Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.1e-191 672.2 328 100.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 8.8e-150 533.9 273 93.0
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 7.2e-144 514.2 291 85.2
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.6e-143 513.1 272 89.0
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.6e-143 511.9 321 79.1
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 3.6e-143 511.9 289 85.8
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.1e-143 511.1 300 82.3
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.0e-142 510.4 305 81.6
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.4e-142 510.0 291 83.5
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.4e-142 510.0 295 82.4
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.3e-142 509.2 308 80.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.0e-142 508.4 296 84.1
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.0e-142 508.4 296 82.1
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.0e-142 508.4 272 87.9
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.0e-142 508.4 272 87.9
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.2e-142 508.1 315 79.7
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 5.2e-142 508.1 304 81.2
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 8.8e-142 507.3 317 79.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 8.8e-142 507.3 272 87.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 8.8e-142 507.3 272 87.9
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.2e-141 506.9 272 87.9
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.2e-141 506.9 272 87.5
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.0e-141 506.1 297 82.5
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-141 506.1 272 87.9
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.6e-141 505.8 310 79.4
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.6e-141 505.8 273 87.2
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 3.4e-141 505.4 310 80.3
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 3.4e-141 505.4 272 86.8
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 4.4e-141 505.0 272 86.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 5.7e-141 504.6 315 80.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 5.7e-141 504.6 272 87.9
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 5.7e-141 504.6 311 80.7
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 5.7e-141 504.6 276 85.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 7.5e-141 504.2 303 80.9
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.5e-141 504.2 281 85.1
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 9.8e-141 503.8 317 79.8
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.3e-140 503.4 292 83.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.7e-140 503.1 310 79.4
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.7e-140 503.1 270 86.3
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.2e-140 502.7 273 87.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.2e-140 502.7 272 87.1
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.8e-140 502.3 272 87.1
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.7e-140 501.9 272 87.5
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.7e-140 501.9 299 81.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 4.9e-140 501.5 272 87.5
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.3e-140 500.7 272 87.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 8.3e-140 500.7 297 81.5
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.1e-139 500.4 292 82.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.1e-139 500.4 273 86.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.4e-139 500.0 305 80.0
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.1e-139 498.8 299 81.3
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.1e-139 498.8 272 86.8
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 7.0e-139 497.7 303 80.5
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.2e-139 497.3 303 79.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-138 496.9 272 86.4
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.2e-138 496.9 273 85.3
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.7e-138 495.7 272 85.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.5e-138 495.0 272 85.3
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 4.5e-138 495.0 296 81.4
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 4.5e-138 495.0 302 79.8
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.9e-138 494.6 272 86.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 5.9e-138 494.6 294 80.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.0e-137 493.8 272 84.9
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.0e-137 493.8 272 84.9
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.0e-137 493.8 272 86.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.0e-137 493.8 272 84.9
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.8e-137 491.9 277 83.8
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 5.0e-137 491.5 318 76.1
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.0e-137 491.5 303 78.9
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 8.6e-137 490.7 272 84.6
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 8.6e-137 490.7 272 84.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 8.6e-137 490.7 281 82.2
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.1e-136 490.3 272 84.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.9e-136 489.6 303 77.9
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.3e-136 488.8 266 87.2
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 4.3e-136 488.4 303 78.2
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 5.6e-136 488.0 272 83.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-135 486.9 312 77.6
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.6e-135 486.5 303 78.2
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.6e-135 486.5 276 84.1
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.6e-135 486.5 271 84.1
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.0e-134 483.8 321 76.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 6.8e-134 481.1 262 87.4
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.2e-133 480.3 269 84.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.8e-131 473.0 323 72.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.4e-131 472.6 290 79.0
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 7.0e-131 471.1 300 77.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 9.2e-131 470.7 303 74.9
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.7e-129 466.5 290 79.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.3e-129 466.1 248 89.9
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.0e-129 465.7 248 90.7
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.2e-125 453.8 281 79.4
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.4e-125 451.8 272 79.8
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.6e-119 432.2 300 69.7
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.1e-118 429.1 297 73.4
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.0e-118 428.7 373 62.5
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 6.8e-118 427.9 229 91.3
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.9e-115 419.9 293 68.6
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 1.7e-113 413.3 289 72.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.7e-108 396.7 274 69.7
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.9e-108 396.0 271 73.4
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 9.2e-107 391.0 420 54.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.5e-104 382.9 234 79.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 7.6e-101 371.3 214 84.1
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 3.8e-100 369.0 203 86.7
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.7e-97 360.1 351 58.4
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 6.2e-79 298.5 224 65.2
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.1e-75 285.0 159 84.3
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.1e-38 162.9 97 76.3
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.2e-26 124.8 79 73.4
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.4e-17 94.7 57 77.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.4e-17 94.7 49 91.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-12 78.2 46 82.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.9e-12 76.6 49 75.5
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.0e-12 76.3 42 85.7
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 6.4e-07 59.3 40 72.5


User provided reference genes

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