Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 6.4e-32 140.2 74 100.0
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 5.4e-23 110.5 61 95.1
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.8e-19 98.2 63 82.5
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.4e-18 95.9 63 79.4
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.4e-18 95.1 60 81.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 2.4e-18 95.1 63 79.4
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 2.4e-18 95.1 63 77.8
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 2.4e-18 95.1 63 77.8
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 2.4e-18 95.1 62 80.6
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 4.0e-18 94.4 60 80.0
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.2e-17 92.8 57 82.5
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.2e-17 92.8 57 86.0
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.2e-17 92.8 57 86.0
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.5e-17 92.4 64 73.4
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.5e-17 92.4 57 86.0
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 2.0e-17 92.0 60 76.7
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.6e-17 91.7 57 86.0
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.6e-17 91.7 57 86.0
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.4e-17 91.3 61 78.7
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 3.4e-17 91.3 63 79.4
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 5.8e-17 90.5 61 78.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 5.8e-17 90.5 62 79.0
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 1.7e-16 89.0 56 83.9
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 3.8e-16 87.8 57 82.5
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.8e-16 87.8 66 74.2
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 6.4e-16 87.0 63 69.8
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 8.4e-16 86.7 63 74.6
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 8.4e-16 86.7 56 80.4
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.4e-15 85.1 64 76.6
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 2.4e-15 85.1 66 72.7
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 4.2e-15 84.3 71 67.6
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 4.2e-15 84.3 67 70.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 4.2e-15 84.3 66 72.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.2e-15 84.3 64 71.9
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 7.1e-15 83.6 57 80.7
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 7.1e-15 83.6 66 72.7
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 9.3e-15 83.2 54 79.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.2e-14 82.8 57 71.9
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.1e-14 82.0 60 75.0
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 2.1e-14 82.0 63 66.7
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 2.7e-14 81.6 66 71.2
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 3.5e-14 81.3 60 70.0
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.6e-14 80.9 57 77.2
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.6e-14 80.9 57 77.2
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 4.6e-14 80.9 66 71.2
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 4.6e-14 80.9 63 71.4
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 6.0e-14 80.5 58 72.4
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 7.9e-14 80.1 63 69.8
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 7.9e-14 80.1 63 69.8
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 7.9e-14 80.1 57 75.4
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.0e-13 79.7 57 77.2
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.0e-13 79.7 58 77.6
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.0e-13 79.7 64 65.6
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.3e-13 79.3 57 75.4
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.8e-13 79.0 48 83.3
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.8e-13 79.0 58 69.0
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 2.3e-13 78.6 57 75.4
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.3e-13 78.6 57 75.4
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.3e-13 78.6 60 71.7
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 3.0e-13 78.2 53 83.0
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 3.0e-13 78.2 57 73.7
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 6.7e-13 77.0 57 75.4
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 6.7e-13 77.0 57 75.4
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 6.7e-13 77.0 54 72.2
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.1e-12 76.3 53 77.4
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.5e-12 75.9 60 70.0
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.5e-12 75.9 57 73.7
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.9e-12 75.5 63 68.3
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.9e-12 75.5 63 63.5
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 2.5e-12 75.1 54 68.5
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 5.6e-12 73.9 58 67.2
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 9.6e-12 73.2 57 73.7
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 9.6e-12 73.2 60 66.7
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 9.6e-12 73.2 57 70.2
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.3e-11 72.8 80 56.2
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.6e-11 72.4 57 71.9
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.6e-11 72.4 63 66.7
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.8e-11 71.6 57 68.4
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 2.8e-11 71.6 57 68.4
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 4.8e-11 70.9 57 66.7
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 1.1e-10 69.7 57 66.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.1e-10 69.7 64 59.4
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.1e-10 69.7 57 68.4
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.4e-10 69.3 66 56.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.4e-10 69.3 49 75.5
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.8e-10 68.9 54 68.5
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.1e-10 68.2 53 73.6
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 4.0e-10 67.8 60 61.7
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 4.0e-10 67.8 54 68.5
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 4.0e-10 67.8 53 69.8
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 5.3e-10 67.4 60 61.7
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 6.9e-10 67.0 55 70.9
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 6.9e-10 67.0 49 77.6
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 9.0e-10 66.6 51 70.6
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 9.0e-10 66.6 60 60.0
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.2e-09 66.2 60 60.0
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.2e-09 66.2 57 59.6
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.5e-09 65.9 60 60.0
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 2.0e-09 65.5 60 60.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 2.6e-09 65.1 57 61.4
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 2.6e-09 65.1 57 61.4
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.6e-09 65.1 57 59.6
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 4.5e-09 64.3 49 71.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 5.8e-09 63.9 60 58.3
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 7.6e-09 63.5 54 63.0
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 7.6e-09 63.5 54 63.0
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 1.0e-08 63.2 60 56.7
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 1.3e-08 62.8 57 57.9
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-08 62.8 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.7e-08 62.4 49 65.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.7e-08 62.4 56 58.9
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-08 62.4 49 69.4
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-08 62.4 49 69.4
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.7e-08 62.4 53 64.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.9e-08 61.6 53 62.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.9e-08 61.6 53 62.3
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.9e-08 61.6 53 62.3
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 4.9e-08 60.8 54 59.3
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 4.9e-08 60.8 56 57.1
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.9e-08 60.8 37 81.1
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.1e-07 59.7 37 78.4
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.5e-07 58.5 37 78.4
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.5e-07 58.5 46 69.6
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 5.5e-07 57.4 33 84.8
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 7.1e-07 57.0 69 49.3
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 7.9e-06 53.5 36 77.8


User provided reference genes

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