Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 0.0e+00 1644.8 975 100.0
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 5.3e-243 845.1 691 72.4
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 1.4e-126 458.4 979 38.6
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 1.7e-108 398.3 999 36.4
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.2e-95 354.8 1000 33.5
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 3.5e-93 347.4 963 35.3
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 7.3e-91 339.7 1000 33.5
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 2.1e-82 311.6 656 41.3
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 1.4e-73 282.3 1006 31.6
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.7e-71 275.4 751 37.7
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.7e-68 265.4 521 43.8
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 7.3e-67 260.0 1035 31.7
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.2e-66 259.2 960 32.7
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 8.1e-66 256.5 1040 31.8
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 1.4e-65 255.8 1016 31.4
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 4.4e-64 250.8 998 32.1
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 9.9e-64 249.6 982 31.2
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 1.1e-62 246.1 754 35.7
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 1.9e-62 245.4 748 35.4
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 3.3e-59 234.6 822 33.6
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 7.3e-59 233.4 1031 29.7
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 1.2e-58 232.6 998 29.3
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 1.7e-55 222.2 738 33.5
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 3.2e-54 218.0 689 34.3
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 7.1e-54 216.9 691 36.6
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 1.7e-52 212.2 981 29.6
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 2.3e-52 211.8 1015 28.6
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 2.3e-52 211.8 1000 27.5
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 3.0e-52 211.5 1011 29.5
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.0e-48 198.7 625 35.7
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 1.1e-46 193.0 668 31.3
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 3.2e-46 191.4 750 32.8
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 4.2e-46 191.0 991 30.1
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 2.1e-45 188.7 754 33.6
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 6.7e-44 183.7 749 31.4
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 3.3e-43 181.4 762 32.4
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 3.7e-42 177.9 652 34.0
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 4.8e-42 177.6 527 36.1
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.0e-40 172.2 735 31.3
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 4.5e-40 171.0 1021 26.2
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 2.2e-39 168.7 540 34.1
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 2.9e-39 168.3 660 34.8
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 3.2e-38 164.9 1051 27.8
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.6e-37 162.5 496 38.9
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 8.7e-36 156.8 393 40.5
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 8.7e-36 156.8 816 27.0
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 7.4e-35 153.7 743 29.1
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 3.4e-32 144.8 534 31.8
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 7.6e-32 143.7 780 30.1
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.4e-30 139.4 778 30.3
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.5e-30 138.7 314 39.8
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 4.2e-30 137.9 559 34.2
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 1.6e-29 136.0 770 30.6
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.7e-29 135.2 772 29.8
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 6.0e-29 134.0 528 32.8
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 6.0e-29 134.0 377 35.3
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.3e-28 132.1 692 31.8
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 3.0e-28 131.7 721 30.8
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 3.0e-28 131.7 709 30.6
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 3.9e-28 131.3 576 33.5
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 8.7e-28 130.2 462 32.7
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 1.9e-27 129.0 689 30.6
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.9e-27 129.0 693 32.0
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 7.4e-27 127.1 695 32.1
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 2.8e-26 125.2 528 30.7
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.4e-25 122.9 692 31.6
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.4e-25 122.9 270 46.7
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 4.1e-25 121.3 599 32.1
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 4.1e-25 121.3 657 31.7
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 5.3e-25 120.9 450 34.4
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 6.9e-25 120.6 511 30.9
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 9.0e-25 120.2 539 33.4
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 4.5e-24 117.9 767 27.0
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 4.5e-24 117.9 707 28.1
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 5.9e-24 117.5 436 34.6
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 7.7e-24 117.1 433 35.3
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.3e-23 116.3 781 27.3
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 3.8e-23 114.8 753 27.8
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 5.0e-23 114.4 537 30.2
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 6.5e-23 114.0 552 30.3
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 8.5e-23 113.6 700 28.3
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 8.5e-23 113.6 356 31.5
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 1.1e-22 113.2 505 29.5
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 3.2e-22 111.7 459 35.7
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 1.6e-21 109.4 237 40.5
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 2.1e-21 109.0 557 29.1
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 2.1e-21 109.0 557 29.1
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 2.1e-21 109.0 557 29.1
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.0e-20 105.1 368 32.3
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.0e-20 105.1 368 32.3
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 3.0e-20 105.1 506 31.2
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 1.1e-19 103.2 375 32.5
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 1.5e-19 102.8 528 28.2
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 1.5e-19 102.8 239 44.4
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 2.5e-19 102.1 518 32.8
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 3.3e-19 101.7 456 32.2
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 5.7e-19 100.9 269 34.6
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 5.7e-19 100.9 122 42.6
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 7.4e-19 100.5 477 30.2
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 1.4e-17 96.3 111 56.8
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 2.4e-17 95.5 409 35.2
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 4.1e-17 94.7 90 70.0
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 9.1e-17 93.6 436 27.8
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 1.5e-16 92.8 441 33.1
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 2.6e-16 92.0 53 77.4
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 3.4e-16 91.7 239 38.9
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 1.0e-15 90.1 114 55.3
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 2.9e-15 88.6 57 75.4
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 6.5e-15 87.4 392 31.4
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 6.5e-15 87.4 256 41.0
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 8.5e-15 87.0 631 29.8
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 7.2e-14 84.0 76 57.9
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 7.2e-14 84.0 319 37.3
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 3.6e-13 81.6 453 28.3
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 1.0e-12 80.1 110 51.8
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 3.3e-11 75.1 110 42.7
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 3.3e-11 75.1 110 42.7
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 3.3e-11 75.1 399 27.1
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 2.2e-10 72.4 130 50.0
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 4.1e-09 68.2 58 51.7
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 5.3e-09 67.8 326 27.9
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 7.0e-09 67.4 242 37.6
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 9.1e-09 67.0 92 54.3
CSS0019085 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 1.2e-08 66.6 113 39.8
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.4e-06 59.7 86 53.5
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 3.2e-06 58.5 50 62.0
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 3.2e-06 58.5 50 62.0


User provided reference genes

Program Settings