Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 2.3e-72 275.4 135 100.0
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 3.3e-58 228.4 141 79.4
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 5.6e-58 227.6 141 80.9
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 9.5e-58 226.9 141 80.9
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 1.2e-57 226.5 141 79.4
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 1.6e-57 226.1 141 80.9
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 1.6e-57 226.1 141 80.9
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 1.6e-57 226.1 141 80.9
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 1.8e-56 222.6 141 78.7
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 4.0e-56 221.5 141 78.0
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 2.6e-55 218.8 141 78.0
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.9e-54 215.3 141 75.9
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 2.9e-54 215.3 141 75.9
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 2.9e-54 215.3 141 75.9
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.9e-54 215.3 141 75.9
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 6.4e-54 214.2 134 77.6
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 1.9e-53 212.6 141 75.2
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 5.4e-53 211.1 141 73.8
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 9.2e-53 210.3 141 73.0
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 1.2e-52 209.9 141 73.0
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 1.6e-52 209.5 141 72.3
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.7e-52 208.8 141 73.0
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 2.7e-52 208.8 141 77.3
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 7.8e-52 207.2 141 72.3
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-51 206.8 129 79.1
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 3.0e-51 205.3 142 72.5
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 3.0e-51 205.3 141 74.5
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 5.0e-51 204.5 141 73.8
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 6.6e-51 204.1 129 79.1
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 1.9e-50 202.6 129 79.1
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 4.3e-50 201.4 141 73.0
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 5.6e-50 201.1 129 76.7
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 7.3e-50 200.7 141 70.9
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 2.8e-49 198.7 129 79.1
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 4.7e-49 198.0 141 72.3
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 1.1e-48 196.8 141 70.9
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 1.1e-48 196.8 141 70.9
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 1.1e-48 196.8 141 70.9
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.8e-48 196.1 141 69.5
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 5.2e-48 194.5 141 69.5
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 2.6e-47 192.2 141 66.7
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 4.9e-46 188.0 146 67.8
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 6.4e-46 187.6 132 71.2
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 1.9e-45 186.0 146 67.1
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 7.1e-45 184.1 145 67.6
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.0e-43 180.3 129 71.3
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 8.6e-43 177.2 141 68.1
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 4.7e-41 171.4 130 68.5
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 3.4e-39 165.2 121 69.4
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 4.4e-39 164.9 149 59.7
Hund28761 Selenicereus undatus HOM05D002578 ORTHO05D005154 7.6e-39 164.1 141 63.1
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 9.9e-39 163.7 137 62.0
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 5.4e-37 157.9 164 55.5
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.1e-36 156.0 148 60.1
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 3.3e-34 148.7 96 76.0
Sed0004436 Sechium edule HOM05D002578 ORTHO05D005154 3.3e-34 148.7 132 60.6
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 4.3e-34 148.3 141 58.2
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 2.1e-33 146.0 137 57.7
Potri.017G072340 Populus trichocarpa HOM05D002578 ORTHO05D005154 2.8e-33 145.6 141 56.7
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 8.1e-33 144.1 118 65.3
Gohir.D06G105066 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.4e-32 143.3 134 58.2
MELO3C004853.2 Cucumis melo HOM05D002578 ORTHO05D005154 3.1e-32 142.1 134 57.5
Nn4g25225 Nelumbo nucifera HOM05D002578 ORTHO05D005154 4.2e-29 131.7 94 74.5
Lalb_Chr17g0337521 Lupinus albus HOM05D002578 ORTHO05D005154 5.4e-29 131.3 114 60.5
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 7.1e-29 131.0 137 53.3
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 3.0e-27 125.6 95 67.4
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 5.1e-27 124.8 148 48.6
AL2G20530 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 5.6e-26 121.3 82 70.7
AL2G21750 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 5.6e-26 121.3 82 70.7
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 7.3e-26 120.9 141 52.5
AL1G45070 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 9.6e-26 120.6 82 70.7
Gohir.A09G101600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.6e-25 119.8 91 67.0
Gorai.011G034100 Gossypium raimondii HOM05D002578 ORTHO05D005154 1.6e-25 119.8 91 67.0
Sc16g0004460 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.6e-25 119.8 82 72.0
Gohir.A12G090125 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.8e-25 119.0 82 69.5
Gorai.012G056700 Gossypium raimondii HOM05D002578 ORTHO05D005154 9.0e-24 114.0 82 65.9
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 1.5e-23 113.2 73 78.1
Gohir.D04G051050 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.3e-22 110.2 82 63.4
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 1.4e-21 106.7 57 86.0
PGSC0003DMG400003499 Solanum tuberosum HOM05D002578 ORTHO05D005154 3.2e-21 105.5 55 87.3
Ah.10g027320 Amaranthus hybridus HOM05D002578 ORTHO05D005154 1.6e-20 103.2 64 73.4
Ciclev10006396m.g Citrus clementina HOM05D002578 ORTHO05D005154 3.5e-20 102.1 67 73.1
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 4.6e-20 101.7 69 75.4
Gohir.D01G102164 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.8e-19 99.8 64 70.3
Aqoxy5G00925 Aquilegia oxysepala HOM05D002578 ORTHO05D005154 1.5e-18 96.7 84 59.5
QL93p1043_0025 Quercus lobata HOM05D002578 ORTHO05D005154 4.3e-18 95.1 66 71.2
Solyc09g050066.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 4.3e-18 95.1 64 73.4
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 7.4e-18 94.4 48 85.4
arahy.Tifrunner.gnm1.ann1.EHS3F0 Arachis hypogaea HOM05D002578 ORTHO05D005154 9.6e-18 94.0 61 72.1
SMO086G0021 Selaginella moellendorffii HOM05D002578 ORTHO05D005154 3.6e-17 92.0 148 35.8
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 5.3e-16 88.2 72 62.5
Lsat_1_v5_gn_5_168100 Lactuca sativa HOM05D002578 ORTHO05D005154 6.9e-16 87.8 85 57.6
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 1.2e-15 87.0 54 74.1
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 2.9e-14 82.4 61 68.9
HanXRQChr00c0593g0576401 Helianthus annuus HOM05D002578 ORTHO05D005154 4.9e-14 81.6 45 84.4
HanXRQChr11g0321131 Helianthus annuus HOM05D002578 ORTHO05D005154 4.9e-14 81.6 45 84.4
Lalb_Chr23g0274261 Lupinus albus HOM05D002578 ORTHO05D005154 8.4e-14 80.9 64 62.5
BraSC58t46504Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-13 80.5 49 73.5
HanXRQChr16g0503681 Helianthus annuus HOM05D002578 ORTHO05D005154 3.2e-13 79.0 89 50.6
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 3.2e-13 79.0 63 61.9
ATR0306G002 Amborella trichopoda HOM05D002578 ORTHO05D005154 5.5e-13 78.2 48 75.0
Solyc00g500153.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 4.6e-12 75.1 45 75.6
Lj2P1237T124 Lonicera japonica HOM05D002578 ORTHO05D005154 6.0e-12 74.7 44 77.3
Lj2P1239T79 Lonicera japonica HOM05D002578 ORTHO05D005154 6.0e-12 74.7 44 77.3
Lju5009P0T57 Lonicera japonica HOM05D002578 ORTHO05D005154 6.0e-12 74.7 44 77.3
Lalb_Chr23g0274271 Lupinus albus HOM05D002578 ORTHO05D005154 1.3e-11 73.6 56 66.1
AL5G19940 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 1.8e-11 73.2 45 73.3
Eucgr.E01404 Eucalyptus grandis HOM05D002578 ORTHO05D005154 1.8e-11 73.2 45 73.3
Psat3g190920 Pisum sativum HOM05D002578 ORTHO05D005154 1.8e-11 73.2 78 52.6
Psat5g168200 Pisum sativum HOM05D002578 ORTHO05D005154 2.3e-11 72.8 78 51.3
Lsat_1_v5_gn_5_168120 Lactuca sativa HOM05D002578 ORTHO05D005154 1.5e-10 70.1 45 73.3
arahy.Tifrunner.gnm1.ann1.HB4K1E Arachis hypogaea HOM05D002578 ORTHO05D005154 4.3e-10 68.6 37 83.8
Gohir.A02G112702 Gossypium hirsutum HOM05D002578 ORTHO05D005154 5.6e-10 68.2 40 77.5
Nitab4.5_0001339g0110 Nicotiana tabacum HOM05D002578 ORTHO05D005154 5.6e-10 68.2 40 77.5
CsaV3_5G013710 Cucumis sativus L. HOM05D007755 ORTHO05D009866 2.4e-08 62.8 43 69.8
Eucgr.L01887 Eucalyptus grandis HOM05D002578 ORTHO05D005154 6.9e-08 61.2 32 84.4
Nn4g25226 Nelumbo nucifera HOM05D002578 ORTHO05D005154 6.9e-08 61.2 27 96.3
Nn7g37550 Nelumbo nucifera HOM05D002578 ORTHO05D005154 6.9e-08 61.2 27 96.3
Sc25g0002540 Simmondsia chinensis HOM05D002578 ORTHO05D001488 6.9e-08 61.2 41 68.3
Mapoly0015s0207 Marchantia polymorpha HOM05D002578 ORTHO05D005154 1.0e-06 57.4 56 46.4
Hund07448 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.2e-06 56.2 36 69.4


User provided reference genes

Program Settings