Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.7e-191 672.5 341 100.0
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 7.2e-171 604.0 335 89.0
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.6e-170 601.7 335 89.6
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 8.0e-170 600.5 335 89.3
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.2e-168 596.7 335 88.7
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 1.5e-168 596.3 333 89.5
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 2.6e-168 595.5 335 88.4
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 2.6e-168 595.5 333 88.9
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 2.6e-168 595.5 335 87.2
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 5.7e-168 594.3 335 87.8
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 5.7e-168 594.3 335 88.4
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 7.5e-168 594.0 337 88.1
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 9.8e-168 593.6 335 88.4
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.3e-167 593.2 333 88.0
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.7e-167 592.8 334 88.3
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.8e-167 592.0 331 88.5
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 3.7e-167 591.7 338 87.6
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 6.3e-167 590.9 338 87.6
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 8.3e-167 590.5 335 87.2
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 1.1e-166 590.1 338 87.3
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 1.1e-166 590.1 335 87.2
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 1.1e-166 590.1 335 87.5
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 1.4e-166 589.7 338 87.3
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 1.4e-166 589.7 335 87.2
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.8e-166 589.3 335 87.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.4e-166 589.0 333 87.4
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 2.4e-166 589.0 340 86.8
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 3.1e-166 588.6 335 87.8
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 3.1e-166 588.6 338 87.3
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 3.1e-166 588.6 335 87.8
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 4.1e-166 588.2 335 87.8
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 4.1e-166 588.2 338 87.0
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 5.4e-166 587.8 335 88.4
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 5.4e-166 587.8 333 88.0
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 5.4e-166 587.8 335 88.4
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 5.4e-166 587.8 335 87.5
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 7.0e-166 587.4 335 87.5
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 7.0e-166 587.4 337 86.9
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 9.1e-166 587.0 339 86.1
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.2e-165 586.6 333 87.7
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.2e-165 586.6 337 86.1
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.2e-165 586.6 335 86.6
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 2.0e-165 585.9 338 87.0
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 2.0e-165 585.9 338 87.6
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 2.7e-165 585.5 335 86.9
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 2.7e-165 585.5 335 86.0
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 3.5e-165 585.1 338 87.3
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 4.5e-165 584.7 339 85.3
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 4.5e-165 584.7 335 87.2
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 4.5e-165 584.7 335 86.6
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 5.9e-165 584.3 334 88.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 333 87.1
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 333 87.1
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 333 87.1
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.9e-164 582.0 333 86.8
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 2.9e-164 582.0 330 87.3
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 3.8e-164 581.6 336 85.7
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 5.0e-164 581.3 336 85.7
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.5e-163 579.7 335 86.9
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 1.5e-163 579.7 318 90.9
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 1.5e-163 579.7 372 79.8
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 1.9e-163 579.3 333 86.2
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 1.9e-163 579.3 337 86.4
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 2.5e-163 578.9 335 86.3
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 2.5e-163 578.9 337 85.2
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 2.5e-163 578.9 337 85.2
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.5e-163 578.9 334 86.2
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 7.2e-163 577.4 333 86.5
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 9.4e-163 577.0 333 86.2
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.2e-162 576.6 335 85.1
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 1.6e-162 576.2 333 86.2
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 2.1e-162 575.9 335 86.0
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 2.7e-162 575.5 333 86.8
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 2.7e-162 575.5 333 87.1
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 3.6e-162 575.1 333 86.8
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 4.7e-162 574.7 339 84.7
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 6.1e-162 574.3 333 86.2
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.3e-161 572.4 327 86.2
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 3.0e-161 572.0 335 85.7
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 3.0e-161 572.0 358 81.6
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 5.2e-161 571.2 334 84.4
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 5.2e-161 571.2 320 87.2
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 2.6e-160 568.9 333 83.2
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 2.6e-160 568.9 324 86.7
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 9.8e-160 567.0 315 90.2
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 9.8e-160 567.0 335 83.9
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 9.8e-160 567.0 324 86.7
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 3.7e-159 565.1 333 83.2
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.1e-158 563.5 331 85.2
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 3.1e-158 562.0 335 83.3
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 7.0e-158 560.8 334 84.7
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.2e-157 560.1 333 81.7
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.0e-157 559.3 335 83.3
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.0e-157 559.3 335 83.3
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 6.6e-156 554.3 337 81.6
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 8.6e-156 553.9 335 82.4
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 1.1e-155 553.5 352 81.0
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 1.5e-155 553.1 337 81.3
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.2e-154 550.1 335 81.8
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.6e-154 549.7 341 80.6
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 3.6e-154 548.5 362 78.5
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 7.5e-152 540.8 341 78.6
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.7e-151 539.7 396 73.0
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 2.2e-151 539.3 320 80.9
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.9e-151 538.9 324 82.7
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 1.6e-149 533.1 333 78.1
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 4.3e-147 525.0 328 79.3
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 2.8e-146 522.3 335 75.5
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 8.9e-145 517.3 335 79.4
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 8.9e-145 517.3 333 76.3
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 1.5e-144 516.5 333 76.0
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 2.9e-143 512.3 333 76.0
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 6.4e-143 511.1 339 73.7
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 5.0e-140 501.5 337 74.5
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.1e-137 493.8 313 76.7
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 2.6e-136 489.2 328 72.9
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 1.0e-132 477.2 327 71.6
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 1.3e-119 433.7 340 66.8
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 2.2e-119 433.0 317 67.5
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 6.0e-117 424.9 335 68.1
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 2.3e-116 422.9 239 87.0
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 1.4e-113 413.7 248 82.3
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 6.9e-113 411.4 245 84.5
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 9.0e-113 411.0 249 81.9
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 2.7e-109 399.4 254 79.1
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 3.0e-108 396.0 208 94.7
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 2.8e-106 389.4 324 65.1
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 2.7e-101 372.9 225 81.8
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 2.5e-99 366.3 216 83.3
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 3.7e-98 362.5 213 83.6
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.4e-94 350.5 194 88.7
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 1.6e-93 347.1 307 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 1.6e-90 337.0 213 78.4
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.7e-87 327.0 187 84.5
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 4.6e-85 318.9 332 52.7
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 3.2e-78 296.2 242 62.0
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.5e-75 287.3 171 82.5
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-74 284.3 195 68.7
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.0e-63 245.7 135 91.9
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 2.4e-57 226.9 141 78.0
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 2.0e-51 207.2 155 65.2
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 6.3e-50 202.2 147 68.7
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 8.0e-45 185.3 148 68.2
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 1.6e-40 171.0 87 94.3
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 6.4e-34 149.1 82 87.8
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 1.4e-33 147.9 101 78.2
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 7.8e-32 142.1 98 71.4
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 1.3e-31 141.4 87 80.5
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 6.6e-31 139.0 100 71.0
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.9e-30 137.5 73 89.0
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 5.6e-30 136.0 79 82.3
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 6.0e-24 115.9 130 48.5
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 5.6e-22 109.4 124 57.3
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 7.3e-22 109.0 127 53.5
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 5.8e-19 99.4 283 29.7
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.9e-18 96.3 104 51.9
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 5.4e-17 92.8 266 32.0
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 6.0e-16 89.4 315 26.7
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 6.0e-16 89.4 234 28.2
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 2.3e-15 87.4 74 60.8
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.5e-14 84.7 281 28.5
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.6e-14 82.8 73 58.9
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.2e-10 70.9 53 71.7
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.9e-10 70.5 103 44.7
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 4.9e-10 69.7 247 26.3
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 4.6e-08 63.2 45 68.9
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 7.3e-06 55.8 42 64.3


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