Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0184100 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 1.1e-119 433.3 213 100.0
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 4.7e-51 205.3 162 64.8
Os10g0389500 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 2.1e-35 153.3 190 46.8
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 2.1e-19 100.1 212 38.2
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 8.0e-19 98.2 231 30.3
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 3.1e-18 96.3 177 37.3
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 8.9e-18 94.7 212 32.5
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 1.5e-17 94.0 206 33.0
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.3e-16 90.9 213 35.2
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 1.7e-16 90.5 192 34.9
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 2.2e-16 90.1 186 36.6
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 2.9e-16 89.7 166 36.1
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 2.9e-16 89.7 208 35.1
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 6.4e-16 88.6 174 33.9
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 8.3e-16 88.2 222 33.3
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.1e-15 87.8 187 34.2
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.4e-15 86.7 191 31.4
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 3.2e-15 86.3 206 32.5
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 3.2e-15 86.3 172 36.0
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 5.4e-15 85.5 235 34.0
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 7.0e-15 85.1 208 33.7
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 9.2e-15 84.7 208 32.7
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.2e-14 84.3 223 30.5
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 1.2e-14 84.3 211 29.9
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.7e-14 83.2 209 31.6
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 2.7e-14 83.2 208 29.3
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 3.5e-14 82.8 201 30.3
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 3.5e-14 82.8 201 30.3
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 3.5e-14 82.8 202 32.7
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 4.6e-14 82.4 208 31.7
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 6.0e-14 82.0 203 31.5
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 6.0e-14 82.0 195 34.4
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 1.7e-13 80.5 205 32.2
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.7e-13 80.5 193 31.1
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.7e-13 80.5 203 34.0
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 3.0e-13 79.7 208 32.7
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 3.0e-13 79.7 185 32.4
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 3.0e-13 79.7 206 29.6
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 3.9e-13 79.3 208 29.3
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 3.9e-13 79.3 194 32.5
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 6.6e-13 78.6 216 29.2
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 6.6e-13 78.6 201 35.3
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 6.6e-13 78.6 197 31.5
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 6.6e-13 78.6 197 31.5
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 8.6e-13 78.2 195 31.8
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.1e-12 77.8 204 33.8
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.1e-12 77.8 206 28.2
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 1.1e-12 77.8 206 31.6
Zm00001eb027960 Zea mays HOM05D003792 ORTHO05D003195 1.1e-12 77.8 185 33.5
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.5e-12 77.4 215 31.2
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 2.5e-12 76.6 191 28.3
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 2.5e-12 76.6 198 27.8
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 3.3e-12 76.3 178 32.6
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 3.3e-12 76.3 171 32.7
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 5.6e-12 75.5 213 31.5
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 7.3e-12 75.1 197 32.5
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 7.3e-12 75.1 164 34.1
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 7.3e-12 75.1 202 33.7
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 7.3e-12 75.1 205 31.2
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.6e-11 73.9 221 28.1
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.6e-11 73.9 173 32.4
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.1e-11 73.6 208 32.7
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 2.8e-11 73.2 201 32.3
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 2.8e-11 73.2 206 32.0
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 2.8e-11 73.2 194 30.9
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 2.8e-11 73.2 188 31.4
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 2.8e-11 73.2 213 31.5
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 2.8e-11 73.2 213 31.5
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.8e-11 73.2 197 32.0
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 3.6e-11 72.8 182 30.8
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.7e-11 72.4 151 34.4
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 6.2e-11 72.0 209 27.3
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 6.2e-11 72.0 189 31.7
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 1.1e-10 71.2 182 31.3
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.1e-10 71.2 223 30.0
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 1.4e-10 70.9 198 31.8
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.8e-10 70.5 191 31.9
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.8e-10 70.5 251 25.9
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 2.3e-10 70.1 213 26.8
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 2.3e-10 70.1 203 31.5
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.3e-10 70.1 185 28.6
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 3.1e-10 69.7 145 29.7
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.1e-10 69.7 169 31.4
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 3.1e-10 69.7 209 30.6
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 4.0e-10 69.3 205 31.2
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 4.0e-10 69.3 194 30.9
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 4.0e-10 69.3 203 27.6
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.0e-10 69.3 151 33.8
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 4.0e-10 69.3 220 27.7
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 4.0e-10 69.3 214 30.4
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 4.0e-10 69.3 209 30.1
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 4.0e-10 69.3 194 32.0
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 5.2e-10 68.9 183 31.1
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 6.8e-10 68.6 189 31.7
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 6.8e-10 68.6 180 28.9
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 6.8e-10 68.6 180 29.4
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 6.8e-10 68.6 103 36.9
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 6.8e-10 68.6 97 39.2
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 8.9e-10 68.2 201 31.3
SEGI_08793 Sequoiadendron giganteum HOM05D019663 ORTHO05D003195 8.9e-10 68.2 138 31.2
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.5e-09 67.4 192 29.2
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.5e-09 67.4 198 25.8
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 2.0e-09 67.0 199 32.7
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 2.0e-09 67.0 199 32.7
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 2.0e-09 67.0 198 28.3
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 2.6e-09 66.6 204 31.9
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 2.6e-09 66.6 182 31.3
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 2.6e-09 66.6 204 31.9
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 2.6e-09 66.6 188 30.9
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 3.4e-09 66.2 199 32.7
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 3.4e-09 66.2 184 28.3
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 3.4e-09 66.2 206 30.6
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 4.4e-09 65.9 215 30.2
BcaC06g31740 Brassica carinata HOM05D003792 ORTHO05D003195 9.8e-09 64.7 188 29.8
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 9.8e-09 64.7 169 32.5
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 1.3e-08 64.3 220 27.3
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 1.3e-08 64.3 208 28.4
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 1.3e-08 64.3 184 35.3
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 1.3e-08 64.3 116 37.1
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.7e-08 63.9 201 26.9
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 4.9e-08 62.4 195 27.7
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.4e-08 62.0 177 28.2
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 6.4e-08 62.0 196 27.6
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 8.3e-08 61.6 193 29.5
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 1.1e-07 61.2 207 27.1
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 1.4e-07 60.8 173 28.3
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 2.4e-07 60.1 191 28.3
CARHR181240 Cardamine hirsuta HOM05D003792 ORTHO05D003195 4.1e-07 59.3 194 30.9
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 2.1e-06 57.0 189 29.6
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 2.1e-06 57.0 197 29.4
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 2.7e-06 56.6 183 26.8
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 3.5e-06 56.2 197 30.5
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 4.6e-06 55.8 189 25.4
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 6.0e-06 55.5 191 28.3


User provided reference genes

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