Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0497432 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 3.6e-117 425.2 267 100.0
Os10g0497300 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 3.5e-80 302.4 233 80.3
Os10g0495100 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 2.8e-77 292.7 228 78.5
Os10g0495200 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 8.1e-77 291.2 233 88.4
Os10g0499500 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 6.2e-61 238.4 190 75.3
Os08g0248400 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.1e-54 217.6 239 72.0
Os08g0107800 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 3.6e-40 169.5 199 58.3
Os08g0107700 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 2.4e-36 156.8 256 47.3
Os08g0110200 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 4.7e-32 142.5 164 61.6
Zm00001eb345170 Zea mays HOM05D009701 ORTHO05D012112 4.1e-28 129.4 144 50.0
Zm00001eb345130 Zea mays HOM05D009701 ORTHO05D012112 8.5e-26 121.7 144 48.6
Zm00001eb065260 Zea mays HOM05D009701 ORTHO05D012112 1.1e-20 104.8 172 39.5
Zm00001eb114490 Zea mays HOM05D009701 ORTHO05D012112 4.1e-20 102.8 172 39.0
Zm00001eb114600 Zea mays HOM05D009701 ORTHO05D012112 1.2e-19 101.3 172 38.4
Zm00001eb114690 Zea mays HOM05D009701 ORTHO05D012112 1.2e-19 101.3 172 38.4
Zm00001eb114660 Zea mays HOM05D009701 ORTHO05D012112 1.6e-19 100.9 172 38.4
Zm00001eb114520 Zea mays HOM05D009701 ORTHO05D012112 5.9e-19 99.0 146 42.5
Os10g0497366 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.4e-15 87.8 148 41.9
Zm00001eb301710 Zea mays HOM05D009701 ORTHO05D012112 2.2e-13 80.5 102 42.2
Aqoxy4G01012 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 6.3e-13 79.0 130 34.6
MBI11_g34857_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 9.1e-12 75.1 92 38.0
Actinidia06229 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.6e-11 74.3 120 35.0
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 5.9e-11 72.4 122 29.5
Nn3g18307 Nelumbo nucifera HOM05D000162 ORTHO05D000090 3.8e-10 69.7 114 30.7
Os04g0350000 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 5.0e-10 69.3 102 43.1
PSO063G5422 Papaver somniferum HOM05D000162 ORTHO05D000090 6.5e-10 68.9 80 45.0
PSO017G5411 Papaver somniferum HOM05D000162 ORTHO05D000090 8.5e-10 68.6 103 35.9
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.5e-09 67.8 127 31.5
RcHm_v2.0_Chr4g0414121 Rosa chinensis HOM05D000162 ORTHO05D000090 3.2e-09 66.6 136 30.1
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 4.2e-09 66.2 153 33.3
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 4.2e-09 66.2 153 33.3
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 5.5e-09 65.9 154 27.9
Migut.G01199 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.5e-09 65.9 127 33.1
Migut.G01191 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.2e-09 65.5 130 30.0
Nn5g28361 Nelumbo nucifera HOM05D000162 ORTHO05D000090 9.4e-09 65.1 117 30.8
SalBow1G5498 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.4e-09 65.1 115 35.7
Actinidia04473 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.2e-08 64.7 121 28.1
Aqoxy4G00879 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 1.2e-08 64.7 75 38.7
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 1.2e-08 64.7 127 29.1
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 1.2e-08 64.7 75 38.7
Migut.G01207 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.6e-08 64.3 69 43.5
SalBow1G0248 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.6e-08 64.3 115 35.7
Cc07_g19010 Coffea canephora HOM05D000162 ORTHO05D000090 2.1e-08 63.9 92 35.9
Lj1g0012010 Lotus japonicus HOM05D000162 ORTHO05D000090 2.1e-08 63.9 108 32.4
Cc07_g18980 Coffea canephora HOM05D000162 ORTHO05D000090 2.7e-08 63.5 92 34.8
HanXRQChr13g0424461 Helianthus annuus HOM05D000162 ORTHO05D000090 2.7e-08 63.5 127 28.3
Migut.G01156 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.6e-08 63.2 72 40.3
Migut.G01181 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.6e-08 63.2 72 41.7
Lsat_1_v5_gn_2_107460 Lactuca sativa HOM05D000162 ORTHO05D000090 3.6e-08 63.2 115 32.2
Aqoxy2G01058 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 4.7e-08 62.8 62 45.2
Migut.G00829 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.7e-08 62.8 127 31.5
Migut.G01162 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.7e-08 62.8 69 43.5
Migut.G01186 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.7e-08 62.8 127 30.7
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.7e-08 62.8 130 32.3
SalBow4G2488 Salvia bowleyana HOM05D000162 ORTHO05D000090 4.7e-08 62.8 94 36.2
Migut.G01171 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.1e-08 62.4 129 30.2
Migut.G01172 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.1e-08 62.4 72 40.3
Migut.G01180 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.1e-08 62.4 127 30.7
Prupe.1G160300 Prunus persica HOM05D000162 ORTHO05D000090 6.1e-08 62.4 220 24.1
Sc05g0000860 Simmondsia chinensis HOM05D000162 ORTHO05D000090 6.1e-08 62.4 90 34.4
Migut.G00832 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.0e-08 62.0 72 40.3
Aqoxy5G03347 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 1.0e-07 61.6 125 32.0
Migut.G00831 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.0e-07 61.6 127 31.5
Peaxi162Scf00129g00156 Petunia axillaris HOM05D000162 ORTHO05D000090 1.0e-07 61.6 128 32.0
SalBow2G3114 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.0e-07 61.6 127 31.5
SalBow7G4032 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.0e-07 61.6 126 31.0
Migut.A01142 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.4e-07 61.2 72 40.3
Migut.G01166 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.4e-07 61.2 75 41.3
Migut.G01168 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.4e-07 61.2 69 40.6
Lalb_Chr05g0220111 Lupinus albus HOM05D000162 ORTHO05D000090 1.4e-07 61.2 108 32.4
Aqoxy2G00962 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 1.8e-07 60.8 121 34.7
Ciclev10007125m.g Citrus clementina HOM05D024618 ORTHO05D000090 1.8e-07 60.8 77 37.7
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 1.8e-07 60.8 128 28.9
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.8e-07 60.8 124 31.5
SalBow6G6998 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.8e-07 60.8 128 32.8
vmacro08416 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.8e-07 60.8 133 28.6
Migut.F00849 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.3e-07 60.5 131 29.8
Migut.G01173 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.3e-07 60.5 133 28.6
Migut.O00664 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.3e-07 60.5 118 32.2
Gorai.009G377900 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.3e-07 60.5 112 29.5
VMungo1383G3689 Vigna mungo HOM05D000162 ORTHO05D000090 2.3e-07 60.5 114 31.6
Migut.G01052 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.0e-07 60.1 69 42.0
Migut.G01170 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.0e-07 60.1 69 42.0
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 3.0e-07 60.1 130 27.7
vmacro13800 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.0e-07 60.1 134 29.1
BcaC07g41685 Brassica carinata HOM05D000162 ORTHO05D000090 4.0e-07 59.7 128 30.5
BolC8t52255H Brassica oleracea HOM05D000162 ORTHO05D000090 4.0e-07 59.7 128 30.5
CSS0009041 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 4.0e-07 59.7 114 29.8
Cc07_g18940 Coffea canephora HOM05D000162 ORTHO05D000090 4.0e-07 59.7 125 28.0
Glyma.18G228500 Glycine max HOM05D000162 ORTHO05D000090 4.0e-07 59.7 115 31.3
Nitab4.5_0003318g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 4.0e-07 59.7 130 29.2
Nitab4.5_0006665g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 4.0e-07 59.7 129 29.5
Migut.G01188 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.2e-07 59.3 127 29.1
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 5.2e-07 59.3 126 28.6
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.2e-07 59.3 132 28.8
SGA_v2.0_scaffold225G43016 Striga asiatica HOM05D000162 ORTHO05D000090 5.2e-07 59.3 124 34.7
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.8e-07 58.9 215 24.2
Migut.G00713 Erythranthe guttata HOM05D000162 ORTHO05D000090 6.8e-07 58.9 128 29.7
Phvul.008G069700 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 6.8e-07 58.9 114 29.8
PGR044G1745 Punica granatum HOM05D000162 ORTHO05D000090 6.8e-07 58.9 123 30.1
THA.LOC104809083 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 6.8e-07 58.9 143 31.5
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 8.8e-07 58.5 98 32.7
BolC8t52228H Brassica oleracea HOM05D000162 ORTHO05D000090 8.8e-07 58.5 115 30.4
Cc00_g03850 Coffea canephora HOM05D000162 ORTHO05D000090 8.8e-07 58.5 127 28.3
Migut.G01194 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.8e-07 58.5 69 40.6
Lsat_1_v5_gn_2_107320 Lactuca sativa HOM05D002667 ORTHO05D002909 8.8e-07 58.5 109 33.9
SGA_v2.0_scaffold1G00577 Striga asiatica HOM05D000162 ORTHO05D000090 8.8e-07 58.5 94 33.0
Migut.G01164 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-06 58.2 130 29.2
Migut.G01184 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-06 58.2 127 29.1
Migut.G01196 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-06 58.2 126 29.4
SalBow2G1354 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.2e-06 58.2 128 31.2
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 1.5e-06 57.8 116 26.7
Migut.G00851 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.5e-06 57.8 127 28.3
Glyma.09G263602 Glycine max HOM05D000162 ORTHO05D000090 1.5e-06 57.8 114 30.7
Gorai.006G247100 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.5e-06 57.8 121 29.8
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.5e-06 57.8 124 29.8
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 1.5e-06 57.8 115 30.4
SalBow3G4453 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.5e-06 57.8 129 31.0
vmacro08418 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.5e-06 57.8 65 41.5
Aqoxy5G04021 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 2.0e-06 57.4 134 26.9
MSTRG.9027 Avicennia marina HOM05D000162 ORTHO05D000090 2.0e-06 57.4 124 30.6
CSS0002817 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.0e-06 57.4 73 37.0
CSS0038623 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.0e-06 57.4 134 26.9
Cc07_g18960 Coffea canephora HOM05D000162 ORTHO05D000090 2.0e-06 57.4 128 28.1
Gohir.D09G225500 Gossypium hirsutum HOM05D000162 ORTHO05D000090 2.0e-06 57.4 121 29.8
Nn7g36861 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.0e-06 57.4 110 29.1
Peaxi162Scf00129g01534 Petunia axillaris HOM05D000162 ORTHO05D000090 2.0e-06 57.4 105 33.3
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 2.0e-06 57.4 109 29.4
vmacro13802 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.0e-06 57.4 134 29.1
Cc00_g04090 Coffea canephora HOM05D000162 ORTHO05D000090 2.6e-06 57.0 128 28.1
Migut.N00243 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.6e-06 57.0 108 30.6
Lsat_1_v5_gn_3_111261 Lactuca sativa HOM05D000162 ORTHO05D000090 2.6e-06 57.0 130 30.0
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 2.6e-06 57.0 130 27.7
SalBow3G3310 Salvia bowleyana HOM05D000162 ORTHO05D000090 2.6e-06 57.0 164 25.6
Aqoxy6G02184 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 3.4e-06 56.6 122 29.5
Cc05_g10980 Coffea canephora HOM05D002453 ORTHO05D008746 3.4e-06 56.6 75 36.0
Migut.G01163 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.4e-06 56.6 72 37.5
Migut.G01206 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.4e-06 56.6 126 28.6
Gohir.A09G223600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 3.4e-06 56.6 121 29.8
Lsat_1_v5_gn_1_11600 Lactuca sativa HOM05D000162 ORTHO05D000090 3.4e-06 56.6 60 38.3
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 3.4e-06 56.6 112 29.5
Medtr6g445300 Medicago truncatula HOM05D000162 ORTHO05D000090 3.4e-06 56.6 104 30.8
vmacro08421 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.4e-06 56.6 88 31.8
vmacro08436 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.4e-06 56.6 90 32.2
CANSAT78G1348 Cannabis sativa HOM05D000162 ORTHO05D000090 4.4e-06 56.2 132 31.1
Migut.G01161 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.4e-06 56.2 62 40.3
Glyma.02G002650 Glycine max HOM05D000162 ORTHO05D000090 4.4e-06 56.2 71 38.0
Peaxi162Scf00154g00321 Petunia axillaris HOM05D000162 ORTHO05D000090 4.4e-06 56.2 69 39.1
SalBow8G4095 Salvia bowleyana HOM05D003489 ORTHO05D004109 4.4e-06 56.2 91 36.3
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 5.7e-06 55.8 122 29.5
BolC8t52131H Brassica oleracea HOM05D003784 ORTHO05D004345 5.7e-06 55.8 122 29.5
CSS0005197 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 5.7e-06 55.8 64 35.9
AUR62000326 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.7e-06 55.8 51 47.1
Migut.G01202 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.7e-06 55.8 69 36.2
Peaxi162Scf00154g00046 Petunia axillaris HOM05D000162 ORTHO05D000090 5.7e-06 55.8 66 40.9
Peaxi162Scf00689g00424 Petunia axillaris HOM05D000162 ORTHO05D000090 5.7e-06 55.8 65 38.5
SalBow3G2341 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.7e-06 55.8 127 28.3
SalBow3G4441 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.7e-06 55.8 127 28.3
CSS0025075 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.5e-06 55.5 98 30.6
Cc06_g18850 Coffea canephora HOM05D000162 ORTHO05D000090 7.5e-06 55.5 206 26.7
Migut.G01205 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.5e-06 55.5 127 27.6
Hma1.2p1_1076F.1_g254530 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.5e-06 55.5 125 30.4
MBI11_g20198_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 7.5e-06 55.5 95 30.5
Oeu031435.1 Olea europaea HOM05D000162 ORTHO05D000090 7.5e-06 55.5 71 36.6
PSO732G0487 Papaver somniferum HOM05D000162 ORTHO05D000090 7.5e-06 55.5 94 31.9
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 7.5e-06 55.5 63 36.5
Hund07146 Selenicereus undatus HOM05D000162 ORTHO05D000090 7.5e-06 55.5 58 43.1
vmacro13730 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 7.5e-06 55.5 135 31.1
Actinidia04475 Actinidia chinensis HOM05D000162 ORTHO05D000090 9.8e-06 55.1 133 27.1
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 9.8e-06 55.1 128 27.3
A09p63670 Brassica napus HOM05D000162 ORTHO05D000090 9.8e-06 55.1 115 30.4
CiPaw.08G122500 Carya illinoinensis HOM05D000162 ORTHO05D000090 9.8e-06 55.1 109 29.4
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 9.8e-06 55.1 139 29.5
SalBow3G3365 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.8e-06 55.1 129 29.5


User provided reference genes

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