Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062964.1 Olea europaea HOM05D001502 ORTHO05D002950 3.0e-92 342.0 197 100.0
Oeu019190.1 Olea europaea HOM05D001502 ORTHO05D002950 1.0e-31 141.0 89 76.4
Duzib068G0032 Durio zibethinus HOM05D001502 ORTHO05D002950 2.8e-26 122.9 85 70.6
CiPaw.12G093300 Carya illinoinensis HOM05D001502 ORTHO05D002950 4.8e-26 122.1 93 64.5
Dinv38944 Davidia involucrata HOM05D001502 ORTHO05D002950 8.2e-26 121.3 90 67.8
Lalb_Chr16g0389971 Lupinus albus HOM05D001502 ORTHO05D002950 1.1e-25 120.9 98 61.2
Thecc.03G278600 Theobroma cacao HOM05D001502 ORTHO05D002950 1.8e-25 120.2 85 70.6
Gohir.D08G201100 Gossypium hirsutum HOM05D001502 ORTHO05D002950 3.1e-25 119.4 85 69.4
Gorai.004G212000 Gossypium raimondii HOM05D001502 ORTHO05D002950 3.1e-25 119.4 85 69.4
Gohir.A08G182600 Gossypium hirsutum HOM05D001502 ORTHO05D002950 4.1e-25 119.0 85 69.4
Actinidia33752 Actinidia chinensis HOM05D001502 ORTHO05D002950 5.3e-25 118.6 92 65.2
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 5.3e-25 118.6 85 68.2
TAR629G2340 Trochodendron aralioides HOM05D001502 ORTHO05D002950 1.2e-24 117.5 92 63.0
VMungo0251G3461 Vigna mungo HOM05D001502 ORTHO05D002950 1.2e-24 117.5 98 58.2
MSTRG.13843 Avicennia marina HOM05D001502 ORTHO05D002950 4.5e-24 115.5 89 64.0
CAN.G1842.1 Capsicum annuum HOM05D001502 ORTHO05D002950 7.7e-24 114.8 94 61.7
Glyma.08G014500 Glycine max HOM05D001502 ORTHO05D002950 7.7e-24 114.8 98 58.2
Lj2A192G36 Lonicera japonica HOM05D001502 ORTHO05D002950 7.7e-24 114.8 85 64.7
Sabra01G0078700 Salix brachista HOM05D001502 ORTHO05D002950 7.7e-24 114.8 85 67.1
CAN.G774.33 Capsicum annuum HOM05D001502 ORTHO05D002950 1.0e-23 114.4 94 61.7
CAN.G774.34 Capsicum annuum HOM05D001502 ORTHO05D002950 1.3e-23 114.0 94 60.6
Hma1.2p1_0896F.1_g234010 Hydrangea macrophylla HOM05D001502 ORTHO05D002950 1.7e-23 113.6 84 65.5
CSS0008990 Camellia sinensis var. sinensis HOM05D001502 ORTHO05D002950 2.2e-23 113.2 84 67.9
CSS0043015 Camellia sinensis var. sinensis HOM05D001502 ORTHO05D002950 2.2e-23 113.2 84 67.9
CAN.G774.38 Capsicum annuum HOM05D001502 ORTHO05D002950 2.2e-23 113.2 85 63.5
CAN.G774.37 Capsicum annuum HOM05D001502 ORTHO05D002950 2.9e-23 112.8 94 60.6
Ca_24551_v3 Cicer arietinum L. HOM05D001502 ORTHO05D002950 6.5e-23 111.7 119 48.7
Glyma.05G207800 Glycine max HOM05D001502 ORTHO05D002950 6.5e-23 111.7 98 57.1
TAR375G0676 Trochodendron aralioides HOM05D001502 ORTHO05D002950 6.5e-23 111.7 91 62.6
Manes.01G061900 Manihot esculenta HOM05D001502 ORTHO05D002950 1.1e-22 110.9 85 62.4
Nn6g33451 Nelumbo nucifera HOM05D001502 ORTHO05D002950 1.1e-22 110.9 81 65.4
CAN.G774.29 Capsicum annuum HOM05D001502 ORTHO05D002950 1.4e-22 110.5 85 62.4
PGSC0003DMG400012341 Solanum tuberosum HOM05D001502 ORTHO05D002950 1.4e-22 110.5 94 61.7
CAN.G774.28 Capsicum annuum HOM05D001502 ORTHO05D002950 1.9e-22 110.2 94 59.6
CiPaw.11G135500 Carya illinoinensis HOM05D001502 ORTHO05D002950 1.9e-22 110.2 80 66.2
Duzib205G1526 Durio zibethinus HOM05D001502 ORTHO05D002950 1.9e-22 110.2 85 63.5
Phvul.002G289400 Phaseolus vulgaris HOM05D001502 ORTHO05D002950 1.9e-22 110.2 80 63.8
QL12p033043 Quercus lobata HOM05D001502 ORTHO05D002950 2.5e-22 109.8 80 65.0
Nitab4.5_0010968g0020 Nicotiana tabacum HOM05D001502 ORTHO05D002950 4.2e-22 109.0 97 57.7
Phvul.002G157900 Phaseolus vulgaris HOM05D001502 ORTHO05D002950 4.2e-22 109.0 93 61.3
VMungo1215G2558 Vigna mungo HOM05D001502 ORTHO05D002950 4.2e-22 109.0 93 61.3
Atru.chr9.2191 Acer truncatum HOM05D001502 ORTHO05D002950 5.5e-22 108.6 80 65.0
Glyma.01G220200 Glycine max HOM05D001502 ORTHO05D002950 5.5e-22 108.6 93 59.1
MSTRG.25606 Avicennia marina HOM05D001502 ORTHO05D002950 7.2e-22 108.2 70 72.9
Potri.003G127400 Populus trichocarpa HOM05D001502 ORTHO05D002950 7.2e-22 108.2 85 63.5
Manes.02G022300 Manihot esculenta HOM05D001502 ORTHO05D002950 9.4e-22 107.8 93 58.1
Lalb_Chr09g0320961 Lupinus albus HOM05D001502 ORTHO05D002950 1.2e-21 107.5 92 60.9
Sed0021720 Sechium edule HOM05D001502 ORTHO05D002950 1.2e-21 107.5 89 61.8
VMungo1215G0294 Vigna mungo HOM05D001502 ORTHO05D002950 1.2e-21 107.5 93 62.4
Sopen08g029370 Solanum pennellii HOM05D001502 ORTHO05D002950 1.6e-21 107.1 94 59.6
Nitab4.5_0001315g0080 Nicotiana tabacum HOM05D001502 ORTHO05D002950 2.1e-21 106.7 97 56.7
Rhsim02G0231100 Rhododendron simsii HOM05D001502 ORTHO05D002950 2.1e-21 106.7 88 60.2
Nitab4.5_0001615g0190 Nicotiana tabacum HOM05D001502 ORTHO05D002950 2.7e-21 106.3 97 56.7
arahy.Tifrunner.gnm1.ann1.T4KI49 Arachis hypogaea HOM05D001502 ORTHO05D002950 3.6e-21 105.9 90 55.6
Peaxi162Scf00119g00829 Petunia axillaris HOM05D001502 ORTHO05D002950 3.6e-21 105.9 87 62.1
SalBow1G7558 Salvia bowleyana HOM05D001502 ORTHO05D002950 3.6e-21 105.9 90 64.4
TPR.G16303 Trifolium pratense HOM05D001502 ORTHO05D002950 3.6e-21 105.9 117 51.3
GSVIVG01019755001 Vitis vinifera HOM05D001502 ORTHO05D002950 3.6e-21 105.9 92 58.7
MELO3C005675.2 Cucumis melo HOM05D001502 ORTHO05D002950 6.1e-21 105.1 76 67.1
CsaV3_5G002820 Cucumis sativus L. HOM05D001502 ORTHO05D002950 6.1e-21 105.1 76 67.1
TPR.G12968 Trifolium pratense HOM05D001502 ORTHO05D002950 6.1e-21 105.1 98 54.1
TPR.G6654 Trifolium pratense HOM05D001502 ORTHO05D002950 6.1e-21 105.1 121 48.8
arahy.Tifrunner.gnm1.ann1.RBC6WC Arachis hypogaea HOM05D001502 ORTHO05D002950 1.0e-20 104.4 90 55.6
Thhalv10028529m.g Eutrema salsugineum HOM05D001502 ORTHO05D002950 1.0e-20 104.4 76 65.8
Glyma.11G023500 Glycine max HOM05D001502 ORTHO05D002950 1.0e-20 104.4 88 59.1
Gohir.A11G022300 Gossypium hirsutum HOM05D001502 ORTHO05D002950 1.0e-20 104.4 85 63.5
Gohir.D11G022000 Gossypium hirsutum HOM05D001502 ORTHO05D002950 1.0e-20 104.4 85 63.5
Gorai.007G023400 Gossypium raimondii HOM05D001502 ORTHO05D002950 1.0e-20 104.4 85 63.5
Hma1.2p1_2966F.1_g330990 Hydrangea macrophylla HOM05D001502 ORTHO05D002950 1.0e-20 104.4 91 59.3
LjContig00312_ERROPOS870357g0010973 Lotus japonicus HOM05D001502 ORTHO05D002950 1.0e-20 104.4 85 61.2
Ciclev10019291m.g Citrus clementina HOM05D001502 ORTHO05D002950 1.4e-20 104.0 80 62.5
Lj4g0001385 Lotus japonicus HOM05D001502 ORTHO05D002950 1.4e-20 104.0 98 55.1
Medtr5g010190 Medicago truncatula HOM05D001502 ORTHO05D002950 1.4e-20 104.0 85 60.0
vmacro11332 Vaccinium macrocarpon HOM05D001502 ORTHO05D002950 1.4e-20 104.0 88 59.1
Migut.E01091 Erythranthe guttata HOM05D001502 ORTHO05D002950 1.8e-20 103.6 100 56.0
SGA_v2.0_scaffold173G39192 Striga asiatica HOM05D001502 ORTHO05D002950 3.9e-20 102.4 90 56.7
BcaB05g23821 Brassica carinata HOM05D001502 ORTHO05D002950 5.1e-20 102.1 95 57.9
CARHR254850 Cardamine hirsuta HOM05D001502 ORTHO05D002950 5.1e-20 102.1 90 60.0
Ca_17534_v3 Cicer arietinum L. HOM05D001502 ORTHO05D002950 5.1e-20 102.1 98 52.0
Medtr8g098260 Medicago truncatula HOM05D001502 ORTHO05D002950 5.1e-20 102.1 98 54.1
PGR042G2965 Punica granatum HOM05D001502 ORTHO05D002950 5.1e-20 102.1 78 66.7
ClCG01G002730 Citrullus lanatus HOM05D001502 ORTHO05D002950 6.7e-20 101.7 76 65.8
Eucgr.E00595 Eucalyptus grandis HOM05D001502 ORTHO05D002950 6.7e-20 101.7 84 60.7
Lalb_Chr09g0320971 Lupinus albus HOM05D001502 ORTHO05D002950 6.7e-20 101.7 67 71.6
Carub.0006s3060 Capsella rubella HOM05D001502 ORTHO05D002950 8.8e-20 101.3 87 59.8
Psat2g182400 Pisum sativum HOM05D001502 ORTHO05D002950 8.8e-20 101.3 85 58.8
BcaC01g04626 Brassica carinata HOM05D001502 ORTHO05D002950 1.5e-19 100.5 98 54.1
Hma1.2p1_0792F.1_g218570 Hydrangea macrophylla HOM05D001502 ORTHO05D002950 1.5e-19 100.5 89 58.4
Sp6g05920 Schrenkiella parvula HOM05D001502 ORTHO05D002950 1.5e-19 100.5 76 64.5
DCAR_000610 Daucus carota HOM05D001502 ORTHO05D002950 2.0e-19 100.1 92 56.5
BraA02t07622Z Brassica rapa HOM05D001502 ORTHO05D002950 2.6e-19 99.8 105 51.4
Sed0014228 Sechium edule HOM05D001502 ORTHO05D002950 2.6e-19 99.8 67 71.6
TWI60G1236 Tripterygium wilfordii HOM05D001502 ORTHO05D002950 2.6e-19 99.8 78 62.8
THA.LOC104813019 Tarenaya hassleriana HOM05D001502 ORTHO05D002950 3.3e-19 99.4 80 60.0
AL6G46080 Arabidopsis lyrata HOM05D001502 ORTHO05D002950 4.4e-19 99.0 97 55.7
BolC3t15864H Brassica oleracea HOM05D001502 ORTHO05D002950 4.4e-19 99.0 80 65.0
Migut.A00766 Erythranthe guttata HOM05D001502 ORTHO05D002950 4.4e-19 99.0 67 70.1
BcaB01g02692 Brassica carinata HOM05D001502 ORTHO05D002950 5.7e-19 98.6 104 50.0
Sc22g0005600 Simmondsia chinensis HOM05D001502 ORTHO05D002950 5.7e-19 98.6 94 55.3
Prupe.5G100000 Prunus persica HOM05D001502 ORTHO05D002950 7.4e-19 98.2 105 55.2
RcHm_v2.0_Chr7g0197721 Rosa chinensis HOM05D001502 ORTHO05D002950 7.4e-19 98.2 85 56.5
FAN04G2422 Fragaria x ananassa HOM05D001502 ORTHO05D002950 9.7e-19 97.8 71 67.6
FAN13G3007 Fragaria x ananassa HOM05D001502 ORTHO05D002950 9.7e-19 97.8 71 67.6
FAN08G1592 Fragaria x ananassa HOM05D001502 ORTHO05D002950 1.3e-18 97.4 71 67.6
Lsat_1_v5_gn_6_6481 Lactuca sativa HOM05D001502 ORTHO05D002950 1.3e-18 97.4 84 60.7
AT4G11560 Arabidopsis thaliana HOM05D001502 ORTHO05D002950 1.7e-18 97.1 76 64.5
MD06G1082900 Malus domestica HOM05D001502 ORTHO05D002950 1.7e-18 97.1 85 56.5
arahy.Tifrunner.gnm1.ann1.HI8SJE Arachis hypogaea HOM05D001502 ORTHO05D002950 2.2e-18 96.7 68 66.2
arahy.Tifrunner.gnm1.ann1.W3TBCC Arachis hypogaea HOM05D001502 ORTHO05D002950 2.2e-18 96.7 68 66.2
Medtr8g098290 Medicago truncatula HOM05D001502 ORTHO05D002950 2.2e-18 96.7 75 62.7
SGA_v2.0_scaffold479G52245 Striga asiatica HOM05D001502 ORTHO05D002950 2.2e-18 96.7 101 51.5
Actinidia02007 Actinidia chinensis HOM05D001502 ORTHO05D002950 3.7e-18 95.9 94 56.4
HanXRQChr07g0189841 Helianthus annuus HOM05D001502 ORTHO05D002950 3.7e-18 95.9 82 59.8
SGA_v2.0_scaffold96G28937 Striga asiatica HOM05D001502 ORTHO05D002950 3.7e-18 95.9 85 58.8
EL10Ac5g13060 Beta vulgaris HOM05D001502 ORTHO05D002950 6.3e-18 95.1 93 51.6
MD14G1104300 Malus domestica HOM05D001502 ORTHO05D002950 8.2e-18 94.7 99 51.5
Hund11470 Selenicereus undatus HOM05D001502 ORTHO05D002950 8.2e-18 94.7 84 58.3
TWI81G0062 Tripterygium wilfordii HOM05D001502 ORTHO05D002950 8.2e-18 94.7 78 60.3
unitig_88.g27614 Utricularia gibba HOM05D001502 ORTHO05D002950 8.2e-18 94.7 81 58.0
CANSAT21G0813 Cannabis sativa HOM05D001502 ORTHO05D002950 1.1e-17 94.4 81 58.0
THA.LOC104814493 Tarenaya hassleriana HOM05D001502 ORTHO05D002950 1.1e-17 94.4 78 55.1
FAN18G4468 Fragaria x ananassa HOM05D001502 ORTHO05D002950 1.8e-17 93.6 71 66.2
Aa31LG9G10750 Aethionema arabicum HOM05D001502 ORTHO05D002950 2.4e-17 93.2 81 54.3
FvH4_5g02390 Fragaria vesca HOM05D001502 ORTHO05D002950 2.4e-17 93.2 71 66.2
ECA233G0801 Erigeron canadensis HOM05D001502 ORTHO05D002950 3.1e-17 92.8 65 67.7
Ah.12g056920 Amaranthus hybridus HOM05D001502 ORTHO05D002950 4.1e-17 92.4 78 60.3
AUR62010679 Chenopodium quinoa HOM05D001502 ORTHO05D002950 4.1e-17 92.4 85 56.5
AUR62017203 Chenopodium quinoa HOM05D001502 ORTHO05D002950 5.3e-17 92.0 85 56.5
Ciclev10003744m.g Citrus clementina HOM05D001502 ORTHO05D002950 5.3e-17 92.0 72 62.5
BcaC04g21076 Brassica carinata HOM05D001502 ORTHO05D002950 9.1e-17 91.3 80 57.5
BcaC04g21078 Brassica carinata HOM05D001502 ORTHO05D002950 9.1e-17 91.3 80 57.5
BcaB01g01539 Brassica carinata HOM05D001502 ORTHO05D002950 1.5e-16 90.5 102 45.1
Nitab4.5_0023620g0010 Nicotiana tabacum HOM05D001502 ORTHO05D002950 1.5e-16 90.5 89 50.6
PSO170G6703 Papaver somniferum HOM05D001502 ORTHO05D002950 3.5e-16 89.4 65 66.2
BcaC04g21150 Brassica carinata HOM05D001502 ORTHO05D002950 4.5e-16 89.0 70 61.4
BolC9t56342H Brassica oleracea HOM05D001502 ORTHO05D002950 4.5e-16 89.0 70 61.4
BraA09t38328Z Brassica rapa HOM05D001502 ORTHO05D002950 4.5e-16 89.0 70 61.4
BcaB01g01656 Brassica carinata HOM05D001502 ORTHO05D002950 7.7e-16 88.2 158 36.1
Cfa012182 Carpinus fangiana HOM05D001502 ORTHO05D002950 7.7e-16 88.2 80 58.8
Psat7g033280 Pisum sativum HOM05D001502 ORTHO05D002950 7.7e-16 88.2 80 53.8
ATR0680G298 Amborella trichopoda HOM05D001502 ORTHO05D002950 1.3e-15 87.4 139 36.7
BcaB01g01516 Brassica carinata HOM05D001502 ORTHO05D002950 1.3e-15 87.4 103 48.5
HanXRQChr07g0187221 Helianthus annuus HOM05D001502 ORTHO05D002950 1.3e-15 87.4 92 55.4
BcaC03g14142 Brassica carinata HOM05D001502 ORTHO05D002950 1.7e-15 87.0 70 61.4
BolC2t07531H Brassica oleracea HOM05D001502 ORTHO05D002950 1.7e-15 87.0 70 61.4
CDE08G1696 Ceratophyllum demersum HOM05D001502 ORTHO05D002950 2.9e-15 86.3 81 50.6
Sabra03G0090400 Salix brachista HOM05D001502 ORTHO05D002950 3.8e-15 85.9 133 42.1
BraA09t38407Z Brassica rapa HOM05D001502 ORTHO05D002950 8.5e-15 84.7 76 53.9
BraA09t38408Z Brassica rapa HOM05D001502 ORTHO05D002950 8.5e-15 84.7 76 53.9
unitig_0.g2859 Utricularia gibba HOM05D001502 ORTHO05D002950 1.5e-14 84.0 78 53.8
Aqoxy3G00056 Aquilegia oxysepala HOM05D001502 ORTHO05D002950 1.9e-14 83.6 78 53.8
SEGI_03884 Sequoiadendron giganteum HOM05D001502 ORTHO05D002950 1.2e-13 80.9 65 58.5
Pp3c1_20810 Physcomitrium patens HOM05D001502 ORTHO05D002950 1.6e-13 80.5 74 54.1
HPP92_025727 Vanilla planifolia HOM05D001502 ORTHO05D002950 2.1e-13 80.1 76 51.3
Potri.001G104300 Populus trichocarpa HOM05D001502 ORTHO05D002950 1.4e-12 77.4 59 62.7
AagrBONN_evm.TU.Sc2ySwM_344.901 Anthoceros agrestis HOM05D001502 ORTHO05D002950 8.8e-12 74.7 90 48.9
CARHR101270 Cardamine hirsuta HOM05D001502 ORTHO05D002950 1.1e-11 74.3 70 52.9
Os01g0527400 Oryza sativa ssp. japonica HOM05D001502 ORTHO05D002950 1.1e-11 74.3 64 53.1
BcaC03g16347 Brassica carinata HOM05D001502 ORTHO05D002950 1.5e-11 73.9 54 66.7
Pp3c14_3750 Physcomitrium patens HOM05D001502 ORTHO05D002950 2.0e-11 73.6 101 40.6
Mapoly0111s0032 Marchantia polymorpha HOM05D001502 ORTHO05D002950 1.3e-10 70.9 65 50.8
Cpa.g.sc74.47 Carica papaya HOM05D001502 ORTHO05D002950 2.4e-09 66.6 64 57.8
AL4G16290 Arabidopsis lyrata HOM05D001502 ORTHO05D002950 1.6e-08 63.9 80 41.2
AL7G30360 Arabidopsis lyrata HOM05D001502 ORTHO05D002950 2.6e-08 63.2 76 40.8
Haze_08835 Corylus avellana HOM05D001502 ORTHO05D002950 3.5e-08 62.8 76 46.1
PSO724G0222 Papaver somniferum HOM05D001502 ORTHO05D002950 5.9e-08 62.0 66 45.5
SMO353G0270 Selaginella moellendorffii HOM05D001502 ORTHO05D002950 5.9e-08 62.0 64 50.0
SMO364G0341 Selaginella moellendorffii HOM05D001502 ORTHO05D002950 5.9e-08 62.0 64 50.0
CBR_g52340 Chara braunii HOM05D001502 ORTHO05D002950 2.9e-07 59.7 63 46.0
PSO729G0025 Papaver somniferum HOM05D001502 ORTHO05D002950 5.0e-07 58.9 66 43.9
Actinidia27382 Actinidia chinensis HOM05D001502 ORTHO05D002950 6.5e-07 58.5 35 80.0
PSO675G1241 Papaver somniferum HOM05D001502 ORTHO05D002950 6.5e-07 58.5 66 45.5
PSO675G2714 Papaver somniferum HOM05D001502 ORTHO05D002950 8.5e-07 58.2 66 45.5
PSO732G0359 Papaver somniferum HOM05D001502 ORTHO05D002950 1.5e-06 57.4 66 43.9
SEGI_09158 Sequoiadendron giganteum HOM05D001502 ORTHO05D002950 1.9e-06 57.0 39 64.1
Medtr6g464540 Medicago truncatula HOM05D001502 ORTHO05D002950 9.4e-06 54.7 63 41.3
SGA_v2.0_scaffold6G03380 Striga asiatica HOM05D001502 ORTHO05D403056 9.4e-06 54.7 70 42.9


User provided reference genes

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