Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.2e-65 253.1 129 100.0
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.2e-41 173.3 129 64.3
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.0e-41 172.6 128 67.2
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.0e-41 172.6 124 67.7
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 2.7e-41 172.2 122 68.0
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 4.5e-41 171.4 124 66.9
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 4.5e-41 171.4 128 64.8
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 5.9e-41 171.0 128 64.8
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.7e-41 170.6 125 64.0
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.7e-41 170.6 125 64.0
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 7.7e-41 170.6 120 68.3
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.3e-40 169.9 128 63.3
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 2.2e-40 169.1 128 65.6
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.9e-40 168.7 124 65.3
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 5.0e-40 167.9 126 63.5
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 6.5e-40 167.5 128 64.1
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 8.5e-40 167.2 128 63.3
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 1.1e-39 166.8 123 66.7
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 1.1e-39 166.8 122 64.8
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 5.5e-39 164.5 124 62.9
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 7.2e-39 164.1 128 61.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 9.4e-39 163.7 126 65.1
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 2.7e-38 162.2 128 61.7
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 2.7e-38 162.2 124 64.5
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 2.7e-38 162.2 122 62.3
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 3.6e-38 161.8 122 63.9
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.6e-38 161.8 124 62.9
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.6e-38 161.8 126 64.3
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 4.7e-38 161.4 127 63.8
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 6.1e-38 161.0 124 64.5
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 6.1e-38 161.0 129 59.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 8.0e-38 160.6 126 60.3
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.0e-37 160.2 126 61.1
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 1.0e-37 160.2 124 63.7
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.0e-37 160.2 126 64.3
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.4e-37 159.8 122 62.3
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.8e-37 159.5 124 60.5
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.8e-37 159.5 120 61.7
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.8e-37 159.5 129 59.7
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 2.3e-37 159.1 126 60.3
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 3.0e-37 158.7 126 60.3
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 3.0e-37 158.7 128 60.2
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 5.2e-37 157.9 126 59.5
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 5.2e-37 157.9 126 61.1
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.2e-36 156.8 120 61.7
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-36 156.8 120 61.7
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.2e-36 156.8 120 61.7
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.2e-36 156.8 124 62.9
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.2e-36 156.8 124 61.3
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.4e-36 155.2 108 68.5
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 3.4e-36 155.2 122 63.1
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 3.4e-36 155.2 120 61.7
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 4.4e-36 154.8 126 58.7
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 4.4e-36 154.8 124 60.5
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 5.7e-36 154.5 126 58.7
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 5.7e-36 154.5 122 61.5
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.7e-36 154.5 124 58.9
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 7.5e-36 154.1 124 59.7
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 7.5e-36 154.1 122 61.5
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.3e-35 153.3 122 61.5
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 1.7e-35 152.9 129 58.1
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.7e-35 152.9 108 67.6
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.7e-35 152.9 125 58.4
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.7e-35 152.9 140 55.7
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 2.2e-35 152.5 122 59.8
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.8e-35 152.1 126 57.9
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 3.7e-35 151.8 120 60.0
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 3.7e-35 151.8 122 57.4
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.7e-35 151.8 93 82.8
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 4.8e-35 151.4 113 63.7
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 6.3e-35 151.0 120 59.2
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 8.3e-35 150.6 124 59.7
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 8.3e-35 150.6 122 60.7
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 8.3e-35 150.6 122 60.7
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 8.3e-35 150.6 122 60.7
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.1e-34 150.2 122 59.8
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.8e-34 149.4 129 56.6
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.8e-34 149.4 122 59.8
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 2.4e-34 149.1 122 59.8
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 4.1e-34 148.3 127 59.1
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 7.0e-34 147.5 99 80.8
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 9.1e-34 147.1 125 59.2
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 9.1e-34 147.1 122 60.7
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 1.6e-33 146.4 120 56.7
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.5e-33 145.2 123 56.1
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 1.7e-32 142.9 128 51.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.7e-32 142.9 122 53.3
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 3.8e-32 141.7 159 48.4
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 6.5e-32 141.0 122 52.5
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.5e-31 139.8 122 52.5
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.0e-29 133.7 165 44.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.8e-29 132.9 100 63.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.0e-29 132.1 101 63.4
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 6.8e-29 131.0 134 54.5
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.4e-28 128.3 175 42.9
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 2.2e-27 125.9 122 50.0
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 2.8e-27 125.6 122 49.2
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 2.8e-27 125.6 119 48.7
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 6.6e-24 114.4 122 49.2
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 8.6e-24 114.0 98 56.1
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 1.1e-23 113.6 95 58.9
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.5e-23 113.2 98 59.2
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.3e-23 112.1 98 56.1
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 7.3e-23 110.9 107 50.5
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.2e-22 110.2 98 55.1
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 2.1e-22 109.4 77 70.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.8e-22 109.0 99 54.5
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.0e-21 107.1 94 55.3
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.0e-21 107.1 94 55.3
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 1.8e-21 106.3 94 54.3
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.8e-21 106.3 95 56.8
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 3.4e-20 102.1 99 51.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 3.2e-18 95.5 101 49.5
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 2.7e-17 92.4 94 47.9
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 5.9e-17 91.3 102 43.1
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.7e-16 89.7 100 38.0
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 3.1e-13 79.0 124 37.9
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 3.4e-12 75.5 69 50.7
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 7.5e-12 74.3 88 48.9
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 3.0e-08 62.4 113 30.1


User provided reference genes

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