Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.3e-70 269.6 139 100.0
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 3.1e-56 221.9 143 81.8
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.7e-49 199.5 138 75.4
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 1.7e-49 199.5 143 70.6
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 4.9e-49 198.0 144 69.4
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.8e-48 196.1 144 68.1
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.2e-48 195.3 143 68.5
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.2e-48 195.3 143 68.5
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 1.2e-47 193.4 137 68.6
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 2.7e-47 192.2 138 68.8
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.0e-46 188.0 144 65.3
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 6.6e-46 187.6 131 72.5
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.5e-45 186.4 144 64.6
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 2.5e-45 185.7 143 65.0
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 3.3e-45 185.3 133 72.9
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 7.3e-45 184.1 138 66.7
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 1.2e-44 183.3 138 68.1
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.1e-44 182.6 137 66.4
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 2.1e-44 182.6 138 65.2
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 2.8e-44 182.2 142 63.4
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 2.8e-44 182.2 144 64.6
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 3.6e-44 181.8 144 65.3
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 6.2e-44 181.0 138 65.2
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 6.2e-44 181.0 138 66.7
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 8.0e-44 180.6 144 64.6
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.8e-43 179.5 144 61.8
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.8e-43 179.5 144 63.9
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 4.0e-43 178.3 142 61.3
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 5.2e-43 177.9 144 62.5
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 5.2e-43 177.9 146 61.6
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 8.9e-43 177.2 139 64.7
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.5e-42 176.4 146 61.6
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 2.0e-42 176.0 136 67.6
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 2.0e-42 176.0 136 65.4
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 2.6e-42 175.6 139 63.3
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 2.6e-42 175.6 139 61.9
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 4.4e-42 174.9 146 63.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 4.4e-42 174.9 132 65.9
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 5.8e-42 174.5 144 61.8
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 5.8e-42 174.5 130 67.7
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 5.8e-42 174.5 142 63.4
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 7.5e-42 174.1 143 62.2
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 9.8e-42 173.7 142 61.3
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 9.8e-42 173.7 139 63.3
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 1.3e-41 173.3 137 62.8
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 1.7e-41 172.9 143 61.5
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 2.2e-41 172.6 142 61.3
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 2.2e-41 172.6 138 62.3
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 2.9e-41 172.2 138 60.9
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 3.7e-41 171.8 131 65.6
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 3.7e-41 171.8 142 60.6
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.7e-41 171.8 142 60.6
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.7e-41 171.8 142 60.6
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.7e-41 171.8 142 60.6
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 3.7e-41 171.8 142 62.0
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.9e-41 171.4 144 59.0
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 4.9e-41 171.4 134 67.2
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 4.9e-41 171.4 143 61.5
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 6.4e-41 171.0 133 63.9
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 6.4e-41 171.0 146 58.9
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.3e-41 170.6 142 59.9
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 8.3e-41 170.6 143 60.8
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 8.3e-41 170.6 130 66.9
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.1e-40 170.2 142 62.0
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.1e-40 170.2 135 64.4
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 1.4e-40 169.9 140 60.7
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.4e-40 169.9 142 59.9
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 1.4e-40 169.9 142 60.6
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 1.9e-40 169.5 140 60.7
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 1.9e-40 169.5 146 60.3
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 2.4e-40 169.1 135 64.4
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 3.2e-40 168.7 135 62.2
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 3.2e-40 168.7 140 61.4
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 4.1e-40 168.3 144 58.3
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 5.4e-40 167.9 144 59.0
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 5.4e-40 167.9 144 59.0
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 5.4e-40 167.9 144 59.0
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 5.4e-40 167.9 146 58.2
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 5.4e-40 167.9 146 58.2
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 7.0e-40 167.5 144 59.0
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 7.0e-40 167.5 144 58.3
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 7.0e-40 167.5 142 60.6
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 7.0e-40 167.5 146 57.5
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 1.2e-39 166.8 144 57.6
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.6e-39 166.4 136 64.0
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.6e-39 166.4 140 59.3
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 2.0e-39 166.0 133 63.9
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 2.0e-39 166.0 146 56.8
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 2.7e-39 165.6 144 57.6
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 2.7e-39 165.6 144 57.6
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 4.6e-39 164.9 144 57.6
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 6.0e-39 164.5 140 58.6
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 6.0e-39 164.5 142 57.7
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 6.0e-39 164.5 142 57.7
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 6.0e-39 164.5 142 59.9
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 3.0e-38 162.2 144 57.6
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 5.0e-38 161.4 143 58.0
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 6.6e-38 161.0 131 63.4
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.1e-37 160.2 133 61.7
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 1.1e-37 160.2 146 56.8
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 1.5e-37 159.8 143 58.0
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 1.5e-37 159.8 136 61.8
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.9e-37 159.5 146 56.2
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.9e-37 159.5 131 62.6
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.6e-36 156.4 136 58.8
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 2.1e-36 156.0 137 57.7
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 2.8e-36 155.6 137 60.6
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 4.7e-36 154.8 144 59.7
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 6.2e-36 154.5 130 60.0
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 6.2e-36 154.5 131 57.3
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 6.8e-35 151.0 138 55.1
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.2e-34 150.2 173 48.0
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.9e-33 145.6 131 55.0
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 4.1e-32 141.7 133 54.9
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 4.6e-31 138.3 82 78.0
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 6.0e-31 137.9 122 56.6
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 8.6e-30 134.0 99 69.7
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 4.3e-29 131.7 103 67.0
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.2e-28 130.2 98 68.4
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 1.2e-28 130.2 98 68.4
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 8.1e-28 127.5 132 50.0
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 8.1e-28 127.5 98 66.3
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.4e-27 126.7 96 67.7
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.8e-27 126.3 104 65.4
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-26 123.2 110 56.4
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 1.5e-26 123.2 134 44.0
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.0e-26 122.9 140 51.4
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 4.9e-25 118.2 108 55.6
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 6.2e-20 101.3 135 42.2
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.8e-19 99.8 130 43.1
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 1.8e-19 99.8 84 63.1
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 1.8e-19 99.8 84 63.1
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 6.8e-19 97.8 132 36.4
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.1e-16 90.5 128 42.2
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.1e-16 90.5 136 38.2
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.4e-16 90.1 138 38.4
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 7.1e-08 61.2 54 57.4
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 1.6e-07 60.1 38 65.8
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 2.7e-07 59.3 77 37.7
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 3.5e-07 58.9 44 61.4
BcaC08g46242 Brassica carinata HOM05D004841 ORTHO05D005874 8.7e-06 54.3 40 60.0


User provided reference genes

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