Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0669700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 4.2e-110 401.4 202 100.0
Os04g0689700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 1.4e-81 306.6 200 76.0
Os09g0111800 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.0e-80 302.8 200 76.0
Zm00001eb076310 Zea mays HOM05D003838 ORTHO05D004444 4.9e-66 255.0 198 66.7
Zm00001eb076930 Zea mays HOM05D003838 ORTHO05D004444 1.1e-65 253.8 198 66.2
Os07g0256200 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.7e-40 169.5 175 49.1
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 4.6e-40 168.7 206 44.7
Zm00001eb304590 Zea mays HOM05D003838 ORTHO05D004444 1.3e-39 167.2 195 45.1
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.1e-38 164.1 200 47.5
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 2.5e-38 162.9 193 46.1
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 2.5e-38 162.9 203 43.3
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 4.3e-38 162.2 198 43.9
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 5.6e-38 161.8 194 45.9
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 1.6e-37 160.2 193 46.6
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 2.8e-37 159.5 199 46.2
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 2.8e-37 159.5 196 45.9
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 8.1e-37 157.9 193 44.6
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 1.1e-36 157.5 197 44.2
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 1.4e-36 157.1 200 43.5
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 1.4e-36 157.1 193 44.0
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 1.8e-36 156.8 204 44.1
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 1.8e-36 156.8 183 45.9
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 2.4e-36 156.4 193 43.5
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 2.4e-36 156.4 183 46.4
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 5.3e-36 155.2 203 41.9
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 5.3e-36 155.2 197 42.6
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 1.2e-35 154.1 198 44.4
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 2.0e-35 153.3 191 46.6
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 2.0e-35 153.3 194 44.8
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 2.0e-35 153.3 193 43.5
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 2.6e-35 152.9 197 41.6
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 2.6e-35 152.9 190 43.7
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 3.4e-35 152.5 193 44.0
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 4.4e-35 152.1 199 42.2
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 5.8e-35 151.8 203 43.8
Nn5g28129 Nelumbo nucifera HOM05D003838 ORTHO05D004444 5.8e-35 151.8 192 45.3
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 5.8e-35 151.8 193 43.5
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 7.6e-35 151.4 198 42.9
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 9.9e-35 151.0 190 44.2
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.7e-34 150.2 199 42.2
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 1.7e-34 150.2 192 42.7
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 2.2e-34 149.8 193 43.5
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 2.2e-34 149.8 194 45.9
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 2.9e-34 149.4 195 42.6
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.8e-34 149.1 198 42.4
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 3.8e-34 149.1 198 41.4
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 3.8e-34 149.1 199 40.7
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 4.9e-34 148.7 188 44.7
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 4.9e-34 148.7 196 41.8
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 4.9e-34 148.7 192 42.7
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 6.4e-34 148.3 198 42.9
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 8.4e-34 147.9 198 42.9
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 8.4e-34 147.9 199 39.7
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.1e-33 147.5 197 42.1
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 1.1e-33 147.5 198 41.9
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 1.1e-33 147.5 192 42.7
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 1.4e-33 147.1 190 44.7
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 1.9e-33 146.7 194 41.8
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 2.4e-33 146.4 200 42.0
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 2.4e-33 146.4 196 43.9
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 2.4e-33 146.4 196 43.9
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 4.2e-33 145.6 196 43.9
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 5.4e-33 145.2 196 38.3
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 5.4e-33 145.2 196 38.3
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 5.4e-33 145.2 198 41.9
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 5.4e-33 145.2 190 44.2
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 7.1e-33 144.8 189 42.3
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 1.2e-32 144.1 194 38.7
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 1.2e-32 144.1 193 43.0
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 1.6e-32 143.7 189 41.8
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 1.6e-32 143.7 199 41.2
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 1.6e-32 143.7 187 39.0
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 2.1e-32 143.3 194 38.7
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 2.7e-32 142.9 196 41.3
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 3.5e-32 142.5 200 42.0
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 3.5e-32 142.5 200 42.0
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 3.5e-32 142.5 199 40.2
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 4.6e-32 142.1 194 40.2
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 4.6e-32 142.1 196 41.8
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 4.6e-32 142.1 194 43.8
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 6.0e-32 141.7 201 41.8
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 7.8e-32 141.4 190 41.1
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 7.8e-32 141.4 198 40.4
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 1.0e-31 141.0 180 42.8
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 1.0e-31 141.0 200 41.0
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 1.3e-31 140.6 195 41.0
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 1.3e-31 140.6 200 42.0
HPP92_001929 Vanilla planifolia HOM05D003838 ORTHO05D004444 1.3e-31 140.6 199 40.2
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 1.7e-31 140.2 171 46.8
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 1.7e-31 140.2 200 42.0
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 1.7e-31 140.2 193 40.4
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 2.3e-31 139.8 191 40.8
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 2.3e-31 139.8 176 42.6
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 3.0e-31 139.4 190 42.1
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 3.9e-31 139.0 194 41.8
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 5.1e-31 138.7 199 41.7
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 6.6e-31 138.3 241 36.9
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 8.7e-31 137.9 200 41.5
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.1e-30 137.5 197 41.1
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 1.1e-30 137.5 196 41.8
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 1.1e-30 137.5 198 41.4
TPR.G3853 Trifolium pratense HOM05D003838 ORTHO05D004444 1.1e-30 137.5 200 42.5
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 1.9e-30 136.7 197 38.1
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 1.9e-30 136.7 197 37.1
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 2.5e-30 136.3 189 42.3
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 2.5e-30 136.3 189 40.7
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 3.3e-30 136.0 190 43.7
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 5.6e-30 135.2 195 41.5
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 7.3e-30 134.8 177 41.2
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 7.3e-30 134.8 185 37.8
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 1.3e-29 134.0 195 42.1
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 2.8e-29 132.9 187 38.5
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 4.8e-29 132.1 193 39.4
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 4.8e-29 132.1 203 39.9
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 4.8e-29 132.1 167 43.7
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.8e-28 130.2 187 38.5
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 2.4e-28 129.8 194 38.7
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 3.1e-28 129.4 193 38.9
Lj5P157T23 Lonicera japonica HOM05D003838 ORTHO05D004444 4.0e-28 129.0 149 44.3
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 9.0e-28 127.9 191 39.3
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 1.2e-27 127.5 195 41.5
arahy.Tifrunner.gnm1.ann1.IZ4F9K Arachis hypogaea HOM05D003838 ORTHO05D004444 1.5e-27 127.1 197 41.1
Gohir.D10G129400 Gossypium hirsutum HOM05D003838 ORTHO05D004444 2.0e-27 126.7 144 45.1
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 3.4e-27 125.9 199 37.7
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 7.6e-27 124.8 170 40.0
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 9.9e-27 124.4 187 36.4
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 1.7e-26 123.6 202 38.1
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 3.8e-26 122.5 157 42.0
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 3.8e-26 122.5 190 37.4
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 4.9e-26 122.1 196 35.2
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 8.4e-26 121.3 190 36.8
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 8.4e-26 121.3 188 39.9
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 8.4e-26 121.3 189 40.7
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 8.4e-26 121.3 173 40.5
EL10As5g23534 Beta vulgaris HOM05D003838 ORTHO05D004444 1.1e-25 120.9 195 38.5
CDE08G0678 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.1e-25 120.9 129 48.1
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 1.4e-25 120.6 188 41.0
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 1.9e-25 120.2 189 39.7
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 3.2e-25 119.4 189 40.2
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 7.1e-25 118.2 166 42.2
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 9.3e-25 117.9 189 37.6
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 2.7e-24 116.3 177 40.7
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 2.7e-24 116.3 189 39.2
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 4.6e-24 115.5 190 39.5
unitig_750.g28470 Utricularia gibba HOM05D003838 ORTHO05D004444 4.6e-24 115.5 187 39.6
ATR0665G008 Amborella trichopoda HOM05D003838 ORTHO05D004444 6.0e-24 115.2 151 39.1
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 6.0e-24 115.2 189 38.6
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 7.9e-24 114.8 189 38.1
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 1.3e-23 114.0 196 35.2
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 1.1e-22 110.9 163 41.7
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 8.1e-21 104.8 178 37.6
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 2.4e-20 103.2 197 32.5
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 6.9e-20 101.7 147 40.1
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 6.9e-20 101.7 154 39.0
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 2.9e-18 96.3 193 34.2
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.5e-17 93.2 161 38.5
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 4.6e-16 89.0 135 39.3
Rhsim12G0057800 Rhododendron simsii HOM05D003838 ORTHO05D004444 4.6e-16 89.0 91 47.3
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 2.3e-15 86.7 127 35.4
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 3.0e-15 86.3 154 36.4
vmacro04174 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 3.9e-15 85.9 152 35.5
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 5.1e-15 85.5 204 29.9
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.8e-13 79.7 183 30.6
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 3.1e-12 76.3 115 38.3
MD16G1210800 Malus domestica HOM05D003838 ORTHO05D004444 1.2e-11 74.3 107 39.3
Rhsim12G0009000 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.9e-10 69.7 194 27.3
CBR_g31525 Chara braunii HOM05D003838 ORTHO05D004444 1.1e-09 67.8 99 33.3
Peaxi162Scf01029g00016 Petunia axillaris HOM05D003838 ORTHO05D004444 3.2e-09 66.2 86 46.5
CBR_g15988 Chara braunii HOM05D003838 ORTHO05D004444 4.6e-08 62.4 98 31.6
Pp3c10_5570 Physcomitrium patens HOM05D003838 ORTHO05D004444 6.1e-08 62.0 166 29.5


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