Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063706.1 Olea europaea HOM05D000350 ORTHO05D000228 1.7e-102 375.9 177 100.0
Oeu034420.1 Olea europaea HOM05D000350 ORTHO05D000228 3.8e-22 109.0 146 43.8
MSTRG.11569 Avicennia marina HOM05D000350 ORTHO05D000228 1.2e-15 87.4 155 36.8
Oeu038393.1 Olea europaea HOM05D000350 ORTHO05D000228 7.6e-15 84.7 153 36.6
SalBow5G3801 Salvia bowleyana HOM05D000350 ORTHO05D000228 2.2e-14 83.2 91 48.4
SGA_v2.0_scaffold25G10723 Striga asiatica HOM05D000350 ORTHO05D000228 3.8e-14 82.4 172 35.5
unitig_22.g5318 Utricularia gibba HOM05D000350 ORTHO05D000228 5.0e-14 82.0 160 38.1
unitig_8.g3768 Utricularia gibba HOM05D000350 ORTHO05D000228 1.6e-12 77.0 161 36.6
Migut.O00286 Erythranthe guttata HOM05D000350 ORTHO05D000228 4.6e-12 75.5 159 35.8
Nitab4.5_0001089g0050 Nicotiana tabacum HOM05D000350 ORTHO05D000228 2.5e-10 69.7 172 32.6
CSS0007455 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 3.3e-10 69.3 188 31.9
CSS0030311 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 3.3e-10 69.3 188 31.9
Nitab4.5_0011777g0010 Nicotiana tabacum HOM05D000350 ORTHO05D000228 5.7e-10 68.6 172 32.0
Sopen04g004310 Solanum pennellii HOM05D000350 ORTHO05D000228 3.7e-09 65.9 163 31.9
unitig_749.g13723 Utricularia gibba HOM05D000350 ORTHO05D000228 4.8e-09 65.5 143 35.0
ClCG01G008210 Citrullus lanatus HOM05D000350 ORTHO05D000228 6.3e-09 65.1 193 32.1
Solyc04g009180.3 Solanum lycopersicum HOM05D000350 ORTHO05D000228 8.2e-09 64.7 156 32.7
MELO3C025049.2 Cucumis melo HOM05D000350 ORTHO05D000228 1.1e-08 64.3 153 33.3
DCAR_002594 Daucus carota HOM05D000350 ORTHO05D000228 1.1e-08 64.3 152 32.9
HanXRQChr17g0541411 Helianthus annuus HOM05D000350 ORTHO05D000228 1.1e-08 64.3 189 29.1
Rhsim09G0069700 Rhododendron simsii HOM05D000350 ORTHO05D000228 1.1e-08 64.3 154 32.5
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.4e-08 63.9 164 31.7
unitig_26.g10117 Utricularia gibba HOM05D000350 ORTHO05D000228 1.4e-08 63.9 145 34.5
Glyma.20G001600 Glycine max HOM05D000350 ORTHO05D000228 2.4e-08 63.2 134 36.6
Actinidia25178 Actinidia chinensis HOM05D000350 ORTHO05D000228 4.1e-08 62.4 132 34.1
Gohir.A12G133100 Gossypium hirsutum HOM05D000350 ORTHO05D000228 4.1e-08 62.4 168 31.5
Lsat_1_v5_gn_4_64660 Lactuca sativa HOM05D000350 ORTHO05D000228 5.3e-08 62.0 156 34.0
Nitab4.5_0000069g0220 Nicotiana tabacum HOM05D000350 ORTHO05D000228 5.3e-08 62.0 152 31.6
Nitab4.5_0004301g0070 Nicotiana tabacum HOM05D000350 ORTHO05D000228 5.3e-08 62.0 175 29.7
Solyc01g008230.4 Solanum lycopersicum HOM05D000350 ORTHO05D000228 5.3e-08 62.0 187 30.5
Sopen01g003750 Solanum pennellii HOM05D000350 ORTHO05D000228 5.3e-08 62.0 187 30.5
Phvul.007G015000 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 6.9e-08 61.6 166 31.9
TAR629G0849 Trochodendron aralioides HOM05D000350 ORTHO05D000228 6.9e-08 61.6 148 31.8
Phvul.003G003300 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 9.0e-08 61.2 134 36.6
TAR622G0707 Trochodendron aralioides HOM05D000350 ORTHO05D000228 9.0e-08 61.2 150 34.0
Glyma.09G284300 Glycine max HOM05D000350 ORTHO05D000228 1.2e-07 60.8 128 36.7
Glyma.09G284500 Glycine max HOM05D000350 ORTHO05D000228 1.2e-07 60.8 128 36.7
BraA10t44882Z Brassica rapa HOM05D000350 ORTHO05D000228 1.5e-07 60.5 154 34.4
DCAR_026883 Daucus carota HOM05D000350 ORTHO05D000228 1.5e-07 60.5 148 33.8
ECA246G0165 Erigeron canadensis HOM05D000350 ORTHO05D000228 1.5e-07 60.5 187 28.3
Gorai.008G147800 Gossypium raimondii HOM05D000350 ORTHO05D000228 1.5e-07 60.5 174 30.5
Lj6C716T2 Lonicera japonica HOM05D000350 ORTHO05D000228 1.5e-07 60.5 147 31.3
TAR371G1151 Trochodendron aralioides HOM05D000350 ORTHO05D000228 1.5e-07 60.5 147 34.7
ClCG02G014110 Citrullus lanatus HOM05D000350 ORTHO05D000228 2.0e-07 60.1 174 28.2
MELO3C011754.2 Cucumis melo HOM05D000350 ORTHO05D000228 2.0e-07 60.1 174 28.2
C07p44280 Brassica napus HOM05D000350 ORTHO05D000228 2.6e-07 59.7 148 34.5
BolC7t44951H Brassica oleracea HOM05D000350 ORTHO05D000228 2.6e-07 59.7 148 34.5
Duzib052G0698 Durio zibethinus HOM05D000350 ORTHO05D000228 2.6e-07 59.7 160 31.9
Gohir.D02G189100 Gossypium hirsutum HOM05D000350 ORTHO05D000228 2.6e-07 59.7 162 32.1
Gohir.D12G136600 Gossypium hirsutum HOM05D000350 ORTHO05D000228 2.6e-07 59.7 174 29.9
Gorai.005G211900 Gossypium raimondii HOM05D000350 ORTHO05D000228 2.6e-07 59.7 162 32.1
Medtr1g114380 Medicago truncatula HOM05D000350 ORTHO05D000228 2.6e-07 59.7 150 32.0
Thecc.02G156700 Theobroma cacao HOM05D000350 ORTHO05D000228 2.6e-07 59.7 163 31.3
Duzib248G0707 Durio zibethinus HOM05D000350 ORTHO05D000228 3.4e-07 59.3 160 31.9
Gohir.A03G165900 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.4e-07 59.3 163 31.9
VMungo0251G3191 Vigna mungo HOM05D000350 ORTHO05D000228 3.4e-07 59.3 134 35.8
arahy.Tifrunner.gnm1.ann1.W24P9U Arachis hypogaea HOM05D000350 ORTHO05D000228 4.5e-07 58.9 169 30.8
CDE02G4099 Ceratophyllum demersum HOM05D000350 ORTHO05D000228 4.5e-07 58.9 169 28.4
CsaV3_5G020710 Cucumis sativus L. HOM05D000350 ORTHO05D000228 4.5e-07 58.9 153 32.0
Dinv18421 Davidia involucrata HOM05D000350 ORTHO05D000228 4.5e-07 58.9 162 30.2
BcaC04g23486 Brassica carinata HOM05D000350 ORTHO05D000228 7.7e-07 58.2 151 33.1
CsaV3_5G006010 Cucumis sativus L. HOM05D000350 ORTHO05D000228 7.7e-07 58.2 175 28.0
A10p28350 Brassica napus HOM05D000350 ORTHO05D000228 1.0e-06 57.8 148 33.1
BolC9t59604H Brassica oleracea HOM05D000350 ORTHO05D000228 1.0e-06 57.8 148 33.1
CARHR190260 Cardamine hirsuta HOM05D000350 ORTHO05D000228 1.0e-06 57.8 148 31.8
COL.COLO4_33084 Corchorus olitorius HOM05D000350 ORTHO05D000228 1.0e-06 57.8 163 31.3
MELO3C025357.2 Cucumis melo HOM05D000350 ORTHO05D000228 1.3e-06 57.4 153 31.4
Lj3P847T38 Lonicera japonica HOM05D000350 ORTHO05D000228 1.3e-06 57.4 157 31.8
Atru.chr11.1115 Acer truncatum HOM05D000350 ORTHO05D000228 1.7e-06 57.0 163 31.3
Aa31LG3G18240 Aethionema arabicum HOM05D000350 ORTHO05D000228 1.7e-06 57.0 156 29.5
AL6G34540 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 1.7e-06 57.0 144 31.2
Lalb_Chr02g0143611 Lupinus albus HOM05D000350 ORTHO05D000228 3.8e-06 55.8 146 32.9
A06p34240 Brassica napus HOM05D000350 ORTHO05D000228 5.0e-06 55.5 145 31.7
C03p04240 Brassica napus HOM05D000350 ORTHO05D000228 5.0e-06 55.5 151 32.5
BolC3t12956H Brassica oleracea HOM05D000350 ORTHO05D000228 5.0e-06 55.5 151 32.5
BraA06t26356Z Brassica rapa HOM05D000350 ORTHO05D000228 5.0e-06 55.5 145 31.7
Duzib132G0755 Durio zibethinus HOM05D000350 ORTHO05D000228 5.0e-06 55.5 164 30.5
Lsat_1_v5_gn_3_36601 Lactuca sativa HOM05D000350 ORTHO05D000228 5.0e-06 55.5 156 30.1
MBI06_g27501_MAGBIO Magnolia biondii HOM05D000350 ORTHO05D000228 5.0e-06 55.5 152 31.6
Peaxi162Scf00681g00014 Petunia axillaris HOM05D000350 ORTHO05D000228 5.0e-06 55.5 71 43.7
Sp2g23870 Schrenkiella parvula HOM05D000350 ORTHO05D000228 5.0e-06 55.5 158 30.4
Sed0018768 Sechium edule HOM05D000350 ORTHO05D000228 5.0e-06 55.5 146 30.8
AT5G23280 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 6.5e-06 55.1 142 33.1
Peaxi162Scf00021g00213 Petunia axillaris HOM05D000350 ORTHO05D000228 6.5e-06 55.1 147 29.9
Sp6g34620 Schrenkiella parvula HOM05D000350 ORTHO05D000228 6.5e-06 55.1 157 31.2


User provided reference genes

Program Settings