Gene: AT5G23280
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G23280
- Transcript Identifier AT5G23280.1
- Gene Type Coding gene
- Location Chr5 : 7843017-7843769 : positive
Gene Family Information
- ID HOM05D000350
- #Genes/#Species 1350/95
- Phylogenetic origin
- ID ORTHO05D000228
- #Genes/#Species 1338/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G23280.1
- Alias AtTCP7,TCP7,TCP domain protein 7
- uniprot Q9FMX2
Descriptions
- Description TCP family transcription factor
- Computational description TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0042752 | IBA | Gene Ontology | regulation of circadian rhythm | 2 |
| GO:0045893 | IEA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:2000024 | ISO | PLAZA Integrative Orthology | regulation of leaf development | Solyc04g009180.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 1 2 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0001216 | IDA | Gene Ontology | DNA-binding transcription activator activity | 4 |
| GO:0043565 | IPI IBA | Gene Ontology | sequence-specific DNA binding | 2 4 |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |