Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0192300 Oryza sativa ssp. japonica HOM05D003353 ORTHO05D003751 2.6e-120 435.6 260 100.0
Zm00001eb206240 Zea mays HOM05D003353 ORTHO05D003751 1.2e-37 161.0 242 52.1
HPP92_008854 Vanilla planifolia HOM05D003353 ORTHO05D003751 1.2e-16 91.3 111 44.1
CDE10G0339 Ceratophyllum demersum HOM05D003353 ORTHO05D003751 3.9e-15 86.3 114 41.2
FAN14G4206 Fragaria x ananassa HOM05D003353 ORTHO05D003751 9.5e-14 81.6 130 40.8
QL02p076799 Quercus lobata HOM05D003353 ORTHO05D003751 2.1e-13 80.5 132 39.4
ATR0691G050 Amborella trichopoda HOM05D003353 ORTHO05D003751 3.6e-13 79.7 120 40.0
FvH4_6g50560 Fragaria vesca HOM05D003353 ORTHO05D003751 3.6e-13 79.7 130 40.8
TAR629G0276 Trochodendron aralioides HOM05D003353 ORTHO05D003751 4.7e-13 79.3 122 42.6
FAN05G2549 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.4e-12 77.8 127 39.4
TWI12G0214 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 1.4e-12 77.8 111 36.9
MELO3C009946.2 Cucumis melo HOM05D003353 ORTHO05D003751 1.8e-12 77.4 113 40.7
CsaV3_3G042270 Cucumis sativus L. HOM05D003353 ORTHO05D003751 1.8e-12 77.4 113 40.7
FAN02G2799 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.8e-12 77.4 119 41.2
ClCG10G014330 Citrullus lanatus HOM05D003353 ORTHO05D003751 3.1e-12 76.6 113 39.8
Glyma.13G170000 Glycine max HOM05D003353 ORTHO05D003751 4.0e-12 76.3 120 40.0
Thecc.04G008000 Theobroma cacao HOM05D003353 ORTHO05D003751 5.2e-12 75.9 116 38.8
TAR371G0580 Trochodendron aralioides HOM05D003353 ORTHO05D003751 5.2e-12 75.9 122 41.0
VMungo0464G0255 Vigna mungo HOM05D003353 ORTHO05D003751 8.9e-12 75.1 121 40.5
Manes.15G182800 Manihot esculenta HOM05D003353 ORTHO05D003751 1.2e-11 74.7 118 40.7
FAN09G2719 Fragaria x ananassa HOM05D003353 ORTHO05D022659 1.5e-11 74.3 122 39.3
FAN09G4608 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.5e-11 74.3 122 39.3
Prupe.3G283100 Prunus persica HOM05D003353 ORTHO05D003751 1.5e-11 74.3 117 41.9
CANSAT64G0328 Cannabis sativa HOM05D003353 ORTHO05D003751 2.0e-11 73.9 118 36.4
CiPaw.03G037100 Carya illinoinensis HOM05D003353 ORTHO05D003751 2.0e-11 73.9 118 36.4
COL.COLO4_28936 Corchorus olitorius HOM05D003353 ORTHO05D003751 2.0e-11 73.9 116 38.8
MD09G1035200 Malus domestica HOM05D003353 ORTHO05D003751 2.0e-11 73.9 117 41.9
Nn3g16906 Nelumbo nucifera HOM05D003353 ORTHO05D003751 3.4e-11 73.2 168 34.5
Potri.017G072580 Populus trichocarpa HOM05D003353 ORTHO05D003751 7.5e-11 72.0 113 38.1
Lj2g0012220 Lotus japonicus HOM05D003353 ORTHO05D003751 1.7e-10 70.9 133 37.6
MD17G1035500 Malus domestica HOM05D003353 ORTHO05D003751 1.7e-10 70.9 117 40.2
Nn4g22812 Nelumbo nucifera HOM05D003353 ORTHO05D003751 1.7e-10 70.9 165 33.9
Rhsim10G0023100 Rhododendron simsii HOM05D003353 ORTHO05D003751 2.9e-10 70.1 103 42.7
THA.LOC104822384 Tarenaya hassleriana HOM05D003353 ORTHO05D003751 2.9e-10 70.1 113 36.3
Sed0022584 Sechium edule HOM05D003353 ORTHO05D003751 3.7e-10 69.7 101 38.6
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea HOM05D003353 ORTHO05D003751 4.9e-10 69.3 160 33.1
Glyma.19G010200 Glycine max HOM05D003353 ORTHO05D003751 4.9e-10 69.3 122 38.5
GSVIVG01032492001 Vitis vinifera HOM05D003353 ORTHO05D003751 4.9e-10 69.3 130 36.9
Atru.chr6.2192 Acer truncatum HOM05D003353 ORTHO05D003751 6.4e-10 68.9 98 38.8
Carub.0003s0064 Capsella rubella HOM05D003353 ORTHO05D003751 6.4e-10 68.9 113 37.2
Ca_04206_v3 Cicer arietinum L. HOM05D003353 ORTHO05D003751 6.4e-10 68.9 116 36.2
Phvul.004G017600 Phaseolus vulgaris HOM05D003353 ORTHO05D003751 1.1e-09 68.2 121 38.0
SHI25555 Sapria himalayana HOM05D003353 ORTHO05D003751 1.1e-09 68.2 94 39.4
BcaC09g47659 Brassica carinata HOM05D003353 ORTHO05D003751 2.4e-09 67.0 118 35.6
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 2.4e-09 67.0 118 35.6
AL3G10710 Arabidopsis lyrata HOM05D003353 ORTHO05D003751 3.2e-09 66.6 187 29.9
AT3G01460 Arabidopsis thaliana HOM05D003353 ORTHO05D003751 3.2e-09 66.6 127 33.9
BcaB04g21418 Brassica carinata HOM05D003353 ORTHO05D003751 4.1e-09 66.2 113 35.4
BNapus_Darmor_BZH_scaffold_133p00020 Brassica napus HOM05D003353 ORTHO05D003751 4.1e-09 66.2 113 37.2
BraA01t04666Z Brassica rapa HOM05D003353 ORTHO05D003751 4.1e-09 66.2 113 37.2
Cpa.g.sc215.7 Carica papaya HOM05D003353 ORTHO05D003751 4.1e-09 66.2 96 36.5
Duzib147G1510 Durio zibethinus HOM05D003353 ORTHO05D003751 4.1e-09 66.2 119 36.1
Sabra17G0060500 Salix brachista HOM05D003353 ORTHO05D003751 5.4e-09 65.9 92 38.0
CiPaw.04G024200 Carya illinoinensis HOM05D003353 ORTHO05D003751 1.2e-08 64.7 171 31.6
Thhalv10022520m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 2.1e-08 63.9 127 33.9
TWI36G0997 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 2.7e-08 63.5 153 29.4
Thhalv10019872m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 3.5e-08 63.2 108 35.2
Medtr6g007650 Medicago truncatula HOM05D003353 ORTHO05D003751 3.5e-08 63.2 120 37.5
Gohir.D09G025300 Gossypium hirsutum HOM05D003353 ORTHO05D003751 4.6e-08 62.8 108 37.0
Sc06g0001600 Simmondsia chinensis HOM05D003353 ORTHO05D003751 4.6e-08 62.8 145 33.1
Aa31LG5G10560 Aethionema arabicum HOM05D003353 ORTHO05D003751 6.0e-08 62.4 113 37.2
Aqoxy3G02993 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 6.0e-08 62.4 101 35.6
C09p75140 Brassica napus HOM05D003353 ORTHO05D003751 7.8e-08 62.0 113 36.3
BolC5t35150H Brassica oleracea HOM05D003353 ORTHO05D003751 7.8e-08 62.0 113 36.3
Lalb_Chr02g0160231 Lupinus albus HOM05D003353 ORTHO05D003751 1.0e-07 61.6 98 37.8
A05p44550 Brassica napus HOM05D003353 ORTHO05D003751 1.3e-07 61.2 127 33.9
BraA05t23202Z Brassica rapa HOM05D003353 ORTHO05D003751 1.3e-07 61.2 127 33.9
Cfa007435 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.3e-07 61.2 93 35.5
Psat1g059480 Pisum sativum HOM05D003353 ORTHO05D003751 1.3e-07 61.2 84 38.1
Gohir.A09G026000 Gossypium hirsutum HOM05D003353 ORTHO05D003751 1.7e-07 60.8 108 36.1
Gorai.006G029600 Gossypium raimondii HOM05D003353 ORTHO05D003751 2.3e-07 60.5 108 36.1
PSO063G6215 Papaver somniferum HOM05D003353 ORTHO05D003751 2.3e-07 60.5 118 33.1
Sp3g00610 Schrenkiella parvula HOM05D003353 ORTHO05D003751 2.3e-07 60.5 187 29.4
Lj7C591T5 Lonicera japonica HOM05D003353 ORTHO05D003751 3.9e-07 59.7 93 35.5
Lalb_Chr21g0319411 Lupinus albus HOM05D003353 ORTHO05D003751 5.0e-07 59.3 98 38.8
PSO832G1186 Papaver somniferum HOM05D003353 ORTHO05D003751 8.6e-07 58.5 118 32.2
Haze_14661 Corylus avellana HOM05D003353 ORTHO05D003751 1.9e-06 57.4 125 34.4
Dinv35052 Davidia involucrata HOM05D003353 ORTHO05D003751 3.3e-06 56.6 133 29.3
Carub.0001s0468 Capsella rubella HOM05D003353 ORTHO05D003751 9.5e-06 55.1 83 37.3


User provided reference genes

Program Settings