Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063225.2 Olea europaea HOM05D000393 ORTHO05D292740 3.4e-29 131.0 64 100.0
Oeu024184.1 Olea europaea HOM05D000393 ORTHO05D000275 4.0e-22 107.5 64 85.9
Oeu024185.1 Olea europaea HOM05D000393 ORTHO05D000275 4.0e-22 107.5 64 85.9
MSTRG.20702 Avicennia marina HOM05D000393 ORTHO05D000275 2.6e-13 78.2 67 67.2
MSTRG.17140 Avicennia marina HOM05D000393 ORTHO05D000275 1.3e-12 75.9 64 59.4
Nitab4.5_0003553g0130 Nicotiana tabacum HOM05D000393 ORTHO05D000275 4.1e-11 70.9 66 59.1
Solyc01g090460.3 Solanum lycopersicum HOM05D000393 ORTHO05D000275 4.1e-11 70.9 62 59.7
Dinv44075 Davidia involucrata HOM05D000393 ORTHO05D000275 7.0e-11 70.1 78 48.7
PGSC0003DMG400025984 Solanum tuberosum HOM05D000393 ORTHO05D000275 7.0e-11 70.1 64 60.9
unitig_0.g1323 Utricularia gibba HOM05D000393 ORTHO05D000275 9.2e-11 69.7 64 65.6
Peaxi162Scf00030g00519 Petunia axillaris HOM05D000393 ORTHO05D000275 1.2e-10 69.3 72 50.0
Sopen01g036250 Solanum pennellii HOM05D000393 ORTHO05D000275 3.5e-10 67.8 62 56.5
TAR374G1705 Trochodendron aralioides HOM05D000393 ORTHO05D000275 4.6e-10 67.4 65 60.0
Nitab4.5_0002874g0030 Nicotiana tabacum HOM05D000393 ORTHO05D000275 7.8e-10 66.6 71 52.1
TAR093G0002 Trochodendron aralioides HOM05D000393 ORTHO05D000275 1.7e-09 65.5 73 53.4
Duzib205G0243 Durio zibethinus HOM05D000393 ORTHO05D000275 3.0e-09 64.7 67 55.2
Lj2A225T46 Lonicera japonica HOM05D000393 ORTHO05D000275 3.0e-09 64.7 70 51.4
ClCG10G002510 Citrullus lanatus HOM05D000393 ORTHO05D000275 3.9e-09 64.3 64 56.2
Ciclev10021374m.g Citrus clementina HOM05D000393 ORTHO05D000275 3.9e-09 64.3 71 56.3
Lj4g0003446 Lotus japonicus HOM05D000393 ORTHO05D000275 3.9e-09 64.3 63 54.0
Nn6g33851 Nelumbo nucifera HOM05D000393 ORTHO05D000275 5.0e-09 63.9 74 52.7
Thecc.03G246900 Theobroma cacao HOM05D000393 ORTHO05D000275 6.6e-09 63.5 67 55.2
Lalb_Chr13g0290491 Lupinus albus HOM05D000393 ORTHO05D000275 8.6e-09 63.2 63 50.8
COL.COLO4_37107 Corchorus olitorius HOM05D000393 ORTHO05D000275 1.5e-08 62.4 68 54.4
Glyma.07G112400 Glycine max HOM05D000393 ORTHO05D000275 1.5e-08 62.4 60 56.7
GSVIVG01005821001 Vitis vinifera HOM05D000393 ORTHO05D000275 1.5e-08 62.4 66 53.0
Oeu021608.1 Olea europaea HOM05D000393 ORTHO05D000275 1.9e-08 62.0 44 68.2
Oeu021609.1 Olea europaea HOM05D000393 ORTHO05D000275 1.9e-08 62.0 44 68.2
Phvul.002G056300 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 1.9e-08 62.0 69 56.5
Lalb_Chr07g0195531 Lupinus albus HOM05D000393 ORTHO05D000275 2.5e-08 61.6 68 51.5
Gorai.N024800 Gossypium raimondii HOM05D000393 ORTHO05D000275 3.3e-08 61.2 60 50.0
Glyma.03G114300 Glycine max HOM05D000393 ORTHO05D000275 4.3e-08 60.8 60 58.3
QL12p011163 Quercus lobata HOM05D000393 ORTHO05D000275 4.3e-08 60.8 62 51.6
Duzib084G1196 Durio zibethinus HOM05D000393 ORTHO05D000275 5.6e-08 60.5 67 52.2
Oeu028309.1 Olea europaea HOM05D000393 ORTHO05D000275 5.6e-08 60.5 72 52.8
Glyma.05G062700 Glycine max HOM05D000393 ORTHO05D000275 7.3e-08 60.1 62 59.7
Gohir.A11G076500 Gossypium hirsutum HOM05D000393 ORTHO05D000275 7.3e-08 60.1 49 55.1
CSS0045404 Camellia sinensis var. sinensis HOM05D000393 ORTHO05D000275 9.5e-08 59.7 61 55.7
MELO3C013923.2 Cucumis melo HOM05D000393 ORTHO05D000275 9.5e-08 59.7 71 53.5
Dinv39177 Davidia involucrata HOM05D000393 ORTHO05D000275 9.5e-08 59.7 69 49.3
Gohir.D11G080800 Gossypium hirsutum HOM05D000393 ORTHO05D000275 9.5e-08 59.7 49 55.1
Gohir.D11G081000 Gossypium hirsutum HOM05D000393 ORTHO05D000275 9.5e-08 59.7 49 55.1
Gorai.007G086700 Gossypium raimondii HOM05D000393 ORTHO05D000275 9.5e-08 59.7 49 55.1
SGA_v2.0_scaffold52G19214 Striga asiatica HOM05D000393 ORTHO05D000275 9.5e-08 59.7 63 54.0
TPR.G29094 Trifolium pratense HOM05D000393 ORTHO05D000275 9.5e-08 59.7 66 50.0
arahy.Tifrunner.gnm1.ann1.XFR3BT Arachis hypogaea HOM05D000393 ORTHO05D000275 1.2e-07 59.3 69 50.7
Gorai.007G086600 Gossypium raimondii HOM05D000393 ORTHO05D000275 1.2e-07 59.3 49 53.1
Phvul.010G052200 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 1.2e-07 59.3 64 54.7
QL04p030937 Quercus lobata HOM05D000393 ORTHO05D000275 1.2e-07 59.3 71 50.7
VMungo0331G1160 Vigna mungo HOM05D000393 ORTHO05D000275 1.2e-07 59.3 58 55.2
arahy.Tifrunner.gnm1.ann1.899DFR Arachis hypogaea HOM05D000393 ORTHO05D000275 2.1e-07 58.5 69 49.3
Gohir.A08G167600 Gossypium hirsutum HOM05D000393 ORTHO05D000275 2.1e-07 58.5 67 52.2
Gohir.A12G096400 Gossypium hirsutum HOM05D000393 ORTHO05D000275 2.1e-07 58.5 65 52.3
Gohir.D12G099200 Gossypium hirsutum HOM05D000393 ORTHO05D000275 2.1e-07 58.5 65 52.3
Gorai.008G107900 Gossypium raimondii HOM05D000393 ORTHO05D000275 2.1e-07 58.5 65 52.3
Lj3g0021609 Lotus japonicus HOM05D000393 ORTHO05D000275 2.1e-07 58.5 59 54.2
Medtr5g013010 Medicago truncatula HOM05D000393 ORTHO05D000275 2.1e-07 58.5 55 60.0
Prupe.2G127300 Prunus persica HOM05D000393 ORTHO05D000275 2.1e-07 58.5 76 47.4
Sabra14G0032900 Salix brachista HOM05D000393 ORTHO05D000275 2.1e-07 58.5 70 48.6
arahy.Tifrunner.gnm1.ann1.L2HUY0 Arachis hypogaea HOM05D000393 ORTHO05D000275 2.8e-07 58.2 54 61.1
arahy.Tifrunner.gnm1.ann1.WNIN40 Arachis hypogaea HOM05D000393 ORTHO05D000275 2.8e-07 58.2 54 61.1
Ca_14054_v3 Cicer arietinum L. HOM05D000393 ORTHO05D000275 2.8e-07 58.2 58 55.2
Sabra01G0124700 Salix brachista HOM05D000393 ORTHO05D000275 2.8e-07 58.2 70 48.6
Sc01g0008240 Simmondsia chinensis HOM05D000393 ORTHO05D000275 2.8e-07 58.2 67 50.7
Duzib068G0361 Durio zibethinus HOM05D000393 ORTHO05D000275 3.6e-07 57.8 67 52.2
Duzib138G0517 Durio zibethinus HOM05D000393 ORTHO05D000275 3.6e-07 57.8 78 48.7
Lj2g0015204 Lotus japonicus HOM05D000393 ORTHO05D000275 3.6e-07 57.8 69 50.7
CANSAT21G2624 Cannabis sativa HOM05D000393 ORTHO05D000275 4.7e-07 57.4 72 47.2
Ca_24589_v3 Cicer arietinum L. HOM05D000393 ORTHO05D000275 4.7e-07 57.4 68 47.1
CsaV3_3G002540 Cucumis sativus L. HOM05D000393 ORTHO05D000275 4.7e-07 57.4 74 47.3
Phvul.003G223200 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 4.7e-07 57.4 61 52.5
TWI59G0896 Tripterygium wilfordii HOM05D000393 ORTHO05D000275 4.7e-07 57.4 72 47.2
CiPaw.14G021700 Carya illinoinensis HOM05D000393 ORTHO05D000275 6.2e-07 57.0 63 49.2
Cc02_g24900 Coffea canephora HOM05D000393 ORTHO05D000275 6.2e-07 57.0 69 49.3
Gohir.A11G076300 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.2e-07 57.0 49 53.1
Gohir.A11G076600 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.2e-07 57.0 49 53.1
Sabra03G0049700 Salix brachista HOM05D000393 ORTHO05D000275 6.2e-07 57.0 70 50.0
Ciclev10021501m.g Citrus clementina HOM05D000393 ORTHO05D000275 8.1e-07 56.6 55 54.5
Hma1.2p1_2019F.1_g311240 Hydrangea macrophylla HOM05D000393 ORTHO05D000275 8.1e-07 56.6 76 47.4
CAN.G362.12 Capsicum annuum HOM05D000393 ORTHO05D000275 1.1e-06 56.2 74 43.2
Glyma.11G035900 Glycine max HOM05D000393 ORTHO05D000275 1.1e-06 56.2 69 53.6
Gohir.D08G186400 Gossypium hirsutum HOM05D000393 ORTHO05D000275 1.1e-06 56.2 67 50.7
Gorai.004G195900 Gossypium raimondii HOM05D000393 ORTHO05D000275 1.1e-06 56.2 67 50.7
Lalb_Chr16g0379461 Lupinus albus HOM05D000393 ORTHO05D000275 1.1e-06 56.2 70 47.1
MD02G1216800 Malus domestica HOM05D000393 ORTHO05D000275 1.1e-06 56.2 72 50.0
CiPaw.13G028000 Carya illinoinensis HOM05D000393 ORTHO05D000275 1.4e-06 55.8 75 45.3
Hma1.2p1_1196F.1_g266020 Hydrangea macrophylla HOM05D000393 ORTHO05D000275 1.4e-06 55.8 66 48.5
Hma1.2p1_1335F.1_g276360 Hydrangea macrophylla HOM05D000393 ORTHO05D000275 1.4e-06 55.8 66 48.5
Oeu040698.1 Olea europaea HOM05D000393 ORTHO05D000275 1.4e-06 55.8 65 49.2
Potri.003G079800 Populus trichocarpa HOM05D000393 ORTHO05D000275 1.4e-06 55.8 73 47.9
PGSC0003DMG402012500 Solanum tuberosum HOM05D000393 ORTHO05D000275 1.4e-06 55.8 70 44.3
Duzib133G1100 Durio zibethinus HOM05D000393 ORTHO05D000275 1.8e-06 55.5 75 42.7
Glyma.01G207300 Glycine max HOM05D000393 ORTHO05D000275 1.8e-06 55.5 66 54.5
Manes.02G041800 Manihot esculenta HOM05D000393 ORTHO05D000275 1.8e-06 55.5 68 52.9
Sed0004303 Sechium edule HOM05D000393 ORTHO05D000275 1.8e-06 55.5 61 52.5
Manes.01G272100 Manihot esculenta HOM05D000393 ORTHO05D000275 2.3e-06 55.1 72 47.2
CiPaw.11G082700 Carya illinoinensis HOM05D000393 ORTHO05D000275 3.1e-06 54.7 69 46.4
Gohir.A12G215000 Gossypium hirsutum HOM05D000393 ORTHO05D000275 3.1e-06 54.7 68 48.5
Solyc08g007270.4 Solanum lycopersicum HOM05D000393 ORTHO05D000275 3.1e-06 54.7 68 47.1
TWI60G1534 Tripterygium wilfordii HOM05D000393 ORTHO05D000275 3.1e-06 54.7 66 47.0
Dinv21669 Davidia involucrata HOM05D000393 ORTHO05D000275 4.0e-06 54.3 67 49.3
Medtr4g100550 Medicago truncatula HOM05D000393 ORTHO05D000275 4.0e-06 54.3 53 52.8
Cfa011090 Carpinus fangiana HOM05D000393 ORTHO05D000275 5.2e-06 53.9 75 48.0
AUR62019992 Chenopodium quinoa HOM05D000393 ORTHO05D000275 5.2e-06 53.9 80 42.5
ClCG05G000400 Citrullus lanatus HOM05D000393 ORTHO05D000275 5.2e-06 53.9 53 56.6
COL.COLO4_12429 Corchorus olitorius HOM05D000393 ORTHO05D000275 5.2e-06 53.9 70 48.6
FvH4_5g19570 Fragaria vesca HOM05D000393 ORTHO05D000275 5.2e-06 53.9 63 50.8
PGR042G3804 Punica granatum HOM05D000393 ORTHO05D000275 5.2e-06 53.9 65 49.2
FAN18G3355 Fragaria x ananassa HOM05D000393 ORTHO05D000275 6.8e-06 53.5 61 50.8
Medtr8g006705 Medicago truncatula HOM05D000393 ORTHO05D000275 6.8e-06 53.5 56 53.6
Psat2g177440 Pisum sativum HOM05D000393 ORTHO05D000275 6.8e-06 53.5 63 50.8
Potri.002G136400 Populus trichocarpa HOM05D000393 ORTHO05D000275 6.8e-06 53.5 70 47.1
RcHm_v2.0_Chr7g0204271 Rosa chinensis HOM05D000393 ORTHO05D000275 6.8e-06 53.5 74 45.9
FAN08G1066 Fragaria x ananassa HOM05D000393 ORTHO05D000275 8.9e-06 53.1 62 58.1
Hund14523 Selenicereus undatus HOM05D000393 ORTHO05D000275 8.9e-06 53.1 65 46.2


User provided reference genes

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