Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 0.0e+00 1526.9 857 100.0
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 0.0e+00 1094.0 912 71.9
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 2.8e-193 679.9 760 50.9
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 2.4e-192 676.8 761 51.8
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 4.1e-192 676.0 760 51.2
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 4.1e-192 676.0 768 50.9
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.2e-189 666.4 869 46.3
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.2e-188 664.5 891 45.9
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.6e-188 664.1 726 51.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.6e-188 662.9 724 50.4
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.8e-187 660.6 746 49.7
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 3.0e-187 659.8 752 49.1
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 3.9e-187 659.4 821 48.7
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 3.9e-187 659.4 882 52.2
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 8.8e-187 658.3 785 48.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.5e-186 657.5 761 50.1
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 2.6e-186 656.8 719 51.5
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 2.6e-186 656.8 773 49.5
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 7.4e-186 655.2 783 48.8
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 9.7e-186 654.8 722 50.3
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.7e-185 654.1 770 48.3
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.7e-185 654.1 737 50.1
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 1.7e-185 654.1 751 48.3
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 2.2e-185 653.7 769 48.5
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 2.8e-185 653.3 743 50.2
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 4.8e-185 652.5 722 49.9
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 6.3e-185 652.1 725 50.9
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 2.4e-184 650.2 751 48.6
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 2.4e-184 650.2 729 50.9
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.4e-184 650.2 722 50.6
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 2.4e-184 650.2 740 50.7
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 3.1e-184 649.8 758 49.9
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 4.1e-184 649.4 746 49.1
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 7.0e-184 648.7 719 50.3
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.2e-183 647.9 740 49.7
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.2e-183 647.9 755 48.5
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.2e-183 647.9 787 46.9
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.5e-183 647.5 729 51.0
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 2.0e-183 647.1 771 49.2
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.6e-183 646.7 742 48.4
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 5.9e-183 645.6 714 51.7
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 1.0e-182 644.8 725 50.8
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.0e-182 644.8 725 50.8
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 1.3e-182 644.4 768 49.1
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.2e-182 643.7 896 44.4
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 3.8e-182 642.9 883 45.3
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 8.5e-182 641.7 795 47.4
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 8.5e-182 641.7 730 50.1
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.1e-181 641.3 775 47.4
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.4e-181 641.0 772 47.2
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 2.5e-181 640.2 733 48.6
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 2.5e-181 640.2 770 47.7
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 3.2e-181 639.8 771 49.5
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 7.2e-181 638.6 758 49.2
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.6e-180 637.5 768 48.4
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.6e-180 637.5 771 49.4
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.6e-180 637.5 758 49.2
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 6.1e-180 635.6 875 49.6
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 8.0e-180 635.2 745 49.0
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.5e-178 630.9 871 45.2
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.0e-178 630.6 775 47.6
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 7.4e-178 628.6 912 43.9
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 7.4e-178 628.6 889 45.2
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.3e-177 627.9 739 49.9
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 2.8e-177 626.7 890 42.9
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 4.8e-177 625.9 761 48.2
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 7.0e-176 622.1 791 46.4
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 4.5e-175 619.4 731 47.3
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 5.9e-175 619.0 781 47.6
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 7.7e-175 618.6 736 47.3
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 7.7e-175 618.6 759 48.4
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.0e-174 618.2 766 49.1
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.3e-174 617.8 757 48.1
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 6.5e-174 615.5 723 48.3
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.5e-173 614.4 780 47.8
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.1e-172 610.5 734 47.8
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 7.5e-170 602.1 726 47.1
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.7e-169 600.9 771 48.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 6.3e-169 599.0 740 48.6
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 8.3e-169 598.6 761 47.8
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.1e-168 598.2 761 44.9
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.1e-168 598.2 700 49.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 9.1e-168 595.1 887 46.6
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.0e-167 594.0 825 43.6
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 1.3e-166 591.3 725 48.3
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 1.6e-164 584.3 774 44.3
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.7e-164 583.6 866 43.1
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 5.9e-159 565.8 739 47.0
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 3.7e-145 520.0 740 42.0
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 3.2e-144 516.9 646 47.4
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 5.0e-142 509.6 636 49.4
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 2.6e-138 497.3 592 46.6
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.4e-136 490.7 770 41.2
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 3.6e-124 450.3 406 56.4
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.2e-119 435.3 408 54.4
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 4.8e-116 423.3 883 34.5
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.8e-115 421.4 396 54.8
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.4e-112 411.8 540 45.7
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 8.7e-110 402.5 742 38.4
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 3.1e-99 367.5 656 37.0
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 4.2e-96 357.1 513 44.1
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 1.0e-89 335.9 404 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 6.1e-87 326.6 614 34.4
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 2.2e-81 308.1 726 33.1
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 2.9e-81 307.8 645 33.6
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 7.2e-72 276.6 493 38.7
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.5e-69 268.9 1031 27.2
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 8.2e-68 263.1 221 60.6
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 9.1e-59 233.0 192 60.9
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.0e-57 229.6 327 47.1
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.9e-40 172.2 132 66.7
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.4e-38 166.0 125 66.4
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 1.2e-29 136.3 232 37.5
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.7e-20 105.9 191 39.8
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 6.6e-17 94.0 177 39.0
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.9e-16 92.4 66 59.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.8e-15 88.6 119 45.4
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 3.6e-15 88.2 558 21.0
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 4.1e-11 74.7 96 45.8
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 5.1e-09 67.8 86 43.0
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 5.1e-09 67.8 86 43.0
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 1.2e-07 63.2 59 57.6
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.2e-07 63.2 61 52.5


User provided reference genes

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