Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.7e-174 615.9 325 100.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.3e-166 589.0 324 95.4
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.3e-86 323.2 226 76.5
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 9.9e-61 238.0 325 47.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 5.1e-57 225.7 291 48.8
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 9.6e-56 221.5 293 46.8
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.8e-55 219.2 292 46.6
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.1e-54 218.0 281 47.3
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.8e-54 217.2 279 47.7
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 5.3e-54 215.7 325 45.2
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.2e-53 214.5 272 47.8
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.2e-53 214.5 323 44.9
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.5e-53 214.2 292 44.5
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.0e-53 213.8 297 46.8
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 5.8e-53 212.2 278 46.4
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 5.8e-53 212.2 333 45.0
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.3e-52 211.1 284 45.1
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 4.9e-52 209.1 289 44.6
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.9e-52 209.1 276 48.2
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 8.4e-52 208.4 274 46.0
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 8.4e-52 208.4 332 43.4
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.1e-51 208.0 309 44.7
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.1e-51 208.0 291 45.7
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.4e-51 207.6 290 43.8
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.4e-51 207.6 299 45.8
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.4e-51 207.6 313 45.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.9e-51 207.2 296 44.6
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.4e-51 206.8 306 44.4
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 3.2e-51 206.5 281 45.2
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 4.2e-51 206.1 282 43.6
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.2e-50 204.5 306 45.1
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.2e-50 204.5 329 43.2
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.6e-50 204.1 327 41.6
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.7e-50 203.4 284 45.1
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 3.5e-50 203.0 316 43.7
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 6.0e-50 202.2 301 44.5
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 6.0e-50 202.2 314 43.0
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.0e-49 201.4 292 44.2
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.3e-49 201.1 274 43.8
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.8e-49 200.7 293 44.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.9e-49 199.5 296 44.6
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.1e-49 199.1 295 47.1
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 6.7e-49 198.7 280 44.3
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 6.7e-49 198.7 304 45.1
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 6.7e-49 198.7 291 44.3
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 6.7e-49 198.7 290 45.2
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.9e-48 197.2 291 41.2
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.9e-48 197.2 281 44.1
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 2.5e-48 196.8 285 43.5
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.3e-48 196.4 281 44.5
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 4.3e-48 196.1 285 45.3
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 9.6e-48 194.9 306 43.1
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.3e-47 194.5 271 42.8
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.3e-47 194.5 293 44.7
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.6e-47 194.1 275 47.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 2.1e-47 193.7 291 41.9
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.8e-47 193.4 290 43.1
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 6.2e-47 192.2 275 44.7
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 6.2e-47 192.2 311 41.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-46 191.4 290 42.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.4e-46 190.3 276 44.6
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 4.0e-46 189.5 279 43.0
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 4.5e-45 186.0 289 42.6
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 5.8e-45 185.7 282 43.6
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 7.6e-45 185.3 298 42.3
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.0e-44 184.9 276 44.9
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.0e-44 184.9 287 43.6
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.3e-44 184.5 276 43.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.3e-44 184.5 292 41.8
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.2e-44 183.7 295 42.7
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.9e-44 182.6 254 45.3
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.4e-43 181.0 320 39.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.5e-43 180.3 262 43.5
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 5.5e-43 179.1 272 43.4
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.5e-43 179.1 276 44.2
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 5.5e-43 179.1 291 43.0
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 9.3e-43 178.3 256 42.6
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 1.2e-42 177.9 275 41.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.6e-42 177.6 262 42.4
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.7e-42 176.8 297 44.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 3.5e-42 176.4 270 42.2
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 7.9e-42 175.3 279 40.9
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.3e-41 173.7 291 41.2
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 8.7e-41 171.8 260 43.5
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 8.7e-41 171.8 256 41.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-40 171.4 318 38.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.1e-40 171.4 280 41.8
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 4.3e-40 169.5 242 44.6
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 9.6e-40 168.3 265 42.6
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 9.6e-40 168.3 231 44.6
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.6e-39 167.5 322 36.6
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.8e-39 166.8 270 40.0
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 4.1e-38 162.9 215 44.7
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 6.9e-38 162.2 317 38.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.5e-37 161.0 294 40.1
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.7e-36 157.5 231 44.6
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 5.0e-36 156.0 300 40.0
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.5e-35 153.7 323 37.5
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 7.2e-35 152.1 241 41.5
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 4.6e-34 149.4 389 33.7
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.6e-34 149.4 279 40.1
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 6.1e-34 149.1 230 47.4
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.3e-33 147.9 318 35.5
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.5e-32 144.4 307 38.1
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.9e-32 144.1 264 37.9
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 2.4e-30 137.1 323 35.3
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.0e-29 134.0 182 48.4
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.4e-27 127.9 160 46.9
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.1e-26 124.0 490 26.5
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 1.1e-24 118.2 269 36.8
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 4.4e-24 116.3 257 35.0
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 9.7e-24 115.2 213 40.4
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.3e-23 114.8 327 35.2
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 3.1e-22 110.2 255 34.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.2e-15 87.4 181 36.5
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 3.1e-14 83.6 95 47.4
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 7.0e-14 82.4 336 30.1
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.0e-13 80.9 82 52.4


User provided reference genes

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