5 226 38.5
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 1.3e-34 151.8 282 33.0
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 6.3e-34 149.4 347 31.7
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.8e-33 147.9 224 37.5
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-31 141.0 135 52.6
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 7.2e-30 136.0 291 29.6
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.6e-29 134.8 377 26.5
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 7.9e-29 132.5 140 40.0
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 1.5e-27 128.3 376 25.0
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.3e-23 115.2 150 42.7
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.2e-22 110.2 114 46.5
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 9.4e-22 109.0 133 42.9
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 2.6e-16 90.9 100 45.0
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 3.5e-16 90.5 107 42.1
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 2.2e-15 87.8 72 50.0
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 9.7e-11 72.4 99 40.4
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 3.5e-08 63.9 63 46.0
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.2e-06 57.0 102 36.3


User provided reference genes

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