Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.3e-185 652.9 318 100.0
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 4.7e-164 581.3 319 88.7
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.1e-141 506.9 313 78.6
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 6.6e-134 481.1 301 77.1
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 2.8e-132 475.7 306 76.1
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 2.3e-131 472.6 316 72.8
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 3.4e-130 468.8 318 72.0
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.7e-129 466.5 307 74.6
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 1.1e-128 463.8 305 74.1
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 2.4e-128 462.6 314 72.6
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 5.4e-128 461.5 316 71.2
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 7.0e-128 461.1 303 73.9
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 2.0e-127 459.5 324 71.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.7e-127 459.1 311 69.8
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 1.0e-126 457.2 318 70.1
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.6e-126 454.1 304 72.7
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 4.3e-125 451.8 314 68.8
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 5.6e-125 451.4 312 71.2
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 5.6e-125 451.4 310 72.6
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 2.3e-123 446.0 306 70.9
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 5.2e-123 444.9 320 66.2
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 9.9e-122 440.7 303 69.6
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 1.7e-121 439.9 316 67.1
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.7e-121 439.9 310 68.1
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 4.9e-121 438.3 307 66.8
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.2e-120 435.6 318 66.7
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 4.1e-120 435.3 312 68.3
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 7.1e-120 434.5 306 68.3
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 9.2e-120 434.1 311 68.2
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 9.2e-120 434.1 305 68.9
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 2.7e-119 432.6 303 69.6
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 3.5e-119 432.2 308 67.2
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 3.5e-119 432.2 316 67.7
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 7.8e-119 431.0 308 66.6
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.0e-118 430.6 303 67.7
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 2.3e-118 429.5 298 69.5
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 5.1e-118 428.3 310 66.1
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 6.6e-118 427.9 312 67.0
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 6.6e-118 427.9 309 68.3
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.1e-117 427.2 311 65.0
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.1e-117 427.2 304 68.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.5e-117 426.8 307 65.8
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.5e-117 426.0 310 66.5
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 5.6e-117 424.9 309 66.7
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.6e-116 423.3 301 67.1
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.6e-116 423.3 307 67.1
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.1e-116 422.9 314 66.2
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 2.1e-116 422.9 309 66.7
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.1e-116 422.9 307 65.1
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.8e-116 422.5 307 65.5
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 3.6e-116 422.2 302 66.2
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 8.1e-116 421.0 309 66.0
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 8.1e-116 421.0 302 67.2
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 1.1e-115 420.6 314 65.6
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 1.4e-115 420.2 309 65.7
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 4.0e-115 418.7 317 65.0
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 5.2e-115 418.3 309 66.0
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 8.9e-115 417.5 304 67.1
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 1.2e-114 417.2 309 66.3
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 2.6e-114 416.0 309 65.0
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 9.9e-114 414.1 305 64.9
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 9.9e-114 414.1 309 65.7
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 2.9e-113 412.5 310 64.8
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 8.4e-113 411.0 309 65.0
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 2.1e-111 406.4 301 63.5
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 6.0e-111 404.8 309 64.1
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.3e-110 402.9 306 63.4
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 3.9e-110 402.1 313 62.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 5.1e-110 401.7 310 63.9
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 6.6e-110 401.4 326 61.0
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.5e-109 400.2 303 64.7
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.5e-109 400.2 300 65.7
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 3.3e-109 399.1 301 65.8
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.6e-109 398.3 314 62.1
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-108 397.1 315 62.5
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 6.2e-108 394.8 304 62.8
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.4e-107 393.7 304 61.8
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 4.0e-107 392.1 322 64.3
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 4.0e-107 392.1 312 62.8
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 2.7e-103 379.4 306 60.5
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 6.0e-103 378.3 314 60.5
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 8.1e-100 367.9 294 63.9
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 9.9e-98 360.9 302 57.3
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 9.6e-93 344.4 263 62.7
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.6e-92 343.6 243 70.0
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 9.9e-90 334.3 309 57.0
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 1.9e-88 330.1 232 69.0
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 8.7e-86 321.2 246 65.0
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 3.3e-85 319.3 245 64.9
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 5.8e-82 308.5 257 61.1
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 1.0e-81 307.8 423 41.1
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 4.9e-81 305.4 280 55.4
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 9.3e-80 301.2 306 52.3
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 1.5e-74 283.9 242 61.6
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.2e-73 280.0 195 68.2
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.4e-72 277.3 211 67.3
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 4.3e-69 265.8 210 66.7
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.8e-68 262.3 309 46.3
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-64 250.4 205 60.0
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.1e-63 246.9 291 47.8
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 8.8e-62 241.5 170 66.5
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.9e-57 226.5 147 75.5
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.1e-56 224.6 262 48.1
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 5.5e-56 222.2 169 62.7
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 1.0e-54 218.0 164 63.4
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 6.7e-54 215.3 133 72.9
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.1e-53 214.5 291 42.6
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.5e-53 214.2 150 69.3
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.8e-52 209.9 165 60.6
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 7.0e-51 205.3 173 57.8
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.8e-46 190.7 127 67.7
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 1.8e-46 190.7 127 67.7
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 1.8e-46 190.7 127 67.7
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.8e-44 182.6 160 58.8
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.8e-44 182.6 102 77.5
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 1.3e-41 174.5 124 70.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 8.6e-33 145.2 115 59.1
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 6.8e-30 135.6 108 62.0
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 8.0e-23 112.1 98 59.2
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.5e-21 107.8 72 70.8
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.3e-20 104.8 111 52.3
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 8.3e-20 102.1 148 42.6
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.4e-19 101.3 109 52.3
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.4e-19 101.3 109 52.3
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.9e-19 100.9 112 52.7
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 1.0e-17 95.1 153 35.9
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-17 94.0 96 55.2
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 7.3e-08 62.4 69 47.8
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 7.3e-08 62.4 68 48.5
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.7e-07 59.7 45 71.1
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.1e-07 58.9 63 54.0


User provided reference genes

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